Click here to switch to the map view.

The map label for this gene is ybaZ [H]

Identifier: 37521030

GI number: 37521030

Start: 1566662

End: 1567048

Strand: Direct

Name: ybaZ [H]

Synonym: glr1461

Alternate gene names: 37521030

Gene position: 1566662-1567048 (Clockwise)

Preceding gene: 37521029

Following gene: 37521034

Centisome position: 33.63

GC content: 62.02

Gene sequence:

>387_bases
ATGGCCAATTCGCCCGTCTACGAACGCATCTACGCTGTAGTCCGCCGTATCCCCGCGGGCAAAGTGGCCACCTACGGCCA
GGTGGCACTTTGGGCAGGCTTGCCCGGTCGGGCCAGGCAGGTGGGTTATGCCCTGTTTCGGGTCGCCCCGGACGCAGACG
TCCCCTGGCAGCGCGTGATCAACGCAAAAGGCGAAATTTCCGCATCTCCCCACCGCCTCGGTAACGACGATTACCAACAG
GTTCTGCTGAAGGCGGAGGGGGTCACTTTTGATTGCTCTGGGCGGATCGATCTGGGGGAGTTTGGCTGGCAGCCAGGTGC
TTGCGCTCAGCCACCCGCAGAATTTGAGCCGCCAGCATCGCCGCCCCAAAACCGTTGTCAATGTTGA

Upstream 100 bases:

>100_bases
CGAATACACTTGCGACCCCCACGAGGTCCAGCAGGTCTTCCAGATCGAACTGGAGTCTTTGCACCACTTTTTGCGCCGCA
ACCTCCTGTACTCCACCTAA

Downstream 100 bases:

>100_bases
CCACCCCGATACCGGGAGCACAACTATTGAGCATCGCCAATAAAGCTGCCAGCCCGCCAAAGTGGGCACCGTAACCGACG
CTGGTTGGAACGGCAATCAC

Product: methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MANSPVYERIYAVVRRIPAGKVATYGQVALWAGLPGRARQVGYALFRVAPDADVPWQRVINAKGEISASPHRLGNDDYQQ
VLLKAEGVTFDCSGRIDLGEFGWQPGACAQPPAEFEPPASPPQNRCQC

Sequences:

>Translated_128_residues
MANSPVYERIYAVVRRIPAGKVATYGQVALWAGLPGRARQVGYALFRVAPDADVPWQRVINAKGEISASPHRLGNDDYQQ
VLLKAEGVTFDCSGRIDLGEFGWQPGACAQPPAEFEPPASPPQNRCQC
>Mature_127_residues
ANSPVYERIYAVVRRIPAGKVATYGQVALWAGLPGRARQVGYALFRVAPDADVPWQRVINAKGEISASPHRLGNDDYQQV
LLKAEGVTFDCSGRIDLGEFGWQPGACAQPPAEFEPPASPPQNRCQC

Specific function: Unknown

COG id: COG3695

COG function: function code L; Predicted methylated DNA-protein cysteine methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MGMT family [H]

Homologues:

Organism=Escherichia coli, GI1786659, Length=96, Percent_Identity=43.75, Blast_Score=70, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014048
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01035 DNA_binding_1 [H]

EC number: NA

Molecular weight: Translated: 13925; Mature: 13794

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANSPVYERIYAVVRRIPAGKVATYGQVALWAGLPGRARQVGYALFRVAPDADVPWQRVI
CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHEEECCCCCCCHHHHH
NAKGEISASPHRLGNDDYQQVLLKAEGVTFDCSGRIDLGEFGWQPGACAQPPAEFEPPAS
CCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCEEHHHCCCCCCCCCCCCCCCCCCCC
PPQNRCQC
CCCCCCCC
>Mature Secondary Structure 
ANSPVYERIYAVVRRIPAGKVATYGQVALWAGLPGRARQVGYALFRVAPDADVPWQRVI
CCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHEEECCCCCCCHHHHH
NAKGEISASPHRLGNDDYQQVLLKAEGVTFDCSGRIDLGEFGWQPGACAQPPAEFEPPAS
CCCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCCEEHHHCCCCCCCCCCCCCCCCCCCC
PPQNRCQC
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]