| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yugF [H]
Identifier: 37520786
GI number: 37520786
Start: 1294422
End: 1295315
Strand: Reverse
Name: yugF [H]
Synonym: gll1217
Alternate gene names: 37520786
Gene position: 1295315-1294422 (Counterclockwise)
Preceding gene: 37520794
Following gene: 37520785
Centisome position: 27.8
GC content: 68.12
Gene sequence:
>894_bases ATGCAATCTTCCGTAACACAGTGGTCCTGGCACGGTTACCCGGTGGCCTACCGCAGCGCCGGGGAGGCCCACAGCGACCG GCCGCCGATGGTGCTCATCCACGGCTTCGGCGCCTCGCTGGGCCACTGGCGCCGCAACCTGCCGGTCCTGGCGCAGGAGC ATCCTGTTTTTGCGCTGGATCTGGTGGGCTTTGGGGCGAGTGCCAAACCGAGCCCTGCCGAACTGGCCTACACCTTCGAG ACCTGGGGTCGGCAGGTCGGCGATTTTGTGCGCGAAGTGGTGGGCCGGCCGGCCATCCTGGTCGGCAACTCGATCGGCGC CATCGTGGCGCTGCAGGCGGCGGTGGGTGCTCCCGAGCGGACCGACAGCGTTGTACTGATCAACTGTTCGCTGCGACTCC TGCACGAGCGCAAGCGCCGGACGCTCCCCTGGCTGCGCCGCGCCGGGACGCCGCTATTGCAGCGGTTGCTCTCGGTACCG GCGGTGGGGCGCTTCTTTTTTAACCGGCTGCGCCGCCCCGAGAGCGTGCGCAAGATCCTCCAGCAAGCCTACGTGCGCCG CGAGGCGGTTACCGACGAACTGGTGGAAATGCTCACCCGCCCGGCTGCCGATCCAGGGGCAACGGCGGTGTTTCTGGCTT TTATCAACTACGCGAGCGGGCCGCTCGCCGAGGACTTGCTGCCCGAGGTGCGCTCGCCGGTGCTCATCCTCTGGGGTAAA GACGACCCCTGGGAGCCCTGTGCCCTGGGCCGCGCTCTCGCGGACTACCCGTGCGTCGAGAAATTTGTGCCCATCGAGCG GGCGGGCCACTGTCCGCAGGACGAAGCACCCGAAGAAGTCAACGCCCACCTGCTCGCCTGGGGCGCCCGGCGGTCTTCGG CGCTGAGCCAGTAG
Upstream 100 bases:
>100_bases GCGATCTGCATCCACGCTCTCCCACTGCGCGTTCGTAGCGCCTCATACTGTAGCACATTGCACTTTGCGCACAACCGCGC AGAGTGTTAGATGGTAGGTT
Downstream 100 bases:
>100_bases CGCACCGCCGCGGCCGGGGAGGAGGATGACTTCTATGGATGTTCCCAATCGCGATCCTGTGCTCGGCGGCAAGGCCGCAC CACCCGACGCTCCGGCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MQSSVTQWSWHGYPVAYRSAGEAHSDRPPMVLIHGFGASLGHWRRNLPVLAQEHPVFALDLVGFGASAKPSPAELAYTFE TWGRQVGDFVREVVGRPAILVGNSIGAIVALQAAVGAPERTDSVVLINCSLRLLHERKRRTLPWLRRAGTPLLQRLLSVP AVGRFFFNRLRRPESVRKILQQAYVRREAVTDELVEMLTRPAADPGATAVFLAFINYASGPLAEDLLPEVRSPVLILWGK DDPWEPCALGRALADYPCVEKFVPIERAGHCPQDEAPEEVNAHLLAWGARRSSALSQ
Sequences:
>Translated_297_residues MQSSVTQWSWHGYPVAYRSAGEAHSDRPPMVLIHGFGASLGHWRRNLPVLAQEHPVFALDLVGFGASAKPSPAELAYTFE TWGRQVGDFVREVVGRPAILVGNSIGAIVALQAAVGAPERTDSVVLINCSLRLLHERKRRTLPWLRRAGTPLLQRLLSVP AVGRFFFNRLRRPESVRKILQQAYVRREAVTDELVEMLTRPAADPGATAVFLAFINYASGPLAEDLLPEVRSPVLILWGK DDPWEPCALGRALADYPCVEKFVPIERAGHCPQDEAPEEVNAHLLAWGARRSSALSQ >Mature_297_residues MQSSVTQWSWHGYPVAYRSAGEAHSDRPPMVLIHGFGASLGHWRRNLPVLAQEHPVFALDLVGFGASAKPSPAELAYTFE TWGRQVGDFVREVVGRPAILVGNSIGAIVALQAAVGAPERTDSVVLINCSLRLLHERKRRTLPWLRRAGTPLLQRLLSVP AVGRFFFNRLRRPESVRKILQQAYVRREAVTDELVEMLTRPAADPGATAVFLAFINYASGPLAEDLLPEVRSPVLILWGK DDPWEPCALGRALADYPCVEKFVPIERAGHCPQDEAPEEVNAHLLAWGARRSSALSQ
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dmpD/todF/xylF esterase family [H]
Homologues:
Organism=Homo sapiens, GI50658087, Length=114, Percent_Identity=31.5789473684211, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24586385, Length=238, Percent_Identity=27.7310924369748, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24586387, Length=238, Percent_Identity=27.7310924369748, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24586391, Length=238, Percent_Identity=27.7310924369748, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24586389, Length=238, Percent_Identity=27.7310924369748, Blast_Score=71, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 32816; Mature: 32816
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSSVTQWSWHGYPVAYRSAGEAHSDRPPMVLIHGFGASLGHWRRNLPVLAQEHPVFALD CCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCHHHHHCCCCCEECCCCEEEEE LVGFGASAKPSPAELAYTFETWGRQVGDFVREVVGRPAILVGNSIGAIVALQAAVGAPER EECCCCCCCCCHHHEEEEHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCC TDSVVLINCSLRLLHERKRRTLPWLRRAGTPLLQRLLSVPAVGRFFFNRLRRPESVRKIL CCCEEEEECHHHHHHHHHHCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH QQAYVRREAVTDELVEMLTRPAADPGATAVFLAFINYASGPLAEDLLPEVRSPVLILWGK HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECC DDPWEPCALGRALADYPCVEKFVPIERAGHCPQDEAPEEVNAHLLAWGARRSSALSQ CCCCCHHHHHHHHHCCHHHHHHCCHHHCCCCCCCCCCHHHCCHHEEECCHHHHCCCC >Mature Secondary Structure MQSSVTQWSWHGYPVAYRSAGEAHSDRPPMVLIHGFGASLGHWRRNLPVLAQEHPVFALD CCCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCCCHHHHHCCCCCEECCCCEEEEE LVGFGASAKPSPAELAYTFETWGRQVGDFVREVVGRPAILVGNSIGAIVALQAAVGAPER EECCCCCCCCCHHHEEEEHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHCCCCC TDSVVLINCSLRLLHERKRRTLPWLRRAGTPLLQRLLSVPAVGRFFFNRLRRPESVRKIL CCCEEEEECHHHHHHHHHHCCHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHH QQAYVRREAVTDELVEMLTRPAADPGATAVFLAFINYASGPLAEDLLPEVRSPVLILWGK HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEECC DDPWEPCALGRALADYPCVEKFVPIERAGHCPQDEAPEEVNAHLLAWGARRSSALSQ CCCCCHHHHHHHHHCCHHHHHHCCHHHCCCCCCCCCCHHHCCHHEEECCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]