Click here to switch to the map view.

The map label for this gene is 37520963

Identifier: 37520963

GI number: 37520963

Start: 1496917

End: 1498482

Strand: Reverse

Name: 37520963

Synonym: gll1394

Alternate gene names: NA

Gene position: 1498482-1496917 (Counterclockwise)

Preceding gene: 37520965

Following gene: 37520962

Centisome position: 32.16

GC content: 61.94

Gene sequence:

>1566_bases
ATGCCCTCACCGTCCTCCGCCGCCCGGCCCGAGCGCATTCTCTACGTGCGCCTGCCCTGCAACCCGATTTTTCCGATCGG
CGTCGTCTATCTTGCCGATCACGTCCACAAGCTTTTTCCGACCATCGAGCAGGAGATCTTTGATCTGGGCGCGGTGCCCC
CGCTCGATTTTTACAAAGCCCTCGAAGACAAGATCATCACCTTCAAGCCGAGCCTGCTGGTCTACTCCTGGCGCGACATC
CAGATCTACGCGCCCGTGGGCGGCCGGGCGGGCAACCCCCTGCAGAACGCCTTTCAGCTTTTTTATTCCGAGAACCCTTT
GGAGCGCGTGCAGGGAGCCCTGGGCGGTTTGCGTCTGGCCACCGATTATTACGGCGAACTGTGGCGCAATCTGGGCCTGA
TCCGCCGCGGCTACGCCATGGCCCGCGCCCACAACCGCGAGGCCCGGGTGGTGGTGGGGGGCGGCGCCATCTCGGTGTTC
TACGAGCAACTCGCTTCTCAGCTTCCCCAGGGCACGATCGTCTCGGTGGGCGAGGGGGAAACGCTTTTTGAGAAACTCCT
GCGCGGCGAGGATATCGCCTCCGAGCGCTGCTACGTGGTCGGCCGCACCCGGCCGCGGCCGGGTCTGGTGGCCGAGCCCC
CCACCCCGATGGTCAAGACCGCCTGCAATTACGATTACATCGGGCAAATCTGGCCGCAGTTCGACTACTACCTGGACGGG
GACTTTTATATCGGTGTGCAGACCAAGCGCGGCTGTCCCCACAACTGCATCTACTGCATCTACACCGTCGTCGAGGGCAA
GCAGGTGCGCGTCAACCCGGCCCATGAGGTGGTCCGGGAGATGCGCCAGCTCTACGACCGGGGCATCCGCAATTTCTGGT
TCACCGATGCCCAGTTTGTGCCGTCCAAGAAATATATTGCCGACTGCATCGAACTACTCGGGGCGATCAAAGCCTCGGGT
ATGCAGGATATCCACTGGGCCGCCTACATCCGCGCCGACAATCTGCCCCCCGAACTCACCCGCCTGATGGTCGAGACCGG
CATGAACTACTTCGAAATCGGCATCACCTCCGGCTCCCAGTCGCTGGTGCGCAAGATGCGCTTGGGCTACAACCTGCGCA
CGGTGCTCGAAAACTGCCGCCACCTCAAAACGAGCGGCTTCAACGATCTGGTCTCGGTCAACTATTCGTTTAACGTCATC
GGCGAGACCCACCAGACCATCCGCGAGACGATCGCCTTTCACCGCGAACTGGAGGCGATTTTTGGCCGCGATAAAGTCGA
ACCGGCGATTTTCTTCATCGGCCTGCAACCGCACACGGGCCTTGAAGAATACGCCCTCGACAACCGCATCCTCAAGCCGG
GCTACGACCCGATGAGCATGATGCCCTGGACGGCCTCCAAGATGCTGTGGAACCCGGAACCGCTGGGAGCTTTCTTCGGC
CGCGTCTGCCTCGAAGCCTGGCGGCGCGATTCCAACGACTTTGGCCGCACAGTGATGGATATTCTCGAAACCCGCCTGGG
GCGAGCCGCACTGGCCGAGGCCCTCAGTGCTCCGGTCGCTGTCTAA

Upstream 100 bases:

>100_bases
TGCATGGCGTCGGTGGGGTGGCTCTCCCGACGATATCACCTGCCCCGGCACCCGCAAGTAAGATGAAAGTGACAGTTCTT
CACAAAAAAGCGCAAAAACG

Downstream 100 bases:

>100_bases
CAACCCGCGCACCTGGGCTGCGGGTTACTATGATTGGATAAGTTTGCAGTCAACTCAGCCGTAGCAAAGGCGCGGGAGGG
TGCGGTTCGATGGAACGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 520

Protein sequence:

>521_residues
MPSPSSAARPERILYVRLPCNPIFPIGVVYLADHVHKLFPTIEQEIFDLGAVPPLDFYKALEDKIITFKPSLLVYSWRDI
QIYAPVGGRAGNPLQNAFQLFYSENPLERVQGALGGLRLATDYYGELWRNLGLIRRGYAMARAHNREARVVVGGGAISVF
YEQLASQLPQGTIVSVGEGETLFEKLLRGEDIASERCYVVGRTRPRPGLVAEPPTPMVKTACNYDYIGQIWPQFDYYLDG
DFYIGVQTKRGCPHNCIYCIYTVVEGKQVRVNPAHEVVREMRQLYDRGIRNFWFTDAQFVPSKKYIADCIELLGAIKASG
MQDIHWAAYIRADNLPPELTRLMVETGMNYFEIGITSGSQSLVRKMRLGYNLRTVLENCRHLKTSGFNDLVSVNYSFNVI
GETHQTIRETIAFHRELEAIFGRDKVEPAIFFIGLQPHTGLEEYALDNRILKPGYDPMSMMPWTASKMLWNPEPLGAFFG
RVCLEAWRRDSNDFGRTVMDILETRLGRAALAEALSAPVAV

Sequences:

>Translated_521_residues
MPSPSSAARPERILYVRLPCNPIFPIGVVYLADHVHKLFPTIEQEIFDLGAVPPLDFYKALEDKIITFKPSLLVYSWRDI
QIYAPVGGRAGNPLQNAFQLFYSENPLERVQGALGGLRLATDYYGELWRNLGLIRRGYAMARAHNREARVVVGGGAISVF
YEQLASQLPQGTIVSVGEGETLFEKLLRGEDIASERCYVVGRTRPRPGLVAEPPTPMVKTACNYDYIGQIWPQFDYYLDG
DFYIGVQTKRGCPHNCIYCIYTVVEGKQVRVNPAHEVVREMRQLYDRGIRNFWFTDAQFVPSKKYIADCIELLGAIKASG
MQDIHWAAYIRADNLPPELTRLMVETGMNYFEIGITSGSQSLVRKMRLGYNLRTVLENCRHLKTSGFNDLVSVNYSFNVI
GETHQTIRETIAFHRELEAIFGRDKVEPAIFFIGLQPHTGLEEYALDNRILKPGYDPMSMMPWTASKMLWNPEPLGAFFG
RVCLEAWRRDSNDFGRTVMDILETRLGRAALAEALSAPVAV
>Mature_520_residues
PSPSSAARPERILYVRLPCNPIFPIGVVYLADHVHKLFPTIEQEIFDLGAVPPLDFYKALEDKIITFKPSLLVYSWRDIQ
IYAPVGGRAGNPLQNAFQLFYSENPLERVQGALGGLRLATDYYGELWRNLGLIRRGYAMARAHNREARVVVGGGAISVFY
EQLASQLPQGTIVSVGEGETLFEKLLRGEDIASERCYVVGRTRPRPGLVAEPPTPMVKTACNYDYIGQIWPQFDYYLDGD
FYIGVQTKRGCPHNCIYCIYTVVEGKQVRVNPAHEVVREMRQLYDRGIRNFWFTDAQFVPSKKYIADCIELLGAIKASGM
QDIHWAAYIRADNLPPELTRLMVETGMNYFEIGITSGSQSLVRKMRLGYNLRTVLENCRHLKTSGFNDLVSVNYSFNVIG
ETHQTIRETIAFHRELEAIFGRDKVEPAIFFIGLQPHTGLEEYALDNRILKPGYDPMSMMPWTASKMLWNPEPLGAFFGR
VCLEAWRRDSNDFGRTVMDILETRLGRAALAEALSAPVAV

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 58958; Mature: 58826

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPSSAARPERILYVRLPCNPIFPIGVVYLADHVHKLFPTIEQEIFDLGAVPPLDFYKA
CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LEDKIITFKPSLLVYSWRDIQIYAPVGGRAGNPLQNAFQLFYSENPLERVQGALGGLRLA
HHCCEEEECCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHH
TDYYGELWRNLGLIRRGYAMARAHNREARVVVGGGAISVFYEQLASQLPQGTIVSVGEGE
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCH
TLFEKLLRGEDIASERCYVVGRTRPRPGLVAEPPTPMVKTACNYDYIGQIWPQFDYYLDG
HHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHHCCCCCEEECC
DFYIGVQTKRGCPHNCIYCIYTVVEGKQVRVNPAHEVVREMRQLYDRGIRNFWFTDAQFV
CEEEEEEECCCCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PSKKYIADCIELLGAIKASGMQDIHWAAYIRADNLPPELTRLMVETGMNYFEIGITSGSQ
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCHH
SLVRKMRLGYNLRTVLENCRHLKTSGFNDLVSVNYSFNVIGETHQTIRETIAFHRELEAI
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECEEEEEECCHHHHHHHHHHHHHHHHHH
FGRDKVEPAIFFIGLQPHTGLEEYALDNRILKPGYDPMSMMPWTASKMLWNPEPLGAFFG
HCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHH
RVCLEAWRRDSNDFGRTVMDILETRLGRAALAEALSAPVAV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PSPSSAARPERILYVRLPCNPIFPIGVVYLADHVHKLFPTIEQEIFDLGAVPPLDFYKA
CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LEDKIITFKPSLLVYSWRDIQIYAPVGGRAGNPLQNAFQLFYSENPLERVQGALGGLRLA
HHCCEEEECCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCHHHH
TDYYGELWRNLGLIRRGYAMARAHNREARVVVGGGAISVFYEQLASQLPQGTIVSVGEGE
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCEEEECCCH
TLFEKLLRGEDIASERCYVVGRTRPRPGLVAEPPTPMVKTACNYDYIGQIWPQFDYYLDG
HHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCCHHHHHCCCCCEEECC
DFYIGVQTKRGCPHNCIYCIYTVVEGKQVRVNPAHEVVREMRQLYDRGIRNFWFTDAQFV
CEEEEEEECCCCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PSKKYIADCIELLGAIKASGMQDIHWAAYIRADNLPPELTRLMVETGMNYFEIGITSGSQ
CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCHH
SLVRKMRLGYNLRTVLENCRHLKTSGFNDLVSVNYSFNVIGETHQTIRETIAFHRELEAI
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECEEEEEECCHHHHHHHHHHHHHHHHHH
FGRDKVEPAIFFIGLQPHTGLEEYALDNRILKPGYDPMSMMPWTASKMLWNPEPLGAFFG
HCCCCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHH
RVCLEAWRRDSNDFGRTVMDILETRLGRAALAEALSAPVAV
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]