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The map label for this gene is potC [H]

Identifier: 37520971

GI number: 37520971

Start: 1502683

End: 1503468

Strand: Reverse

Name: potC [H]

Synonym: gll1402

Alternate gene names: 37520971

Gene position: 1503468-1502683 (Counterclockwise)

Preceding gene: 37520972

Following gene: 37520965

Centisome position: 32.27

GC content: 64.12

Gene sequence:

>786_bases
ATGAGCGGCAGGCGGGCATTGTGGCTCAGGCTGTGGGCCGTGGCGGTCTTCGGTTATCTATACCTGCCCATCTTGGTGTT
GGTGGTATTTTCCTTCAACAGCCAGAAGCTCAACCTGCGCTGGCAGGGCTTCACCCTCGACTGGTACCGAGTGCTGCTGG
CCGATACGCGCATCCAGGAGGCGGCGATCAATTCGCTGGTGGTGGCGGGGGCGGCCACCACCACAGCGACCGTCCTGGGT
ACGCTGCTCGCCCTCGCCCTGGCGCGCTACCGGCTTGCCCAACCGGCGGAACTGCTGCTCTACATCGCAATCATCGTGCC
GGAGGTGGTGCTCGGCATTGCCCTGCTTATCTGGTTCTCGCAACTGGGGATCGCCGCGGGCCTGGTCACGGTGGCGACCG
GGCATGTGGTGCTGTGTACACCGTTTGTCGCCCTCACCGTGCGTGCCCGCCTCTCGGGCTACGACCGCACCCTCGAAGAG
GCGGCGATGGATCTGGGGGCACGCGAATGGACCACTTTCTGGCGGGTGACGATGCCCGCCATCTGGCCGGGCGTGCTCTC
GGGGGCACTGCTGGCTTTTACGCTCTCGCTCGACGATTATGTGCTGGCGTTGTTTACCGCCGGGCCGGGGGCGACGACGT
TGCCCTTGCGCATCTTCTCGATGGTGCGCTTCAGCATCACCCCGGAGATCAACGCCCTTTCGACCCTATGGGTTGTGGGG
GTGAGCCTGGTGCTGCTGGTCGCTCAACGGTTCAGCCGCTCCATTGGTGTGGCCACAAAAGATTAA

Upstream 100 bases:

>100_bases
GCGACTGGCCCTTTGGAGCGGCGGCGGCCATGGTGCTGGTGATCCTCACCCTCGGGCTGCTGGTCCTCTACACCCGCTTT
GCCGAGAAGGAAACACTCGT

Downstream 100 bases:

>100_bases
TTACAGATTACAGAATCACGTCAAACGAGTTTAATATAACTGAGATACATGCAACCCCCATACCAGAGCACCGCAACGAT
GTCAGAGGCCTGCGGTTACT

Product: ABC transporter permease protein

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSGRRALWLRLWAVAVFGYLYLPILVLVVFSFNSQKLNLRWQGFTLDWYRVLLADTRIQEAAINSLVVAGAATTTATVLG
TLLALALARYRLAQPAELLLYIAIIVPEVVLGIALLIWFSQLGIAAGLVTVATGHVVLCTPFVALTVRARLSGYDRTLEE
AAMDLGAREWTTFWRVTMPAIWPGVLSGALLAFTLSLDDYVLALFTAGPGATTLPLRIFSMVRFSITPEINALSTLWVVG
VSLVLLVAQRFSRSIGVATKD

Sequences:

>Translated_261_residues
MSGRRALWLRLWAVAVFGYLYLPILVLVVFSFNSQKLNLRWQGFTLDWYRVLLADTRIQEAAINSLVVAGAATTTATVLG
TLLALALARYRLAQPAELLLYIAIIVPEVVLGIALLIWFSQLGIAAGLVTVATGHVVLCTPFVALTVRARLSGYDRTLEE
AAMDLGAREWTTFWRVTMPAIWPGVLSGALLAFTLSLDDYVLALFTAGPGATTLPLRIFSMVRFSITPEINALSTLWVVG
VSLVLLVAQRFSRSIGVATKD
>Mature_260_residues
SGRRALWLRLWAVAVFGYLYLPILVLVVFSFNSQKLNLRWQGFTLDWYRVLLADTRIQEAAINSLVVAGAATTTATVLGT
LLALALARYRLAQPAELLLYIAIIVPEVVLGIALLIWFSQLGIAAGLVTVATGHVVLCTPFVALTVRARLSGYDRTLEEA
AMDLGAREWTTFWRVTMPAIWPGVLSGALLAFTLSLDDYVLALFTAGPGATTLPLRIFSMVRFSITPEINALSTLWVVGV
SLVLLVAQRFSRSIGVATKD

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787368, Length=224, Percent_Identity=41.9642857142857, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1787081, Length=241, Percent_Identity=43.9834024896266, Blast_Score=166, Evalue=1e-42,
Organism=Escherichia coli, GI1787714, Length=219, Percent_Identity=38.3561643835616, Blast_Score=101, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28483; Mature: 28352

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGRRALWLRLWAVAVFGYLYLPILVLVVFSFNSQKLNLRWQGFTLDWYRVLLADTRIQE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
AAINSLVVAGAATTTATVLGTLLALALARYRLAQPAELLLYIAIIVPEVVLGIALLIWFS
HHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGIAAGLVTVATGHVVLCTPFVALTVRARLSGYDRTLEEAAMDLGAREWTTFWRVTMPA
HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
IWPGVLSGALLAFTLSLDDYVLALFTAGPGATTLPLRIFSMVRFSITPEINALSTLWVVG
HHHHHHHHHHHHHHCCHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VSLVLLVAQRFSRSIGVATKD
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SGRRALWLRLWAVAVFGYLYLPILVLVVFSFNSQKLNLRWQGFTLDWYRVLLADTRIQE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHH
AAINSLVVAGAATTTATVLGTLLALALARYRLAQPAELLLYIAIIVPEVVLGIALLIWFS
HHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QLGIAAGLVTVATGHVVLCTPFVALTVRARLSGYDRTLEEAAMDLGAREWTTFWRVTMPA
HHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
IWPGVLSGALLAFTLSLDDYVLALFTAGPGATTLPLRIFSMVRFSITPEINALSTLWVVG
HHHHHHHHHHHHHHCCHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VSLVLLVAQRFSRSIGVATKD
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]