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The map label for this gene is ywlF [H]

Identifier: 37521257

GI number: 37521257

Start: 1799976

End: 1800440

Strand: Reverse

Name: ywlF [H]

Synonym: gll1688

Alternate gene names: 37521257

Gene position: 1800440-1799976 (Counterclockwise)

Preceding gene: 37521261

Following gene: 37521255

Centisome position: 38.64

GC content: 63.23

Gene sequence:

>465_bases
ATGAAGCTTGTGATCGGCAGTGACCACGGCGCCTACGAACTCAAAGAAGAATTGAAAACCTGGCTTGGCGAGCACGAGTA
CGCTTTCGAAGACGTGGGCACCTACAACGGCGAGCGCTGCGACTACCCGCTGGTAGCTCAGAGCGTCGCCGAAAAGATCC
AGCGCGGCGAAGCGGATCGGGGCATCTTGCTGTGCGGCACCGGCATCGGCATCTCGATCGCCGCCAACAAATTCGACGGC
ATCCGCGCCGCCCTCGCCCACGATCACTACACCGCCCGCATGAGCCGCGAACACAACGACGCCAATGTGCTGGCCATGGG
CGGGCGGGTGCTCGGGCCGGAGGTGGCCAAGGACGTGCTCGAAACCTGGCTGAGCACCGAATTTGGCGGCGAGCGCCACC
AGCGCCGCCTCGATCAAATCCAGAGTTTCGAAGCGCCCAAGACCCCGCAAACCGTCGGCAGCTAA

Upstream 100 bases:

>100_bases
GTGGACCCTCTAGAAATAGCATGTTCCTTTCGCCTTTTTATCTGCGGGGACCGTTGCCCAAGCCGGTACAATCGGTGTGC
AGCAGTTGAGAGGACCCCGC

Downstream 100 bases:

>100_bases
GACGTGCGGCCCATGGACCTCAAGCTTGTGGCTCCCAGATCTCGGGTGTTATATTGAGTTCTCGTGGGCACGTCGCCTAG
TGGATATGGCACCTGACTAC

Product: ribose 5-phosphate epimerase

Products: D-ribulose 5-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKLVIGSDHGAYELKEELKTWLGEHEYAFEDVGTYNGERCDYPLVAQSVAEKIQRGEADRGILLCGTGIGISIAANKFDG
IRAALAHDHYTARMSREHNDANVLAMGGRVLGPEVAKDVLETWLSTEFGGERHQRRLDQIQSFEAPKTPQTVGS

Sequences:

>Translated_154_residues
MKLVIGSDHGAYELKEELKTWLGEHEYAFEDVGTYNGERCDYPLVAQSVAEKIQRGEADRGILLCGTGIGISIAANKFDG
IRAALAHDHYTARMSREHNDANVLAMGGRVLGPEVAKDVLETWLSTEFGGERHQRRLDQIQSFEAPKTPQTVGS
>Mature_154_residues
MKLVIGSDHGAYELKEELKTWLGEHEYAFEDVGTYNGERCDYPLVAQSVAEKIQRGEADRGILLCGTGIGISIAANKFDG
IRAALAHDHYTARMSREHNDANVLAMGGRVLGPEVAKDVLETWLSTEFGGERHQRRLDQIQSFEAPKTPQTVGS

Specific function: In Addition To Its Activity On D-Ribose 5-Phosphate It Probably Also Has Activity On D-Allose 6-Phosphate. [C]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=143, Percent_Identity=48.951048951049, Blast_Score=143, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: 5.3.1.6

Molecular weight: Translated: 16986; Mature: 16986

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVIGSDHGAYELKEELKTWLGEHEYAFEDVGTYNGERCDYPLVAQSVAEKIQRGEADR
CEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC
GILLCGTGIGISIAANKFDGIRAALAHDHYTARMSREHNDANVLAMGGRVLGPEVAKDVL
CEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECHHHHHHHH
ETWLSTEFGGERHQRRLDQIQSFEAPKTPQTVGS
HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKLVIGSDHGAYELKEELKTWLGEHEYAFEDVGTYNGERCDYPLVAQSVAEKIQRGEADR
CEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC
GILLCGTGIGISIAANKFDGIRAALAHDHYTARMSREHNDANVLAMGGRVLGPEVAKDVL
CEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECHHHHHHHH
ETWLSTEFGGERHQRRLDQIQSFEAPKTPQTVGS
HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 4.4 {D-ribose} 0.83 {D-ribose} [C]

Substrates: D-ribose 5-phosphate

Specific reaction: D-ribose 5-phosphate = D-ribulose 5-phosphate

General reaction: Intramolecular oxidoreduction; Isomerization [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]