Definition Gloeobacter violaceus PCC 7421 chromosome, complete genome.
Accession NC_005125
Length 4,659,019

Click here to switch to the map view.

The map label for this gene is 37520978

Identifier: 37520978

GI number: 37520978

Start: 1511848

End: 1512447

Strand: Reverse

Name: 37520978

Synonym: gll1409

Alternate gene names: NA

Gene position: 1512447-1511848 (Counterclockwise)

Preceding gene: 37520979

Following gene: 37520977

Centisome position: 32.46

GC content: 68.0

Gene sequence:

>600_bases
ATGAGGGAGCGAGCGATGTCCAACTTCTTTAAAGACTTCATGAACGTGGAGAGTTTCATCTACAGCACGTGGATGAACCT
GTTCGGCGGGGCGTTTTCCCGGCTGACCCGTCCCCAGTCCGGTGCCAGTTCGGTGGTGCCCGGCGTAGCGGCCCCCCTGC
GCCCCGGTATGCGCCCGCCGCAGCGGCCCGGTGCCCCCGCTCCCCAGCGCCCCGGCGCCCCGCCCGCCCAGGGAGCCGCG
CCGCAGCGGCCCGGTGCCCCTGCTCCCCAACGCCCCGCGGCGGGTGCCCCCGGCCCGCGCCCGCCCGCTGCTCCCCAGCG
CCCGGGGATGCCCCCCGGCATGCCCGCCCCCAACCCGAACCGGCAGTTGGACAAATCCGCCCAGGGAGCACAGTTGTTCG
GCATGAACATCAACAATCTGCCCCAGATCCCCGGTCTCAACGCACCGCCCAGCGGCAAGGGCAACGCTGTGCAAACCCGC
GCCGAGCAAGAAATTTATTTGCTCAAGGCGCGCGGCATGAACTTTGTTTCCCAGGGCGTCCACCGCTCCTTCAGCCAGAT
GTACACCAACTTGCGAAGCTTCTTCGAAAGAAGGGCGTGA

Upstream 100 bases:

>100_bases
CCCTAGGAGCCCCTACCCCGGACCGACCGCCCCACAGCAAGGGGGCAGGGCGATCCATCGTCCCGGCGGCCGGAGTAGTA
ATAGCAGTCAGCCCGCAAGC

Downstream 100 bases:

>100_bases
ACACCCGCGCGGCCACCCCCGGCCCGCCTAGCCAACCCGCACCCGTATGGAAAAACGCGTCATCAGCGCTGTGCTCTCGG
AGCAGGCGGTCACCTACCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRERAMSNFFKDFMNVESFIYSTWMNLFGGAFSRLTRPQSGASSVVPGVAAPLRPGMRPPQRPGAPAPQRPGAPPAQGAA
PQRPGAPAPQRPAAGAPGPRPPAAPQRPGMPPGMPAPNPNRQLDKSAQGAQLFGMNINNLPQIPGLNAPPSGKGNAVQTR
AEQEIYLLKARGMNFVSQGVHRSFSQMYTNLRSFFERRA

Sequences:

>Translated_199_residues
MRERAMSNFFKDFMNVESFIYSTWMNLFGGAFSRLTRPQSGASSVVPGVAAPLRPGMRPPQRPGAPAPQRPGAPPAQGAA
PQRPGAPAPQRPAAGAPGPRPPAAPQRPGMPPGMPAPNPNRQLDKSAQGAQLFGMNINNLPQIPGLNAPPSGKGNAVQTR
AEQEIYLLKARGMNFVSQGVHRSFSQMYTNLRSFFERRA
>Mature_199_residues
MRERAMSNFFKDFMNVESFIYSTWMNLFGGAFSRLTRPQSGASSVVPGVAAPLRPGMRPPQRPGAPAPQRPGAPPAQGAA
PQRPGAPAPQRPAAGAPGPRPPAAPQRPGMPPGMPAPNPNRQLDKSAQGAQLFGMNINNLPQIPGLNAPPSGKGNAVQTR
AEQEIYLLKARGMNFVSQGVHRSFSQMYTNLRSFFERRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21321; Mature: 21321

Theoretical pI: Translated: 12.37; Mature: 12.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRERAMSNFFKDFMNVESFIYSTWMNLFGGAFSRLTRPQSGASSVVPGVAAPLRPGMRPP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHCCCCCCCC
QRPGAPAPQRPGAPPAQGAAPQRPGAPAPQRPAAGAPGPRPPAAPQRPGMPPGMPAPNPN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RQLDKSAQGAQLFGMNINNLPQIPGLNAPPSGKGNAVQTRAEQEIYLLKARGMNFVSQGV
CHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEHHHHHCCHHHHHHH
HRSFSQMYTNLRSFFERRA
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRERAMSNFFKDFMNVESFIYSTWMNLFGGAFSRLTRPQSGASSVVPGVAAPLRPGMRPP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHCCCCCCCC
QRPGAPAPQRPGAPPAQGAAPQRPGAPAPQRPAAGAPGPRPPAAPQRPGMPPGMPAPNPN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RQLDKSAQGAQLFGMNINNLPQIPGLNAPPSGKGNAVQTRAEQEIYLLKARGMNFVSQGV
CHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEHHHHHCCHHHHHHH
HRSFSQMYTNLRSFFERRA
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA