| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yjgI [C]
Identifier: 37520797
GI number: 37520797
Start: 1306260
End: 1307009
Strand: Reverse
Name: yjgI [C]
Synonym: gll1228
Alternate gene names: 37520797
Gene position: 1307009-1306260 (Counterclockwise)
Preceding gene: 37520805
Following gene: 37520795
Centisome position: 28.05
GC content: 63.6
Gene sequence:
>750_bases ATGGGCGCGTTAAAAGACAAGAATGTCGTGGTGGTTGGTGGCAGTCGCGGCGTGGGCCGGATCATTGTCGAAGCGGCGAT CGCTGAAGGTGCCTGCGTGCTCGCGGTGGCTCGGGGGCAGGAGGCGCTTGCTCAGTTGTCGCGTGAGGTGCCCGAGGCGG CTACGCTCGTTTGCGACGCAACCGAAGAGGGCGCTCCTGCGGTGGTGTTCGCGGCCCTCCAGCCTGATGTATTGGTGGTT TGCGCCGGAGCCATACCGCCAAGCACGCCCGTACAGGAGCAGAGCTGGATTGAGTTCTCGGTGAATTGGGAGGCGGACGT GAAAGCGTCGTTTCTATTTTGCAAAGCTGCCTTGCTCCAGCCGCTGGCACCGGGCGCATTGGTCATCCTGATTTCGAGCG GAGCGGGTCTGGGAGGGTCGCCGATTTCTGGGGGCTATGCCGGGTCGAAGCGGATGCAGATGTTTCTCGCCGGTTACACT CAGAAGGAATCGGATCGGCTCGCGCTCGGGCTGAGGTTTCTGGCGCTCGCGCCCGGTGGGATCATGCCGGACACCGGCGT CGGCGATGCGGCCGTCGCGGGCTACTCGCGCTATCTCGGTATATCGGCTTCGGATTTTGTGCGCAGGAGGGCTGATCCGC CGTCACCTGAGGATGTCGCGCGTGCGGTCATCGGTTTCGCAGATGCTAGCCGGACTGCCGACGGAGCTGCTTTCGTCGTC ACAGGAAGCGGTGTAGCGCCGCTTCGGTGA
Upstream 100 bases:
>100_bases GGTCATGGCTCGATGCCGTCGTTTGGTTACTTGCATTTTACAAGCTACTCCTGCTAAGCTGCGCACTAACTTGCAACTTA AAAGTCAAGAGGTAGAGCCC
Downstream 100 bases:
>100_bases GATACATCGTCGCAGGGCCGGGGAGGCGAGCCGACAGCTGAAGGCAGTTGCTTTTCGCAACTAATCCCCGAAGGACCGCA CCTAGCGCTTGCACCCTGCG
Product: short-chain dehydrogenase
Products: NA
Alternate protein names: Short-Chain Dehydrogenase; Dehydrogenase/Oxidoreductase; 3-Oxoacyl-(Acyl-Carrier Protein) Reductase
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MGALKDKNVVVVGGSRGVGRIIVEAAIAEGACVLAVARGQEALAQLSREVPEAATLVCDATEEGAPAVVFAALQPDVLVV CAGAIPPSTPVQEQSWIEFSVNWEADVKASFLFCKAALLQPLAPGALVILISSGAGLGGSPISGGYAGSKRMQMFLAGYT QKESDRLALGLRFLALAPGGIMPDTGVGDAAVAGYSRYLGISASDFVRRRADPPSPEDVARAVIGFADASRTADGAAFVV TGSGVAPLR
Sequences:
>Translated_249_residues MGALKDKNVVVVGGSRGVGRIIVEAAIAEGACVLAVARGQEALAQLSREVPEAATLVCDATEEGAPAVVFAALQPDVLVV CAGAIPPSTPVQEQSWIEFSVNWEADVKASFLFCKAALLQPLAPGALVILISSGAGLGGSPISGGYAGSKRMQMFLAGYT QKESDRLALGLRFLALAPGGIMPDTGVGDAAVAGYSRYLGISASDFVRRRADPPSPEDVARAVIGFADASRTADGAAFVV TGSGVAPLR >Mature_248_residues GALKDKNVVVVGGSRGVGRIIVEAAIAEGACVLAVARGQEALAQLSREVPEAATLVCDATEEGAPAVVFAALQPDVLVVC AGAIPPSTPVQEQSWIEFSVNWEADVKASFLFCKAALLQPLAPGALVILISSGAGLGGSPISGGYAGSKRMQMFLAGYTQ KESDRLALGLRFLALAPGGIMPDTGVGDAAVAGYSRYLGISASDFVRRRADPPSPEDVARAVIGFADASRTADGAAFVVT GSGVAPLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.-.-.- [C]
Molecular weight: Translated: 25298; Mature: 25167
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGALKDKNVVVVGGSRGVGRIIVEAAIAEGACVLAVARGQEALAQLSREVPEAATLVCDA CCCCCCCCEEEEECCCCCHHHHEEHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEEEEEC TEEGAPAVVFAALQPDVLVVCAGAIPPSTPVQEQSWIEFSVNWEADVKASFLFCKAALLQ CCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHC PLAPGALVILISSGAGLGGSPISGGYAGSKRMQMFLAGYTQKESDRLALGLRFLALAPGG CCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHEEEEECCCCCCCCHHHHHEEEEEECCCC IMPDTGVGDAAVAGYSRYLGISASDFVRRRADPPSPEDVARAVIGFADASRTADGAAFVV CCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEE TGSGVAPLR ECCCCCCCC >Mature Secondary Structure GALKDKNVVVVGGSRGVGRIIVEAAIAEGACVLAVARGQEALAQLSREVPEAATLVCDA CCCCCCCEEEEECCCCCHHHHEEHHHCCCEEEEEEECCHHHHHHHHHHCCCCEEEEEEC TEEGAPAVVFAALQPDVLVVCAGAIPPSTPVQEQSWIEFSVNWEADVKASFLFCKAALLQ CCCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHC PLAPGALVILISSGAGLGGSPISGGYAGSKRMQMFLAGYTQKESDRLALGLRFLALAPGG CCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHEEEEECCCCCCCCHHHHHEEEEEECCCC IMPDTGVGDAAVAGYSRYLGISASDFVRRRADPPSPEDVARAVIGFADASRTADGAAFVV CCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEE TGSGVAPLR ECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA