Click here to switch to the map view.

The map label for this gene is 37520785

Identifier: 37520785

GI number: 37520785

Start: 1293533

End: 1294396

Strand: Reverse

Name: 37520785

Synonym: gll1216

Alternate gene names: NA

Gene position: 1294396-1293533 (Counterclockwise)

Preceding gene: 37520786

Following gene: 37520784

Centisome position: 27.78

GC content: 66.67

Gene sequence:

>864_bases
ATGACTTCTATGGATGTTCCCAATCGCGATCCTGTGCTCGGCGGCAAGGCCGCACCACCCGACGCTCCGGCCCTGGGGGG
CTTCGCGGGCCTGCGGCTACGGCTGCTGCAGTCGACAAGCCCCGAGGAGCGCCGGGCGGCGCTTCGCAAGGCGCCGGACT
GGGGCGAGAAGGGCCTCAAATTGCTGCTGGTCGTTCTTGGACAGGACGCGGATCCGCACGTTCGCCAAGAAGCCTGGGAA
CTGCTGGCTTCTCGCATGGAGAGTGCACCGTGGCTTCGAAATCCGTCGCAATCGCTTCCCCGCCGCGACATCGGCGGACG
CAGGGGTCTCATCCGCTGCTACGAACGGGGCGAAAACCTCGCCTGTGCCGACCTGCGCGCAGAGAATCTTTGCCGGATGA
ATCTGAGCTTTGCGGTGCTGCCGTTTGCCGATTTGAGCGGTGCGGATCTGAGCCGCTCGGTCAACCTCAAACGGGCGGAT
TTGCGTGGGGCACGGCTGGTGGGAGCGGATCTTCGAGGGGCCTTCCTGCACGGAGCCAACCTGTCCGGCAGCCGGTTGGA
AGCGGCGGATCTCATGAAGGTTGCGCTTGCCGGAGCCAACCTGAGCGGCGCGGACCTGTCCCGGGCGAACCTGCGCGCCG
CGCATCTGGAGGGCGCCGACCTGCGCCGCACCAATCTCGGTGAGGCGGACCTTGCCGGTGCTTTCTTGAGGGGCGCCCGC
CTGGAAGGGGCGGATCTGCGGCGCGCCCGTCTGGAAGGGGCGGACCTCGAATGCGCGGCCACCGAGGGAACGTGCTGGGA
AGGAGCGGATCTGGGTGGTGTCGCTTGGGCGGCTTTGTCCCGAGTAAAGCCCATTGATCTCTAG

Upstream 100 bases:

>100_bases
GACGAAGCACCCGAAGAAGTCAACGCCCACCTGCTCGCCTGGGGCGCCCGGCGGTCTTCGGCGCTGAGCCAGTAGCGCAC
CGCCGCGGCCGGGGAGGAGG

Downstream 100 bases:

>100_bases
CCCATCCCTTGTCCTCAAACACCGATCCGGTGCTCAGCGTCCCGGCCGCCCCGGTCACCGCCCCCGCTCTGGGCGGCCTC
GCGGGTGTGCGGATGCGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTSMDVPNRDPVLGGKAAPPDAPALGGFAGLRLRLLQSTSPEERRAALRKAPDWGEKGLKLLLVVLGQDADPHVRQEAWE
LLASRMESAPWLRNPSQSLPRRDIGGRRGLIRCYERGENLACADLRAENLCRMNLSFAVLPFADLSGADLSRSVNLKRAD
LRGARLVGADLRGAFLHGANLSGSRLEAADLMKVALAGANLSGADLSRANLRAAHLEGADLRRTNLGEADLAGAFLRGAR
LEGADLRRARLEGADLECAATEGTCWEGADLGGVAWAALSRVKPIDL

Sequences:

>Translated_287_residues
MTSMDVPNRDPVLGGKAAPPDAPALGGFAGLRLRLLQSTSPEERRAALRKAPDWGEKGLKLLLVVLGQDADPHVRQEAWE
LLASRMESAPWLRNPSQSLPRRDIGGRRGLIRCYERGENLACADLRAENLCRMNLSFAVLPFADLSGADLSRSVNLKRAD
LRGARLVGADLRGAFLHGANLSGSRLEAADLMKVALAGANLSGADLSRANLRAAHLEGADLRRTNLGEADLAGAFLRGAR
LEGADLRRARLEGADLECAATEGTCWEGADLGGVAWAALSRVKPIDL
>Mature_286_residues
TSMDVPNRDPVLGGKAAPPDAPALGGFAGLRLRLLQSTSPEERRAALRKAPDWGEKGLKLLLVVLGQDADPHVRQEAWEL
LASRMESAPWLRNPSQSLPRRDIGGRRGLIRCYERGENLACADLRAENLCRMNLSFAVLPFADLSGADLSRSVNLKRADL
RGARLVGADLRGAFLHGANLSGSRLEAADLMKVALAGANLSGADLSRANLRAAHLEGADLRRTNLGEADLAGAFLRGARL
EGADLRRARLEGADLECAATEGTCWEGADLGGVAWAALSRVKPIDL

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=159, Percent_Identity=35.2201257861635, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221377802, Length=152, Percent_Identity=38.8157894736842, Blast_Score=77, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 30637; Mature: 30506

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSMDVPNRDPVLGGKAAPPDAPALGGFAGLRLRLLQSTSPEERRAALRKAPDWGEKGLK
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHE
LLLVVLGQDADPHVRQEAWELLASRMESAPWLRNPSQSLPRRDIGGRRGLIRCYERGENL
EEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCE
ACADLRAENLCRMNLSFAVLPFADLSGADLSRSVNLKRADLRGARLVGADLRGAFLHGAN
EEEHHCHHHHEEECCEEEEEECCCCCCCCCCCCCCCCHHCCCCCEEECCCCCCEEEECCC
LSGSRLEAADLMKVALAGANLSGADLSRANLRAAHLEGADLRRTNLGEADLAGAFLRGAR
CCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHCCC
LEGADLRRARLEGADLECAATEGTCWEGADLGGVAWAALSRVKPIDL
CCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSMDVPNRDPVLGGKAAPPDAPALGGFAGLRLRLLQSTSPEERRAALRKAPDWGEKGLK
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHE
LLLVVLGQDADPHVRQEAWELLASRMESAPWLRNPSQSLPRRDIGGRRGLIRCYERGENL
EEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCE
ACADLRAENLCRMNLSFAVLPFADLSGADLSRSVNLKRADLRGARLVGADLRGAFLHGAN
EEEHHCHHHHEEECCEEEEEECCCCCCCCCCCCCCCCHHCCCCCEEECCCCCCEEEECCC
LSGSRLEAADLMKVALAGANLSGADLSRANLRAAHLEGADLRRTNLGEADLAGAFLRGAR
CCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHCCC
LEGADLRRARLEGADLECAATEGTCWEGADLGGVAWAALSRVKPIDL
CCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA