| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37520851
Identifier: 37520851
GI number: 37520851
Start: 1363389
End: 1364024
Strand: Direct
Name: 37520851
Synonym: glr1282
Alternate gene names: NA
Gene position: 1363389-1364024 (Clockwise)
Preceding gene: 37520848
Following gene: 37520852
Centisome position: 29.26
GC content: 68.08
Gene sequence:
>636_bases ATGGCCGAATCCCGTCCGATGCCTTTGTTTGTTGCCGATCACCTTGCGCTCGACTTTTTGAACAGCCGGGCGGCGCCGTC GGGGACGCCCATTGAGTGGCTGGCCAACGGCAAGGACCTGCTCGCCTGGCTGCAATTGGCCGGGCTCCTCGACCGCGAAA CGGCGCGGCGCCTGGCGGTCGAGCACCCGCCCGAAGCGCTCGATACCGTTGCAGGCGAGGCGCGCGCCCTGCGCGAGTGG CTGCGCGGGTTTGTCGCGGGCCAGGCCGGAGGCGAGCTGGGCAAGCAGGTGCTCGGCGAGCTGGAGCCGCTCAACCGTCT GCTTGCCGGGGAAGAGGCTTACCGGCAGATCGCGTGGGGAGAAGCGGGCAAACCGGTCTGCCGAATCCACCGGCGGTGGA TCCACCCGCAGCAGCTGTTGCAGCCGGTGGCCGAAGTGATGGCCGATCTGGTCTGCCGCGTCGATTTTGCCCTGGTGCGC CATTGTGAGGGAACAAACTGCACGCTGTGGTTTGTTGACACGACCAAGAGCCATTCGCGCCGCTGGTGCAGCATGGCCCT GTGCGGCAACCGCGCTAAGGCGGCTGCCCACCGCAGTCGGGCGAAGCACCCGCCTGGTCGCACCGCCGGGCCATGA
Upstream 100 bases:
>100_bases CATGAGATTGATAACCGGCCAAGTTATTTTTTGATGGTTATGCAAGAATGGGCATAGGCGCCCCCGGGGGTGCTGCTCAC ACCCCAGCAAGACCCGCGAA
Downstream 100 bases:
>100_bases TGGCGATCAAGGTTTTTGCGGCGGGCGCCGCGTCAATGTAGTGAGACTCCGTTATTGCGTCAGGAGAGCATCATGCAGGT GATTTCGGTCAATGTCGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MAESRPMPLFVADHLALDFLNSRAAPSGTPIEWLANGKDLLAWLQLAGLLDRETARRLAVEHPPEALDTVAGEARALREW LRGFVAGQAGGELGKQVLGELEPLNRLLAGEEAYRQIAWGEAGKPVCRIHRRWIHPQQLLQPVAEVMADLVCRVDFALVR HCEGTNCTLWFVDTTKSHSRRWCSMALCGNRAKAAAHRSRAKHPPGRTAGP
Sequences:
>Translated_211_residues MAESRPMPLFVADHLALDFLNSRAAPSGTPIEWLANGKDLLAWLQLAGLLDRETARRLAVEHPPEALDTVAGEARALREW LRGFVAGQAGGELGKQVLGELEPLNRLLAGEEAYRQIAWGEAGKPVCRIHRRWIHPQQLLQPVAEVMADLVCRVDFALVR HCEGTNCTLWFVDTTKSHSRRWCSMALCGNRAKAAAHRSRAKHPPGRTAGP >Mature_210_residues AESRPMPLFVADHLALDFLNSRAAPSGTPIEWLANGKDLLAWLQLAGLLDRETARRLAVEHPPEALDTVAGEARALREWL RGFVAGQAGGELGKQVLGELEPLNRLLAGEEAYRQIAWGEAGKPVCRIHRRWIHPQQLLQPVAEVMADLVCRVDFALVRH CEGTNCTLWFVDTTKSHSRRWCSMALCGNRAKAAAHRSRAKHPPGRTAGP
Specific function: Unknown
COG id: COG5516
COG function: function code R; Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23316; Mature: 23185
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESRPMPLFVADHLALDFLNSRAAPSGTPIEWLANGKDLLAWLQLAGLLDRETARRLAV CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH EHPPEALDTVAGEARALREWLRGFVAGQAGGELGKQVLGELEPLNRLLAGEEAYRQIAWG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EAGKPVCRIHRRWIHPQQLLQPVAEVMADLVCRVDFALVRHCEGTNCTLWFVDTTKSHSR CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHH RWCSMALCGNRAKAAAHRSRAKHPPGRTAGP HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AESRPMPLFVADHLALDFLNSRAAPSGTPIEWLANGKDLLAWLQLAGLLDRETARRLAV CCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH EHPPEALDTVAGEARALREWLRGFVAGQAGGELGKQVLGELEPLNRLLAGEEAYRQIAWG CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC EAGKPVCRIHRRWIHPQQLLQPVAEVMADLVCRVDFALVRHCEGTNCTLWFVDTTKSHSR CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHH RWCSMALCGNRAKAAAHRSRAKHPPGRTAGP HHHHHHHHCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA