| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is cdsA [H]
Identifier: 37520965
GI number: 37520965
Start: 1499010
End: 1499813
Strand: Reverse
Name: cdsA [H]
Synonym: gll1396
Alternate gene names: 37520965
Gene position: 1499813-1499010 (Counterclockwise)
Preceding gene: 37520971
Following gene: 37520963
Centisome position: 32.19
GC content: 62.94
Gene sequence:
>804_bases ATGTCGGCCCGCATCCTCAGCGCGAGTGTTCTCATCCCCGTGGTCCTGCTGGCCATCTACCTCGGGGGCTGGTTTTTCAC CCTGGCGCTCGCGGTACTGGTGGTGCTGGGGCAGATCGAGTTTTTTGAGATTGTCCGCCGCAAGGGCTACCGGCCCACCG AGAACCTCTGCCTGGGTCTGAGCCTGACGCTGCTTGCCATTCAGCAGCTCTATCCGCAACTGGCCAATGGTGCCTTTGTG CTGGCCGGGGGGCTGGTGTGCGTGTCGCTGCTGTTTCGCCGCCAGCCCCCGGCCACGATCTCCGATATGGCCACCAGTCT TCTGGGGCTTTTCTACACCGGCTATTTGCCCAGTTTCTTGGTGCAGCTTCGAGCCCTCGATGGATTGGGCTATCTGCTGC TGCTTACCTTTGCCTGCATCTGGGCCTCGGATATCGGCGCGTTTTTCTTCGGCAAGGCTTTCGGCCGCACACCGCTCACA CCCATCAGCCCCAAAAAGACCGTCGAAGGAGCAATCTTCGGCACGACGGCGAGCATTCTGGTCGGTCTGGCCGGGGCCGC CCTGCTGGGCTGGTCGCTCTGGCCCCTCACCGGCGTCGTCTTTGGGTTGCTCGTGGGCGTGAGCGGGCTGTTGGGCGACC TGACCGAGTCGCTGATGAAGCGCGATGTCGGCCTCAAGGACGCGGGCAACTTGATCCCCGGCCACGGCGGCATTCTCGAC CGCGCCGACAGCTACATCTTCACCGCCCCGGTCGCTTTTTACTTCATCGATTTCATCGTCCTGGGCCGCCTGCCGTTGCC TTGA
Upstream 100 bases:
>100_bases TGCCGCCCGATGCCAAAAAGCCATGACCTTTTGTCGGTACCATCGCATTATCCCCCGCTCGCCGTAGGGTCGGGCCGGTG CGCGCGCCTATAGTGGTTGC
Downstream 100 bases:
>100_bases TCACTCGTCCAGGTTGCCCCAGGGCGGAGCGTCCCCCGAGCCGCCAATTACCAAGCGCTCGACGGGCAGATACTCTTGAT TTAGAGTCTGCACGGCATTG
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSARILSASVLIPVVLLAIYLGGWFFTLALAVLVVLGQIEFFEIVRRKGYRPTENLCLGLSLTLLAIQQLYPQLANGAFV LAGGLVCVSLLFRRQPPATISDMATSLLGLFYTGYLPSFLVQLRALDGLGYLLLLTFACIWASDIGAFFFGKAFGRTPLT PISPKKTVEGAIFGTTASILVGLAGAALLGWSLWPLTGVVFGLLVGVSGLLGDLTESLMKRDVGLKDAGNLIPGHGGILD RADSYIFTAPVAFYFIDFIVLGRLPLP
Sequences:
>Translated_267_residues MSARILSASVLIPVVLLAIYLGGWFFTLALAVLVVLGQIEFFEIVRRKGYRPTENLCLGLSLTLLAIQQLYPQLANGAFV LAGGLVCVSLLFRRQPPATISDMATSLLGLFYTGYLPSFLVQLRALDGLGYLLLLTFACIWASDIGAFFFGKAFGRTPLT PISPKKTVEGAIFGTTASILVGLAGAALLGWSLWPLTGVVFGLLVGVSGLLGDLTESLMKRDVGLKDAGNLIPGHGGILD RADSYIFTAPVAFYFIDFIVLGRLPLP >Mature_266_residues SARILSASVLIPVVLLAIYLGGWFFTLALAVLVVLGQIEFFEIVRRKGYRPTENLCLGLSLTLLAIQQLYPQLANGAFVL AGGLVCVSLLFRRQPPATISDMATSLLGLFYTGYLPSFLVQLRALDGLGYLLLLTFACIWASDIGAFFFGKAFGRTPLTP ISPKKTVEGAIFGTTASILVGLAGAALLGWSLWPLTGVVFGLLVGVSGLLGDLTESLMKRDVGLKDAGNLIPGHGGILDR ADSYIFTAPVAFYFIDFIVLGRLPLP
Specific function: Unknown
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI1787677, Length=118, Percent_Identity=47.4576271186441, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI87081696, Length=128, Percent_Identity=43.75, Blast_Score=98, Evalue=4e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 28503; Mature: 28372
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARILSASVLIPVVLLAIYLGGWFFTLALAVLVVLGQIEFFEIVRRKGYRPTENLCLGL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHH SLTLLAIQQLYPQLANGAFVLAGGLVCVSLLFRRQPPATISDMATSLLGLFYTGYLPSFL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VQLRALDGLGYLLLLTFACIWASDIGAFFFGKAFGRTPLTPISPKKTVEGAIFGTTASIL HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHH VGLAGAALLGWSLWPLTGVVFGLLVGVSGLLGDLTESLMKRDVGLKDAGNLIPGHGGILD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH RADSYIFTAPVAFYFIDFIVLGRLPLP CCCCEEHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SARILSASVLIPVVLLAIYLGGWFFTLALAVLVVLGQIEFFEIVRRKGYRPTENLCLGL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHH SLTLLAIQQLYPQLANGAFVLAGGLVCVSLLFRRQPPATISDMATSLLGLFYTGYLPSFL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VQLRALDGLGYLLLLTFACIWASDIGAFFFGKAFGRTPLTPISPKKTVEGAIFGTTASIL HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHH VGLAGAALLGWSLWPLTGVVFGLLVGVSGLLGDLTESLMKRDVGLKDAGNLIPGHGGILD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH RADSYIFTAPVAFYFIDFIVLGRLPLP CCCCEEHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]