| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is gpmA1
Identifier: 37521165
GI number: 37521165
Start: 1713102
End: 1713800
Strand: Reverse
Name: gpmA1
Synonym: gll1596
Alternate gene names: 37521165
Gene position: 1713800-1713102 (Counterclockwise)
Preceding gene: 37521166
Following gene: 37521164
Centisome position: 36.78
GC content: 61.23
Gene sequence:
>699_bases ATGGCTCACCTCATCCTTATCCGGCACGGCCAGAGTCTTTGGAACGCCGCCAACAAATTTACCGGTTGGGTGGACGTTCC CTTGAGTGAGCGCGGCCGGGCGGAGGCGACGATCGCTTCTTGCAAACTTCGGGATTATCGGGTGAACGTCTGCTTCACCA GCATGCTGATGCGCGCCATCGAAACAGCGGTGATTACCCTGACCGAGTGCGACGATATCTGCGGCGGCAAAATCCCAATC ATCAAACACGAAGCCGACGACGAGAACTGGCACGGCTGGGACAACTACGACGGCGACCCGGCGGCGGAGTTGCCCATCTA TCCCACCGCGACCCTGGACGAGCGCTACTACGGCGATCTGCAAGGCCTCGACAAAGCCGAGACGACCGCGAAGTACGGCA AGGAGCAAGTCCAGATCTGGCGGCGCTCCTACTCGGTGCGCCCCCCCGGCGGCGAGAGCCTGGAGGACACGCGCAAGCGC GTCTACCCCTATTTCACCAACCGTATCCTGGGCCATATCAAGCAGGGGGACAACGTGCTGGTGGCTGCCCACGGCAACTC CCTGCGCTCGATCATCATGATTCTTGAAACCCTCAGCGAGGAAGAAGTGCCCAAGGTGGAGCTGGCCACCGGGGTGCCGA TCGTCTACGAACTCGACAAAGCGGCCCACATGCTCAGCAAGGCCGTGCTCACCAACTGA
Upstream 100 bases:
>100_bases AGGAATTGGGGGCCGGGATCGGGGCCGTCTCGAAACTGGCGTAGGTGATGTCTCCAAAGCAGTCCGACTGTGATAGCCAC CACGGAGCGAGGGTCTTTCC
Downstream 100 bases:
>100_bases CCCCCCACCACCCACCATGGCAATCACCATCGAAGAGAAAGCTCCCCGCAAGCTCAGCGAAGCGGATCTGCGGCCGCGCG GCCAAGTGCATCCGAGCCCG
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-dependent PGAM 1; PGAM 1; Phosphoglyceromutase 1; dPGM 1
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MAHLILIRHGQSLWNAANKFTGWVDVPLSERGRAEATIASCKLRDYRVNVCFTSMLMRAIETAVITLTECDDICGGKIPI IKHEADDENWHGWDNYDGDPAAELPIYPTATLDERYYGDLQGLDKAETTAKYGKEQVQIWRRSYSVRPPGGESLEDTRKR VYPYFTNRILGHIKQGDNVLVAAHGNSLRSIIMILETLSEEEVPKVELATGVPIVYELDKAAHMLSKAVLTN
Sequences:
>Translated_232_residues MAHLILIRHGQSLWNAANKFTGWVDVPLSERGRAEATIASCKLRDYRVNVCFTSMLMRAIETAVITLTECDDICGGKIPI IKHEADDENWHGWDNYDGDPAAELPIYPTATLDERYYGDLQGLDKAETTAKYGKEQVQIWRRSYSVRPPGGESLEDTRKR VYPYFTNRILGHIKQGDNVLVAAHGNSLRSIIMILETLSEEEVPKVELATGVPIVYELDKAAHMLSKAVLTN >Mature_231_residues AHLILIRHGQSLWNAANKFTGWVDVPLSERGRAEATIASCKLRDYRVNVCFTSMLMRAIETAVITLTECDDICGGKIPII KHEADDENWHGWDNYDGDPAAELPIYPTATLDERYYGDLQGLDKAETTAKYGKEQVQIWRRSYSVRPPGGESLEDTRKRV YPYFTNRILGHIKQGDNVLVAAHGNSLRSIIMILETLSEEEVPKVELATGVPIVYELDKAAHMLSKAVLTN
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG0588
COG function: function code G; Phosphoglycerate mutase 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily
Homologues:
Organism=Homo sapiens, GI4505753, Length=246, Percent_Identity=41.4634146341463, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI50593010, Length=246, Percent_Identity=37.8048780487805, Blast_Score=164, Evalue=5e-41, Organism=Homo sapiens, GI71274132, Length=246, Percent_Identity=39.0243902439024, Blast_Score=153, Evalue=1e-37, Organism=Homo sapiens, GI4502445, Length=248, Percent_Identity=31.8548387096774, Blast_Score=134, Evalue=6e-32, Organism=Homo sapiens, GI40353764, Length=248, Percent_Identity=31.8548387096774, Blast_Score=134, Evalue=6e-32, Organism=Homo sapiens, GI310129614, Length=145, Percent_Identity=42.7586206896552, Blast_Score=105, Evalue=3e-23, Organism=Escherichia coli, GI1786970, Length=259, Percent_Identity=38.2239382239382, Blast_Score=167, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6322697, Length=247, Percent_Identity=36.8421052631579, Blast_Score=152, Evalue=4e-38, Organism=Saccharomyces cerevisiae, GI6320183, Length=275, Percent_Identity=29.0909090909091, Blast_Score=105, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6324516, Length=273, Percent_Identity=25.6410256410256, Blast_Score=100, Evalue=2e-22, Organism=Drosophila melanogaster, GI85725270, Length=247, Percent_Identity=37.246963562753, Blast_Score=150, Evalue=5e-37, Organism=Drosophila melanogaster, GI85725272, Length=247, Percent_Identity=37.246963562753, Blast_Score=150, Evalue=5e-37, Organism=Drosophila melanogaster, GI24650981, Length=247, Percent_Identity=37.246963562753, Blast_Score=150, Evalue=5e-37, Organism=Drosophila melanogaster, GI24646216, Length=253, Percent_Identity=34.7826086956522, Blast_Score=149, Evalue=1e-36, Organism=Drosophila melanogaster, GI28571817, Length=257, Percent_Identity=29.5719844357977, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24648979, Length=257, Percent_Identity=29.5719844357977, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI28571815, Length=246, Percent_Identity=30.0813008130081, Blast_Score=103, Evalue=1e-22,
Paralogues:
None
Copy number: 960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): GPMA1_GLOVI (Q7NK82)
Other databases:
- EMBL: BA000045 - RefSeq: NP_924542.1 - ProteinModelPortal: Q7NK82 - SMR: Q7NK82 - GeneID: 2598562 - GenomeReviews: BA000045_GR - KEGG: gvi:gll1596 - NMPDR: fig|251221.1.peg.1596 - HOGENOM: HBG658938 - OMA: IRTLWFV - ProtClustDB: PRK01112 - BioCyc: GVIO251221:GLL1596-MONOMER - BRENDA: 5.4.2.1 - GO: GO:0006096 - HAMAP: MF_01039 - InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR005952 - PANTHER: PTHR11931 - SMART: SM00855 - TIGRFAMs: TIGR01258
Pfam domain/function: PF00300 PGAM
EC number: =5.4.2.1
Molecular weight: Translated: 26061; Mature: 25930
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: PS00175 PG_MUTASE
Important sites: ACT_SITE 9-9 ACT_SITE 184-184
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHLILIRHGQSLWNAANKFTGWVDVPLSERGRAEATIASCKLRDYRVNVCFTSMLMRAI CCEEEEEECCCHHHHHHHHCCCEEECCCCCCCCCHHHHEEEEEEEEEEHHHHHHHHHHHH ETAVITLTECDDICGGKIPIIKHEADDENWHGWDNYDGDPAAELPIYPTATLDERYYGDL HHHEEEEECCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC QGLDKAETTAKYGKEQVQIWRRSYSVRPPGGESLEDTRKRVYPYFTNRILGHIKQGDNVL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE VAAHGNSLRSIIMILETLSEEEVPKVELATGVPIVYELDKAAHMLSKAVLTN EEECCCHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEHHHHHHHHHHHHHCC >Mature Secondary Structure AHLILIRHGQSLWNAANKFTGWVDVPLSERGRAEATIASCKLRDYRVNVCFTSMLMRAI CEEEEEECCCHHHHHHHHCCCEEECCCCCCCCCHHHHEEEEEEEEEEHHHHHHHHHHHH ETAVITLTECDDICGGKIPIIKHEADDENWHGWDNYDGDPAAELPIYPTATLDERYYGDL HHHEEEEECCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCC QGLDKAETTAKYGKEQVQIWRRSYSVRPPGGESLEDTRKRVYPYFTNRILGHIKQGDNVL CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE VAAHGNSLRSIIMILETLSEEEVPKVELATGVPIVYELDKAAHMLSKAVLTN EEECCCHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14621292