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The map label for this gene is amy [H]

Identifier: 37521164

GI number: 37521164

Start: 1711223

End: 1713085

Strand: Reverse

Name: amy [H]

Synonym: gll1595

Alternate gene names: 37521164

Gene position: 1713085-1711223 (Counterclockwise)

Preceding gene: 37521165

Following gene: 37521154

Centisome position: 36.77

GC content: 62.8

Gene sequence:

>1863_bases
ATGGCAATCACCATCGAAGAGAAAGCTCCCCGCAAGCTCAGCGAAGCGGATCTGCGGCCGCGCGGCCAAGTGCATCCGAG
CCCGGCAAGCTGGCGCGATCAGTTTCTCTACCAGCTGTTGCCGGACCGCTTCAGCGACGGCCGCGAGGCGGATCGGCCGC
TTTTTGACCCGGCCGATCCGGCCCGATTCCAGGTCAAAGACAGAGGAGCCTGGATGGCGGCGGGGAAGCGATTCGTAGGT
GGAACCCTCAAAGGCGTCATCAGCAAGCTCGACTATCTGCAGGGGCTCGGGGTGACGACGCTGTGGCTCAACCCACCCTG
GAAGCAGCGAGCGGATCTGGAGACTTATCACGGCTACGGTATTCAGAACTTTTTCGACATCGATCCGCGCTTCGGGACCC
GCCAGGATCTGCGCGACTTGGTCGATGCCGCCCACGCACGGGGCCTGTACGTCATCCTCGATGTGATCTATAACCACAGC
GGCAACAACTGGTTCTACCGAGACGAATGGGACGGCAGCCCGCAATCGATGCGCCCCTACCGCTATGCGCCCGGCTATCC
GGTGCACGGTTGGCGCTCCGGCGACGGGCGCAGCGTGGGTGAGATTGTTTCTCTCGACGACGGCGTCTGGCCCGAGGAGT
TTCAAAACTTTGACTGGTACACCCGCGCCGGGCGGATCATCAACTGGAGCGAAGCGGCCTGGGAGGATTATCTGAGCCCC
CAGGTCGAATTTCGCCGGGGCGATTTTTTTGATCTCAAAGACTTCAACCTGGCCAATCCCGCCACCATCGCCGGTTTGGC
CCGCGTCTACCAGTACTGGATTGCCCTCAGTGACTGCGACGGATTTCGTGTCGATGCGGTCAAGCACGTCTCCCCTGTCG
AATCGCGCAAGTTCTGCGCGGCCATCAACGAGTATGCCCAGTCGATCGGCAAGGACAATTTTTTGCTCACCGGTGAACTC
ACCGACGACCGCATGCTGCTTGCCTACCTCGACATCGTCGGGCGCAACCTGGATGCGGCCCTCGACATCGTCAGCGCGCC
GATTCAGCTGACCGCCGCAGCCAAGGGCCTTGCTCACCCGGGCGCCTTCTTCGGTCTTTACGACGAGAACACCCTGGCGG
GCGCCTACCGCCAGAGCGGGCTTTATCATGTCTCGGTCCTCGACGATCACGACATGTCCTCGCGCAGCTACAAATCGCGC
TTTGCCGCCCACGGCGAAGGGGTGCCCAACCTTTACCGGCAGGTGGCCCACGCGGTCGGCGTGCAACTGACGATGCCCGG
TATTCCTTCGATTTACTACGGCACCGAACAGGCCCTGGACGGCTCCGAGAGCAACCACGACTACGGCATCGATGGGTCGC
ACGAATATGTCGATCGCTACGTGCGCGAAGCGATGTTCGGGGGTGCCTTTGGTGCCTTTCGCACCGAGGGTTGCCACTTT
TTCAACCCGGATCACCCTACCTATCTGCGCATCGCCGCCATCGCCCGCCTGCGCAACCGTCTGGACGCCGTCGGCAAAAC
CCTGCGCCGGGGGCATCACTACCTGCGGGAGACCTCGTTTGTCCACCGACCCTTTGTCCTCCCGGGGGCCGGCGAGCTGG
TGGCCTGGTCGCAAATTCTGTTCGAGACGGAGGCGCTGATGGTCCTCAACACCCACGGCCTGGAGAATCGAGGTGCCGAG
GTGACCGTCGAGACCTCGCTGCACCCGGAAGGTTCGTCGATGGCCGTCCTGTACCACAGCGAATGGAGCGACGACCAGCT
GCGTCAGCCGCCGTCGGCTCAGACCGTGCCTGTCGAGTATGGCCACGGTCGCGCCACGGTGCGCATCGACCTGCCCCCCT
GCGGCATGGTGATTCTGAGCTGA

Upstream 100 bases:

>100_bases
GTGGAGCTGGCCACCGGGGTGCCGATCGTCTACGAACTCGACAAAGCGGCCCACATGCTCAGCAAGGCCGTGCTCACCAA
CTGACCCCCCACCACCCACC

Downstream 100 bases:

>100_bases
GGCACAAGCTTCCACAAAAAACGGAGAGAGAGGGATTCGAACCCTCGATAGAGTTGCCCCTATACAGCATTTCCAGTGCT
GCGCCTTCGACCACTCGGCC

Product: alpha-amylase family protein

Products: NA

Alternate protein names: 1,4-alpha-D-glucan glucanohydrolase [H]

Number of amino acids: Translated: 620; Mature: 619

Protein sequence:

>620_residues
MAITIEEKAPRKLSEADLRPRGQVHPSPASWRDQFLYQLLPDRFSDGREADRPLFDPADPARFQVKDRGAWMAAGKRFVG
GTLKGVISKLDYLQGLGVTTLWLNPPWKQRADLETYHGYGIQNFFDIDPRFGTRQDLRDLVDAAHARGLYVILDVIYNHS
GNNWFYRDEWDGSPQSMRPYRYAPGYPVHGWRSGDGRSVGEIVSLDDGVWPEEFQNFDWYTRAGRIINWSEAAWEDYLSP
QVEFRRGDFFDLKDFNLANPATIAGLARVYQYWIALSDCDGFRVDAVKHVSPVESRKFCAAINEYAQSIGKDNFLLTGEL
TDDRMLLAYLDIVGRNLDAALDIVSAPIQLTAAAKGLAHPGAFFGLYDENTLAGAYRQSGLYHVSVLDDHDMSSRSYKSR
FAAHGEGVPNLYRQVAHAVGVQLTMPGIPSIYYGTEQALDGSESNHDYGIDGSHEYVDRYVREAMFGGAFGAFRTEGCHF
FNPDHPTYLRIAAIARLRNRLDAVGKTLRRGHHYLRETSFVHRPFVLPGAGELVAWSQILFETEALMVLNTHGLENRGAE
VTVETSLHPEGSSMAVLYHSEWSDDQLRQPPSAQTVPVEYGHGRATVRIDLPPCGMVILS

Sequences:

>Translated_620_residues
MAITIEEKAPRKLSEADLRPRGQVHPSPASWRDQFLYQLLPDRFSDGREADRPLFDPADPARFQVKDRGAWMAAGKRFVG
GTLKGVISKLDYLQGLGVTTLWLNPPWKQRADLETYHGYGIQNFFDIDPRFGTRQDLRDLVDAAHARGLYVILDVIYNHS
GNNWFYRDEWDGSPQSMRPYRYAPGYPVHGWRSGDGRSVGEIVSLDDGVWPEEFQNFDWYTRAGRIINWSEAAWEDYLSP
QVEFRRGDFFDLKDFNLANPATIAGLARVYQYWIALSDCDGFRVDAVKHVSPVESRKFCAAINEYAQSIGKDNFLLTGEL
TDDRMLLAYLDIVGRNLDAALDIVSAPIQLTAAAKGLAHPGAFFGLYDENTLAGAYRQSGLYHVSVLDDHDMSSRSYKSR
FAAHGEGVPNLYRQVAHAVGVQLTMPGIPSIYYGTEQALDGSESNHDYGIDGSHEYVDRYVREAMFGGAFGAFRTEGCHF
FNPDHPTYLRIAAIARLRNRLDAVGKTLRRGHHYLRETSFVHRPFVLPGAGELVAWSQILFETEALMVLNTHGLENRGAE
VTVETSLHPEGSSMAVLYHSEWSDDQLRQPPSAQTVPVEYGHGRATVRIDLPPCGMVILS
>Mature_619_residues
AITIEEKAPRKLSEADLRPRGQVHPSPASWRDQFLYQLLPDRFSDGREADRPLFDPADPARFQVKDRGAWMAAGKRFVGG
TLKGVISKLDYLQGLGVTTLWLNPPWKQRADLETYHGYGIQNFFDIDPRFGTRQDLRDLVDAAHARGLYVILDVIYNHSG
NNWFYRDEWDGSPQSMRPYRYAPGYPVHGWRSGDGRSVGEIVSLDDGVWPEEFQNFDWYTRAGRIINWSEAAWEDYLSPQ
VEFRRGDFFDLKDFNLANPATIAGLARVYQYWIALSDCDGFRVDAVKHVSPVESRKFCAAINEYAQSIGKDNFLLTGELT
DDRMLLAYLDIVGRNLDAALDIVSAPIQLTAAAKGLAHPGAFFGLYDENTLAGAYRQSGLYHVSVLDDHDMSSRSYKSRF
AAHGEGVPNLYRQVAHAVGVQLTMPGIPSIYYGTEQALDGSESNHDYGIDGSHEYVDRYVREAMFGGAFGAFRTEGCHFF
NPDHPTYLRIAAIARLRNRLDAVGKTLRRGHHYLRETSFVHRPFVLPGAGELVAWSQILFETEALMVLNTHGLENRGAEV
TVETSLHPEGSSMAVLYHSEWSDDQLRQPPSAQTVPVEYGHGRATVRIDLPPCGMVILS

Specific function: Since Only Maltooligosaccharides Up To A Chain Length Of 6 Glucose Units Are Actively Transported Through The Cytoplasmic Membrane VIa The Membrane-Bound Complex Of Three Proteins, Malf, Malg, And Malk, Longer Maltooligosaccharides Must First Be Degraded

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=213, Percent_Identity=26.7605633802817, Blast_Score=82, Evalue=2e-15,
Organism=Escherichia coli, GI1789995, Length=346, Percent_Identity=26.5895953757225, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI1786604, Length=438, Percent_Identity=25.5707762557078, Blast_Score=90, Evalue=5e-19,
Organism=Escherichia coli, GI1790687, Length=383, Percent_Identity=26.3707571801567, Blast_Score=85, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6322245, Length=142, Percent_Identity=29.5774647887324, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321731, Length=146, Percent_Identity=28.7671232876712, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6319776, Length=146, Percent_Identity=28.7671232876712, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24586591, Length=218, Percent_Identity=32.5688073394495, Blast_Score=87, Evalue=4e-17,
Organism=Drosophila melanogaster, GI221330053, Length=212, Percent_Identity=32.5471698113208, Blast_Score=86, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24586597, Length=216, Percent_Identity=32.4074074074074, Blast_Score=85, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24586587, Length=217, Percent_Identity=30.8755760368664, Blast_Score=85, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24583747, Length=218, Percent_Identity=30.7339449541284, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24583749, Length=218, Percent_Identity=30.7339449541284, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24586599, Length=210, Percent_Identity=30.952380952381, Blast_Score=83, Evalue=5e-16,
Organism=Drosophila melanogaster, GI45549022, Length=222, Percent_Identity=29.7297297297297, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24583745, Length=213, Percent_Identity=28.6384976525822, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24586593, Length=213, Percent_Identity=30.5164319248826, Blast_Score=76, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24586589, Length=213, Percent_Identity=28.169014084507, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR005323 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF03714 PUD [H]

EC number: =3.2.1.1 [H]

Molecular weight: Translated: 69736; Mature: 69605

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITIEEKAPRKLSEADLRPRGQVHPSPASWRDQFLYQLLPDRFSDGREADRPLFDPADP
CEEEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ARFQVKDRGAWMAAGKRFVGGTLKGVISKLDYLQGLGVTTLWLNPPWKQRADLETYHGYG
CEEEEECCCCCHHCCCHHHCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCCC
IQNFFDIDPRFGTRQDLRDLVDAAHARGLYVILDVIYNHSGNNWFYRDEWDGSPQSMRPY
CCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCEEEECCCCCCCCCCCCC
RYAPGYPVHGWRSGDGRSVGEIVSLDDGVWPEEFQNFDWYTRAGRIINWSEAAWEDYLSP
CCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHCCCCHHHHCCCEEECHHHHHHHHCCC
QVEFRRGDFFDLKDFNLANPATIAGLARVYQYWIALSDCDGFRVDAVKHVSPVESRKFCA
CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEECHHHHCCCHHHHHHHH
AINEYAQSIGKDNFLLTGELTDDRMLLAYLDIVGRNLDAALDIVSAPIQLTAAAKGLAHP
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCEEEEHHHHCCCCC
GAFFGLYDENTLAGAYRQSGLYHVSVLDDHDMSSRSYKSRFAAHGEGVPNLYRQVAHAVG
CCEEEECCCCCHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHC
VQLTMPGIPSIYYGTEQALDGSESNHDYGIDGSHEYVDRYVREAMFGGAFGAFRTEGCHF
CEEECCCCCCEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCEE
FNPDHPTYLRIAAIARLRNRLDAVGKTLRRGHHYLRETSFVHRPFVLPGAGELVAWSQIL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHH
FETEALMVLNTHGLENRGAEVTVETSLHPEGSSMAVLYHSEWSDDQLRQPPSAQTVPVEY
HHCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHCCCCCCCEEEEEE
GHGRATVRIDLPPCGMVILS
CCCEEEEEEECCCCCEEEEC
>Mature Secondary Structure 
AITIEEKAPRKLSEADLRPRGQVHPSPASWRDQFLYQLLPDRFSDGREADRPLFDPADP
EEEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
ARFQVKDRGAWMAAGKRFVGGTLKGVISKLDYLQGLGVTTLWLNPPWKQRADLETYHGYG
CEEEEECCCCCHHCCCHHHCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCCC
IQNFFDIDPRFGTRQDLRDLVDAAHARGLYVILDVIYNHSGNNWFYRDEWDGSPQSMRPY
CCCEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHCCCCCCEEEECCCCCCCCCCCCC
RYAPGYPVHGWRSGDGRSVGEIVSLDDGVWPEEFQNFDWYTRAGRIINWSEAAWEDYLSP
CCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHCCCCHHHHCCCEEECHHHHHHHHCCC
QVEFRRGDFFDLKDFNLANPATIAGLARVYQYWIALSDCDGFRVDAVKHVSPVESRKFCA
CEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEECHHHHCCCHHHHHHHH
AINEYAQSIGKDNFLLTGELTDDRMLLAYLDIVGRNLDAALDIVSAPIQLTAAAKGLAHP
HHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCEEEEHHHHCCCCC
GAFFGLYDENTLAGAYRQSGLYHVSVLDDHDMSSRSYKSRFAAHGEGVPNLYRQVAHAVG
CCEEEECCCCCHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHC
VQLTMPGIPSIYYGTEQALDGSESNHDYGIDGSHEYVDRYVREAMFGGAFGAFRTEGCHF
CEEECCCCCCEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHCCCCEE
FNPDHPTYLRIAAIARLRNRLDAVGKTLRRGHHYLRETSFVHRPFVLPGAGELVAWSQIL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHH
FETEALMVLNTHGLENRGAEVTVETSLHPEGSSMAVLYHSEWSDDQLRQPPSAQTVPVEY
HHCCEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHCCCCCCCEEEEEE
GHGRATVRIDLPPCGMVILS
CCCEEEEEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8424949; 8485150 [H]