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The map label for this gene is 37520977

Identifier: 37520977

GI number: 37520977

Start: 1509561

End: 1511801

Strand: Reverse

Name: 37520977

Synonym: gll1408

Alternate gene names: NA

Gene position: 1511801-1509561 (Counterclockwise)

Preceding gene: 37520978

Following gene: 37520976

Centisome position: 32.45

GC content: 65.46

Gene sequence:

>2241_bases
ATGGAAAAACGCGTCATCAGCGCTGTGCTCTCGGAGCAGGCGGTCACCTACCGCCCCGGTGGTCCGCCGGTCACTTTTGA
GGTGACCGTCAGCAACGACAGCAACCAGTTCGCGGGATTCAAACTGGAGTTACTGGCGGCGGGGACGGGGCGCAATCCCA
ACTGGTACCAGCTCTTTCCGGAAGTCTCCACCGCCAAGCCCCCCGGCAGCCGCACCCAGTTTCAGGTGACGATCGTCGAT
TCGCCCATTCCCGGTTTTGTAGGGGCGATCAACGTCACGATCTTGATCACCTCCCCGCAGCTCAAGGAGGAGCGCAAGTA
CCTGCTGCGGCTGATTGTCGAAGCGGGTTCGGGACCGTCGCAACTATTGGTCGACCTGCCGGTGCGCCAGTTTCAGACCT
ATCCGCGCAATCCCGTGGATATTCCGGTGCGGGTGCGCAACCTCAGCCAGCGGCCGGTGGATATCGTTTTGCGCTTTTTG
GGAATCGACCCGGTCTGGATGGCCACCGGCACCGAGCGGCGCTTCGTCGTCGAAGCGGGCGCCCTGGTGGATGTCGCCTT
TCAGTGCCTGCCGCCGGGGCCGAACCAGGCCCTCGGCCAGGAGTATCCCTTTGCGGTCGAAGCGCTCCCCCAGAGCGGGA
GCGCCGCGCGCGCGGAAGGGTCGCTGGAGGTGTTGCCGGTAGGCTTCGTGCAGTTCAATTGCAGCGAACCGCGGCAACGT
CTGCCGGAAAAAGGCGGCGCCTGGTGGCCCGACTGGAGCGAGCTTGCCGCCACCTTTCCGTTGCTGTTTAAAAACGCGAG
CAACCTGCGCCAGGAGGTGAGCGTCGCCGTCGAAGGCCGCGACAGCGGCAGGTGCACCGCCCGCACCGAACCGCCCCAGG
GGGTGCTGGGGGTCTCCACCACCACCGAACTCAAACTCGAAATCACCCGCAAGCGCTCGCTGTTCGGCCTACCCAAGACA
CTGCAATTGGAGGCGGTGGCGGTCCTGTCCGACGAGCGGCTGGGAGGTGCCGATCCGCCCTCGCAAAAACTCGAACTGCG
CGTGTTGCCGAAGTTGCCCGTCTGGATGCAGGTATTGTCCTTTGCACTCACGTTTATCTCGGGCAGTTGGGGGGCGGTCA
CGGTCCACGAGCATTTCAATCCCCGCGCCCACACCGACCTGGTCAATTCGGTGCGCGTCAGCGGCGACGCGCGCATGGTC
TACAGCGCCAGCGACGACCGCACCATCCGCAGCTGGCGCATCGGCAAAGAAGGCGGCGATCTCAGCTACGAGGGCATTCT
GGTCGATACCGGCCGGCCCGTGCGCGCGCTGCGCTTTATGCCCAAGAACAACAGCCAGCTGGCCGCCGGGCTCGAAAACG
GAGCGGTGCAAATCTGGAACGTCGCCACCGGCGAGAAGCTGCGCCAGCTCGACTACCAGCCGGAGGTGGACGACCGGGTC
TTCGACCTTGTCTTCACCGCCAACTCGCGCCATCTATTTAGCGCCCACGGCAGCGGCATGGTGCAGATGTGGGACCTGCA
ATCGGAGGCCACCCAGCCGGTGCGCGTCCTCGAACTGGATAAAAAACTCGATTACACCGTGCAGGCGCTCGAACTGAGCG
GCGACGAGCGCACGCTGATTAGCGCCGGCCGGTTTTTCAGGCTGTTGCTCTGGGATCTGGATAAACCCGACGCCAGACCG
CGCCGATTGCAGCCGCGCGGCGGCCAGAACGACGTCATCTGGAGCGTCGCCCTCTCGCCCAAAAACCCGAATTTGCTCGC
CACCGCCGATTCCCAAGGCAACATCACCACCTACGACCTCGCCCGCTGCGCCGACCCGAACGCCGCAAAGGCGCCGTTTA
GCGGGGCGACCGCCCTCGGCTCCCTGGTCAAAGCGGACCCGAAGGCGCAGGACCGGGCCGTCCCCGTCCAGAGCGCCGAA
ACGGTGCCTGCGAACGTGCCCGTCGATGTCACCTGCCCGGTGCTGGATCGCTGGTTGGGCCACGGCAGTTTCGCGGTCCG
CTCGCTCGCCTTCGGCGGCGACGGCCTGTCGCTGATTAGCGGCGGGGACGATCACCGGGTGATGCTCTGGCAGCTCACCC
CCAAAGGCACGCGCGCGGCGCGCTCCGTCACCGGCCGCTTGCTGGAGGAGCGCCCCAAAAAGGTGAACGCCGTTGACCTC
GGCCGCGACCGCGAGGGGATCATCGGTGTAAGCGGCGGCGACGATTTTCAAGTGTCGATGCGACGGGTGCCCCTGCCGTG
A

Upstream 100 bases:

>100_bases
TCCTTCAGCCAGATGTACACCAACTTGCGAAGCTTCTTCGAAAGAAGGGCGTGAACACCCGCGCGGCCACCCCCGGCCCG
CCTAGCCAACCCGCACCCGT

Downstream 100 bases:

>100_bases
TCCAGACTCGCTCCTGCCCGATTGTGCTGATCATGAACCCGCCCGGCCCCCAGCAGGCGACGCCGGGTTCGCAGGTCGAG
CTGTTTGTCACCGTGAGCAA

Product: WD-containing repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 746; Mature: 746

Protein sequence:

>746_residues
MEKRVISAVLSEQAVTYRPGGPPVTFEVTVSNDSNQFAGFKLELLAAGTGRNPNWYQLFPEVSTAKPPGSRTQFQVTIVD
SPIPGFVGAINVTILITSPQLKEERKYLLRLIVEAGSGPSQLLVDLPVRQFQTYPRNPVDIPVRVRNLSQRPVDIVLRFL
GIDPVWMATGTERRFVVEAGALVDVAFQCLPPGPNQALGQEYPFAVEALPQSGSAARAEGSLEVLPVGFVQFNCSEPRQR
LPEKGGAWWPDWSELAATFPLLFKNASNLRQEVSVAVEGRDSGRCTARTEPPQGVLGVSTTTELKLEITRKRSLFGLPKT
LQLEAVAVLSDERLGGADPPSQKLELRVLPKLPVWMQVLSFALTFISGSWGAVTVHEHFNPRAHTDLVNSVRVSGDARMV
YSASDDRTIRSWRIGKEGGDLSYEGILVDTGRPVRALRFMPKNNSQLAAGLENGAVQIWNVATGEKLRQLDYQPEVDDRV
FDLVFTANSRHLFSAHGSGMVQMWDLQSEATQPVRVLELDKKLDYTVQALELSGDERTLISAGRFFRLLLWDLDKPDARP
RRLQPRGGQNDVIWSVALSPKNPNLLATADSQGNITTYDLARCADPNAAKAPFSGATALGSLVKADPKAQDRAVPVQSAE
TVPANVPVDVTCPVLDRWLGHGSFAVRSLAFGGDGLSLISGGDDHRVMLWQLTPKGTRAARSVTGRLLEERPKKVNAVDL
GRDREGIIGVSGGDDFQVSMRRVPLP

Sequences:

>Translated_746_residues
MEKRVISAVLSEQAVTYRPGGPPVTFEVTVSNDSNQFAGFKLELLAAGTGRNPNWYQLFPEVSTAKPPGSRTQFQVTIVD
SPIPGFVGAINVTILITSPQLKEERKYLLRLIVEAGSGPSQLLVDLPVRQFQTYPRNPVDIPVRVRNLSQRPVDIVLRFL
GIDPVWMATGTERRFVVEAGALVDVAFQCLPPGPNQALGQEYPFAVEALPQSGSAARAEGSLEVLPVGFVQFNCSEPRQR
LPEKGGAWWPDWSELAATFPLLFKNASNLRQEVSVAVEGRDSGRCTARTEPPQGVLGVSTTTELKLEITRKRSLFGLPKT
LQLEAVAVLSDERLGGADPPSQKLELRVLPKLPVWMQVLSFALTFISGSWGAVTVHEHFNPRAHTDLVNSVRVSGDARMV
YSASDDRTIRSWRIGKEGGDLSYEGILVDTGRPVRALRFMPKNNSQLAAGLENGAVQIWNVATGEKLRQLDYQPEVDDRV
FDLVFTANSRHLFSAHGSGMVQMWDLQSEATQPVRVLELDKKLDYTVQALELSGDERTLISAGRFFRLLLWDLDKPDARP
RRLQPRGGQNDVIWSVALSPKNPNLLATADSQGNITTYDLARCADPNAAKAPFSGATALGSLVKADPKAQDRAVPVQSAE
TVPANVPVDVTCPVLDRWLGHGSFAVRSLAFGGDGLSLISGGDDHRVMLWQLTPKGTRAARSVTGRLLEERPKKVNAVDL
GRDREGIIGVSGGDDFQVSMRRVPLP
>Mature_746_residues
MEKRVISAVLSEQAVTYRPGGPPVTFEVTVSNDSNQFAGFKLELLAAGTGRNPNWYQLFPEVSTAKPPGSRTQFQVTIVD
SPIPGFVGAINVTILITSPQLKEERKYLLRLIVEAGSGPSQLLVDLPVRQFQTYPRNPVDIPVRVRNLSQRPVDIVLRFL
GIDPVWMATGTERRFVVEAGALVDVAFQCLPPGPNQALGQEYPFAVEALPQSGSAARAEGSLEVLPVGFVQFNCSEPRQR
LPEKGGAWWPDWSELAATFPLLFKNASNLRQEVSVAVEGRDSGRCTARTEPPQGVLGVSTTTELKLEITRKRSLFGLPKT
LQLEAVAVLSDERLGGADPPSQKLELRVLPKLPVWMQVLSFALTFISGSWGAVTVHEHFNPRAHTDLVNSVRVSGDARMV
YSASDDRTIRSWRIGKEGGDLSYEGILVDTGRPVRALRFMPKNNSQLAAGLENGAVQIWNVATGEKLRQLDYQPEVDDRV
FDLVFTANSRHLFSAHGSGMVQMWDLQSEATQPVRVLELDKKLDYTVQALELSGDERTLISAGRFFRLLLWDLDKPDARP
RRLQPRGGQNDVIWSVALSPKNPNLLATADSQGNITTYDLARCADPNAAKAPFSGATALGSLVKADPKAQDRAVPVQSAE
TVPANVPVDVTCPVLDRWLGHGSFAVRSLAFGGDGLSLISGGDDHRVMLWQLTPKGTRAARSVTGRLLEERPKKVNAVDL
GRDREGIIGVSGGDDFQVSMRRVPLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 16 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646
- InterPro:   IPR020472
- InterPro:   IPR007111
- InterPro:   IPR011047
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00805 Pentapeptide; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 81558; Mature: 81558

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: PS00678 WD_REPEATS_1 ; PS50082 WD_REPEATS_2 ; PS50294 WD_REPEATS_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRVISAVLSEQAVTYRPGGPPVTFEVTVSNDSNQFAGFKLELLAAGTGRNPNWYQLFP
CCHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEECC
EVSTAKPPGSRTQFQVTIVDSPIPGFVGAINVTILITSPQLKEERKYLLRLIVEAGSGPS
CCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHH
QLLVDLPVRQFQTYPRNPVDIPVRVRNLSQRPVDIVLRFLGIDPVWMATGTERRFVVEAG
EEEEECCHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCEEEEECC
ALVDVAFQCLPPGPNQALGQEYPFAVEALPQSGSAARAEGSLEVLPVGFVQFNCSEPRQR
CEEEEHHEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCCHHHH
LPEKGGAWWPDWSELAATFPLLFKNASNLRQEVSVAVEGRDSGRCTARTEPPQGVLGVST
CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHEEEEEEEECCCCCCEEECCCCCCCEEECCC
TTELKLEITRKRSLFGLPKTLQLEAVAVLSDERLGGADPPSQKLELRVLPKLPVWMQVLS
CEEEEEEEEECCHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHH
FALTFISGSWGAVTVHEHFNPRAHTDLVNSVRVSGDARMVYSASDDRTIRSWRIGKEGGD
HHHHHHCCCCCEEEEECCCCCCHHHHHHHHEEECCCEEEEEECCCCCEEEEEEECCCCCC
LSYEGILVDTGRPVRALRFMPKNNSQLAAGLENGAVQIWNVATGEKLRQLDYQPEVDDRV
EEEEEEEEECCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCHHHHHCCCCCCCCCEE
FDLVFTANSRHLFSAHGSGMVQMWDLQSEATQPVRVLELDKKLDYTVQALELSGDERTLI
EEEEEECCCCEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCCCEEEE
SAGRFFRLLLWDLDKPDARPRRLQPRGGQNDVIWSVALSPKNPNLLATADSQGNITTYDL
HHHHEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEH
ARCADPNAAKAPFSGATALGSLVKADPKAQDRAVPVQSAETVPANVPVDVTCPVLDRWLG
HHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHC
HGSFAVRSLAFGGDGLSLISGGDDHRVMLWQLTPKGTRAARSVTGRLLEERPKKVNAVDL
CCCCEEEEEEECCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEC
GRDREGIIGVSGGDDFQVSMRRVPLP
CCCCCCEEECCCCCCEEEEEEECCCC
>Mature Secondary Structure
MEKRVISAVLSEQAVTYRPGGPPVTFEVTVSNDSNQFAGFKLELLAAGTGRNPNWYQLFP
CCHHHHHHHHHCCCEEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCEEEECC
EVSTAKPPGSRTQFQVTIVDSPIPGFVGAINVTILITSPQLKEERKYLLRLIVEAGSGPS
CCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHH
QLLVDLPVRQFQTYPRNPVDIPVRVRNLSQRPVDIVLRFLGIDPVWMATGTERRFVVEAG
EEEEECCHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCEEEEECC
ALVDVAFQCLPPGPNQALGQEYPFAVEALPQSGSAARAEGSLEVLPVGFVQFNCSEPRQR
CEEEEHHEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEECCCCHHHH
LPEKGGAWWPDWSELAATFPLLFKNASNLRQEVSVAVEGRDSGRCTARTEPPQGVLGVST
CCCCCCCCCCCHHHHHHHHHHHHCCHHHHHEEEEEEEECCCCCCEEECCCCCCCEEECCC
TTELKLEITRKRSLFGLPKTLQLEAVAVLSDERLGGADPPSQKLELRVLPKLPVWMQVLS
CEEEEEEEEECCHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHH
FALTFISGSWGAVTVHEHFNPRAHTDLVNSVRVSGDARMVYSASDDRTIRSWRIGKEGGD
HHHHHHCCCCCEEEEECCCCCCHHHHHHHHEEECCCEEEEEECCCCCEEEEEEECCCCCC
LSYEGILVDTGRPVRALRFMPKNNSQLAAGLENGAVQIWNVATGEKLRQLDYQPEVDDRV
EEEEEEEEECCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCHHHHHCCCCCCCCCEE
FDLVFTANSRHLFSAHGSGMVQMWDLQSEATQPVRVLELDKKLDYTVQALELSGDERTLI
EEEEEECCCCEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEEECCCCEEEE
SAGRFFRLLLWDLDKPDARPRRLQPRGGQNDVIWSVALSPKNPNLLATADSQGNITTYDL
HHHHEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCEEEEEH
ARCADPNAAKAPFSGATALGSLVKADPKAQDRAVPVQSAETVPANVPVDVTCPVLDRWLG
HHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHC
HGSFAVRSLAFGGDGLSLISGGDDHRVMLWQLTPKGTRAARSVTGRLLEERPKKVNAVDL
CCCCEEEEEEECCCCEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEC
GRDREGIIGVSGGDDFQVSMRRVPLP
CCCCCCEEECCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]