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The map label for this gene is nblB

Identifier: 37520826

GI number: 37520826

Start: 1333480

End: 1334133

Strand: Direct

Name: nblB

Synonym: gvip178

Alternate gene names: NA

Gene position: 1333480-1334133 (Clockwise)

Preceding gene: 37520822

Following gene: 37520828

Centisome position: 28.62

GC content: 66.51

Gene sequence:

>654_bases
ATGGACATCGACGCGGTCCGCGAAGCTCTTGCAAGCGACAACCCGCAGGACCGCCTGCGGGGATTGACCCAGTTGCGCAA
CAGCGACCCCGAGACGGCGGTGCCGCTGTTGCTCGCCAAGCGGCGCGACCCCGAATTTATGGTGCGCTCGTTTGTGGCGA
TGGGACTCGGGCGGCACCGCACCGAGGAGTCCTTTGCAGCGCTGCTGGAATTGCTCAAAGGCGACGGGGACTATAACGTG
CGCGCCGAGGCGGCCAATTCGCTGTCGATGTACGGCGAGAGCGCCCTGCTCCATCTGCTGGAAGCGTTTCGCTTCGACGA
TCAATGGCTGGTGCGCCGCAGCATCCTGGCGGCGCTGATTGAATCGCCCCACACCGAAGCGCTTTACCAAATCTGCGTCC
TCGCCCTCGAAGACGCCGACCTGACTGTGGTTGAAGCGGGAATCGACGGATTGGGGGCGCTCGGGCGTACCGAAAAGCGC
GCCGAGGCGCTGGCGCTGCTGCTACCCAAGGTGGGAGACCAGGAGTGGCGCACGCGCTACCGTGTCGCCCGCGCCCTGCA
ACCCCACGCGGACGACCCGAGGGCGAAGGCGGCACTTGCCTACTTGGCGCGCGACGAGGACCGGCGCGTTGCCACAGCGG
CGGGTTCGCAGTAG

Upstream 100 bases:

>100_bases
TGCTCCTTGCGTCGTCACCAGCCATAGTAGCGCCCGCACCTATCTGTACCGGGAAGCAAATCATTGTTAAAAATGGTAAA
AACTGCTACCGGATATACCC

Downstream 100 bases:

>100_bases
AGGCTCAGCTTTCGAGGCTGGCGCGCGTCGTGGTGCGCGTAAACGGGTTCCAGGTGTCCAGTTCGCGGGCCGGGCGGGAA
GTGAGGCGGGCTTTGGCCGC

Product: phycocyanin alpha phycocyanobilin lyase related protein NblB-like protein

Products: NA

Alternate protein names: PBS Lyase HEAT Domain Protein Repeat-Containing Protein; PBS Lyase HEAT-Like Repeat Domain Protein; Heat Domain-Containing Protein; CotB Mutant; HEAT Repeat-Containing Protein; HEAT Domain Containing Protein

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MDIDAVREALASDNPQDRLRGLTQLRNSDPETAVPLLLAKRRDPEFMVRSFVAMGLGRHRTEESFAALLELLKGDGDYNV
RAEAANSLSMYGESALLHLLEAFRFDDQWLVRRSILAALIESPHTEALYQICVLALEDADLTVVEAGIDGLGALGRTEKR
AEALALLLPKVGDQEWRTRYRVARALQPHADDPRAKAALAYLARDEDRRVATAAGSQ

Sequences:

>Translated_217_residues
MDIDAVREALASDNPQDRLRGLTQLRNSDPETAVPLLLAKRRDPEFMVRSFVAMGLGRHRTEESFAALLELLKGDGDYNV
RAEAANSLSMYGESALLHLLEAFRFDDQWLVRRSILAALIESPHTEALYQICVLALEDADLTVVEAGIDGLGALGRTEKR
AEALALLLPKVGDQEWRTRYRVARALQPHADDPRAKAALAYLARDEDRRVATAAGSQ
>Mature_217_residues
MDIDAVREALASDNPQDRLRGLTQLRNSDPETAVPLLLAKRRDPEFMVRSFVAMGLGRHRTEESFAALLELLKGDGDYNV
RAEAANSLSMYGESALLHLLEAFRFDDQWLVRRSILAALIESPHTEALYQICVLALEDADLTVVEAGIDGLGALGRTEKR
AEALALLLPKVGDQEWRTRYRVARALQPHADDPRAKAALAYLARDEDRRVATAAGSQ

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24020; Mature: 24020

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIDAVREALASDNPQDRLRGLTQLRNSDPETAVPLLLAKRRDPEFMVRSFVAMGLGRHR
CCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
TEESFAALLELLKGDGDYNVRAEAANSLSMYGESALLHLLEAFRFDDQWLVRRSILAALI
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ESPHTEALYQICVLALEDADLTVVEAGIDGLGALGRTEKRAEALALLLPKVGDQEWRTRY
HCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHH
RVARALQPHADDPRAKAALAYLARDEDRRVATAAGSQ
HHHHHHCCCCCCHHHHHHHHHHHCCCCCEEHHCCCCC
>Mature Secondary Structure
MDIDAVREALASDNPQDRLRGLTQLRNSDPETAVPLLLAKRRDPEFMVRSFVAMGLGRHR
CCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
TEESFAALLELLKGDGDYNVRAEAANSLSMYGESALLHLLEAFRFDDQWLVRRSILAALI
CHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
ESPHTEALYQICVLALEDADLTVVEAGIDGLGALGRTEKRAEALALLLPKVGDQEWRTRY
HCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHH
RVARALQPHADDPRAKAALAYLARDEDRRVATAAGSQ
HHHHHHCCCCCCHHHHHHHHHHHCCCCCEEHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA