| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37520540
Identifier: 37520540
GI number: 37520540
Start: 1031843
End: 1033150
Strand: Direct
Name: 37520540
Synonym: glr0971
Alternate gene names: NA
Gene position: 1031843-1033150 (Clockwise)
Preceding gene: 37520539
Following gene: 37520541
Centisome position: 22.15
GC content: 67.43
Gene sequence:
>1308_bases GTGGCGGCGGGTCTCGGATTTTTTGCCTGGTGGCAGGTGATTCCGTTGGGGGTGGGTATGGTTCCCACCGACGGTGCCAC CGAGGTCGATCCGCGCGAGCCGGTCGTCATCGAGACTATCGGCCTCGGCAGCCGCCTGAGCGAGGTGCAGGTGCGGGACA ATCTCGGCCGCTCGGCGGCGGGCGAAAGCGACGGGCGGCGTCTTACCCTCAAGCCGCCCCTGGCCTTTGGGACCCGCTAC ACGATCACTGCGCGCGTCGAGCGCGAGTGGACGCAGCAGGCGGTCAGCGAAGTGATGCACTTCGAGACCGTCGCCATCCC CAGACTGTCCGGTTCCACCGAGCGGACGTTTAAGCCCGATCGCTCGGTGACGCTCCAGTTCGACCGACCGGTGGGCGAAT TGAGCGTGCTTGGCGATCTGGCCGTTGCTGTCGAGCCCGCCGCCGACCGCCGCTCCTTTCGCCTCGCGGCGAGCAACCCC ACCCAGGGCAAGCGCTACCCGGTGCAGCTCGCCTGGTCCACGACCACCGGTGTGCCTTTGCCGCCCCTGAAACTCGACCT GGTGGCGCCGCCGCCGTTGACGGTCAAGGCCAACGCCCGCGGCCTCGACAACCTCGGGCCGGCGTTGCCGCTGCAGTTTA CCTTCAGCGAGCCTCTGCTGGAGCGCGAGCAAGCGAGCAGCCACATCGCCGTGCAAACCGACAAAGGCGAGGCGATCGCA GGCAAGTGGCGCTGGGTGGGCAGTCGGCGGCTGCGCTTCACGCCCGCGGGCGGCTGGCCGTCTGTGAGCACCATTCGGGT GAGCGTCGGTGCGGACGGTCTTGCGGCCGTGGGCGGCGGTTATCTGGAGAAGCCGTTTGACTTCAGCTTCACCACCGGCA CCGACCGGCACATCTACATCTACCTCGACACCCAGAAAGTGGCGGCGGTCGAAAATGGCCGGGTGGTGCGCACTTTCCGG GTGAGCACCGGCAAAGCGGGCACCCCGACGGTCACCGGCAATTTCTACATCTACGACCGCTACGCCATCAAGACGATGCG CAGCCGCGCCGACCCGGGCGAGCCCGGCCACTACGTGGTCGAGAATGTCCCTTATGCCCAGTTTTTTCACGAGGGTTACG CCTTTCACGGTGCCTGGTGGCACAACGCCTTCGGCACCCGCGTCAGCCACGGCTGCGTGAATATGGCCACCCGCCGCTTC AACAAGCGCTCCGGCGTCTCCGAGGATGCCGGCTGGCTGTGGAAATGGGCCGCGATGGGCGTGCCGGTGACGGTGCTGGC GAAGACGCCTGCCCGGGCGGCCTCGTAA
Upstream 100 bases:
>100_bases CCGTTCCCTTGCTGCTCCTGCTGCGTTGTGAGGTAGTCCATTGAGCGAGGTTAAACAAGTTTTCCGCTGGGAACCGTCCA CCCGCTGGTTCGCCGCCGCT
Downstream 100 bases:
>100_bases AAAGCTTCAGGAAGTATCTACCATGCAAGGCTGGCATTGTGTGCAAAATTGCGGCGCCTGCTGCTACTTGGCTCCCGAGG AGCGGCCGTTTCTGGCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; ErfK/YbiS/YcfS/YnhG Superfamily Protein; ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Family; Lipoprotein Lpps; Secreted Protein; Secreted Lipoprotein
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MAAGLGFFAWWQVIPLGVGMVPTDGATEVDPREPVVIETIGLGSRLSEVQVRDNLGRSAAGESDGRRLTLKPPLAFGTRY TITARVEREWTQQAVSEVMHFETVAIPRLSGSTERTFKPDRSVTLQFDRPVGELSVLGDLAVAVEPAADRRSFRLAASNP TQGKRYPVQLAWSTTTGVPLPPLKLDLVAPPPLTVKANARGLDNLGPALPLQFTFSEPLLEREQASSHIAVQTDKGEAIA GKWRWVGSRRLRFTPAGGWPSVSTIRVSVGADGLAAVGGGYLEKPFDFSFTTGTDRHIYIYLDTQKVAAVENGRVVRTFR VSTGKAGTPTVTGNFYIYDRYAIKTMRSRADPGEPGHYVVENVPYAQFFHEGYAFHGAWWHNAFGTRVSHGCVNMATRRF NKRSGVSEDAGWLWKWAAMGVPVTVLAKTPARAAS
Sequences:
>Translated_435_residues MAAGLGFFAWWQVIPLGVGMVPTDGATEVDPREPVVIETIGLGSRLSEVQVRDNLGRSAAGESDGRRLTLKPPLAFGTRY TITARVEREWTQQAVSEVMHFETVAIPRLSGSTERTFKPDRSVTLQFDRPVGELSVLGDLAVAVEPAADRRSFRLAASNP TQGKRYPVQLAWSTTTGVPLPPLKLDLVAPPPLTVKANARGLDNLGPALPLQFTFSEPLLEREQASSHIAVQTDKGEAIA GKWRWVGSRRLRFTPAGGWPSVSTIRVSVGADGLAAVGGGYLEKPFDFSFTTGTDRHIYIYLDTQKVAAVENGRVVRTFR VSTGKAGTPTVTGNFYIYDRYAIKTMRSRADPGEPGHYVVENVPYAQFFHEGYAFHGAWWHNAFGTRVSHGCVNMATRRF NKRSGVSEDAGWLWKWAAMGVPVTVLAKTPARAAS >Mature_434_residues AAGLGFFAWWQVIPLGVGMVPTDGATEVDPREPVVIETIGLGSRLSEVQVRDNLGRSAAGESDGRRLTLKPPLAFGTRYT ITARVEREWTQQAVSEVMHFETVAIPRLSGSTERTFKPDRSVTLQFDRPVGELSVLGDLAVAVEPAADRRSFRLAASNPT QGKRYPVQLAWSTTTGVPLPPLKLDLVAPPPLTVKANARGLDNLGPALPLQFTFSEPLLEREQASSHIAVQTDKGEAIAG KWRWVGSRRLRFTPAGGWPSVSTIRVSVGADGLAAVGGGYLEKPFDFSFTTGTDRHIYIYLDTQKVAAVENGRVVRTFRV STGKAGTPTVTGNFYIYDRYAIKTMRSRADPGEPGHYVVENVPYAQFFHEGYAFHGAWWHNAFGTRVSHGCVNMATRRFN KRSGVSEDAGWLWKWAAMGVPVTVLAKTPARAAS
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47511; Mature: 47380
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAGLGFFAWWQVIPLGVGMVPTDGATEVDPREPVVIETIGLGSRLSEVQVRDNLGRSAA CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHEEEHHCCCCCCC GESDGRRLTLKPPLAFGTRYTITARVEREWTQQAVSEVMHFETVAIPRLSGSTERTFKPD CCCCCCEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC RSVTLQFDRPVGELSVLGDLAVAVEPAADRRSFRLAASNPTQGKRYPVQLAWSTTTGVPL CCEEEEECCCCCCHHHHEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCC PPLKLDLVAPPPLTVKANARGLDNLGPALPLQFTFSEPLLEREQASSHIAVQTDKGEAIA CCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHCCCEEEEEECCCCEEE GKWRWVGSRRLRFTPAGGWPSVSTIRVSVGADGLAAVGGGYLEKPFDFSFTTGTDRHIYI EEEEEECCCEEEEEECCCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCEEECCCCCEEEE YLDTQKVAAVENGRVVRTFRVSTGKAGTPTVTGNFYIYDRYAIKTMRSRADPGEPGHYVV EEECCEEEEECCCEEEEEEEEECCCCCCCEEECCEEEEEHHHHHHHHHCCCCCCCCCEEE ENVPYAQFFHEGYAFHGAWWHNAFGTRVSHGCVNMATRRFNKRSGVSEDAGWLWKWAAMG ECCCHHHHHHCCCEEECEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC VPVTVLAKTPARAAS CCEEEEECCCCCCCC >Mature Secondary Structure AAGLGFFAWWQVIPLGVGMVPTDGATEVDPREPVVIETIGLGSRLSEVQVRDNLGRSAA CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHEEEHHCCCCCCC GESDGRRLTLKPPLAFGTRYTITARVEREWTQQAVSEVMHFETVAIPRLSGSTERTFKPD CCCCCCEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC RSVTLQFDRPVGELSVLGDLAVAVEPAADRRSFRLAASNPTQGKRYPVQLAWSTTTGVPL CCEEEEECCCCCCHHHHEEEEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCC PPLKLDLVAPPPLTVKANARGLDNLGPALPLQFTFSEPLLEREQASSHIAVQTDKGEAIA CCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCHHHHHHCCCEEEEEECCCCEEE GKWRWVGSRRLRFTPAGGWPSVSTIRVSVGADGLAAVGGGYLEKPFDFSFTTGTDRHIYI EEEEEECCCEEEEEECCCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCEEECCCCCEEEE YLDTQKVAAVENGRVVRTFRVSTGKAGTPTVTGNFYIYDRYAIKTMRSRADPGEPGHYVV EEECCEEEEECCCEEEEEEEEECCCCCCCEEECCEEEEEHHHHHHHHHCCCCCCCCCEEE ENVPYAQFFHEGYAFHGAWWHNAFGTRVSHGCVNMATRRFNKRSGVSEDAGWLWKWAAMG ECCCHHHHHHCCCEEECEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC VPVTVLAKTPARAAS CCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA