| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is trxA [H]
Identifier: 37520449
GI number: 37520449
Start: 931248
End: 931580
Strand: Reverse
Name: trxA [H]
Synonym: gll0880
Alternate gene names: 37520449
Gene position: 931580-931248 (Counterclockwise)
Preceding gene: 37520450
Following gene: 37520448
Centisome position: 20.0
GC content: 56.76
Gene sequence:
>333_bases ATGTCAGCTGCAGTGCCGGTTGGTGATTCGAACTTCAAAACCGAAGTTCTCGACAGCGAATTGCCAGTGCTGGTTGATTT CTGGGCTCCCTGGTGCGGGCCGTGCCGCATGGTGGCGCCGGTGGTCGACGAGATTGCCCAGCAGTACAGTGGCAAGCTCA AGGTGGTCAAGGTCAACACCGACGAAAATCCCCAGGTGGCAAGCCAGTACGGCATCCGCAGCATTCCGACGCTGATGGTT TTTAAGTCCGGCTCCAAGGTGGATATGGTCGTCGGTGCCGTTCCGAAGACGACGCTGGCCACCACCCTCGAAAAGCATAT CGATATCAAATAG
Upstream 100 bases:
>100_bases GCGGTTTCTTTGTGCCGGGGCCTTGATCCCCGCCGTAGGCGCGGGCCGAAGGCCCATGGTACACTGAGGAAAAACCCTTG TATCAGGAGCACCATTAGAT
Downstream 100 bases:
>100_bases TGCAGGTGTGCTTTGACCTCGATTGCGGTTGATCCCCACAGCGAGTGGCAACTATCGACCGGGTCCACTTCCCGGGTCGG CGTCACCGATACCACCTTTC
Product: thioredoxin
Products: NA
Alternate protein names: Trx-1; Thioredoxin-M [H]
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSAAVPVGDSNFKTEVLDSELPVLVDFWAPWCGPCRMVAPVVDEIAQQYSGKLKVVKVNTDENPQVASQYGIRSIPTLMV FKSGSKVDMVVGAVPKTTLATTLEKHIDIK
Sequences:
>Translated_110_residues MSAAVPVGDSNFKTEVLDSELPVLVDFWAPWCGPCRMVAPVVDEIAQQYSGKLKVVKVNTDENPQVASQYGIRSIPTLMV FKSGSKVDMVVGAVPKTTLATTLEKHIDIK >Mature_109_residues SAAVPVGDSNFKTEVLDSELPVLVDFWAPWCGPCRMVAPVVDEIAQQYSGKLKVVKVNTDENPQVASQYGIRSIPTLMVF KSGSKVDMVVGAVPKTTLATTLEKHIDIK
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=97, Percent_Identity=36.0824742268041, Blast_Score=79, Evalue=1e-15, Organism=Homo sapiens, GI5031973, Length=109, Percent_Identity=35.7798165137615, Blast_Score=73, Evalue=5e-14, Organism=Homo sapiens, GI50592994, Length=82, Percent_Identity=37.8048780487805, Blast_Score=65, Evalue=1e-11, Organism=Homo sapiens, GI21361657, Length=107, Percent_Identity=29.9065420560748, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI87082331, Length=103, Percent_Identity=49.5145631067961, Blast_Score=119, Evalue=5e-29, Organism=Escherichia coli, GI1788936, Length=93, Percent_Identity=51.6129032258064, Blast_Score=117, Evalue=2e-28, Organism=Escherichia coli, GI87081747, Length=103, Percent_Identity=32.0388349514563, Blast_Score=72, Evalue=6e-15, Organism=Caenorhabditis elegans, GI212646193, Length=94, Percent_Identity=35.1063829787234, Blast_Score=78, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17510299, Length=101, Percent_Identity=38.6138613861386, Blast_Score=76, Evalue=3e-15, Organism=Caenorhabditis elegans, GI115532378, Length=72, Percent_Identity=41.6666666666667, Blast_Score=74, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17509965, Length=94, Percent_Identity=38.2978723404255, Blast_Score=73, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115532380, Length=72, Percent_Identity=41.6666666666667, Blast_Score=73, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17507705, Length=89, Percent_Identity=34.8314606741573, Blast_Score=73, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17544108, Length=72, Percent_Identity=41.6666666666667, Blast_Score=72, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71998175, Length=87, Percent_Identity=39.0804597701149, Blast_Score=71, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17556044, Length=104, Percent_Identity=32.6923076923077, Blast_Score=69, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17554386, Length=79, Percent_Identity=40.5063291139241, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71980562, Length=82, Percent_Identity=32.9268292682927, Blast_Score=66, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71980565, Length=82, Percent_Identity=32.9268292682927, Blast_Score=65, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17549970, Length=83, Percent_Identity=36.144578313253, Blast_Score=62, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6321648, Length=86, Percent_Identity=40.6976744186046, Blast_Score=77, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6323072, Length=86, Percent_Identity=40.6976744186046, Blast_Score=75, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6319925, Length=85, Percent_Identity=35.2941176470588, Blast_Score=65, Evalue=2e-12, Organism=Drosophila melanogaster, GI24639826, Length=91, Percent_Identity=42.8571428571429, Blast_Score=93, Evalue=3e-20, Organism=Drosophila melanogaster, GI24664269, Length=82, Percent_Identity=40.2439024390244, Blast_Score=76, Evalue=3e-15, Organism=Drosophila melanogaster, GI28573567, Length=97, Percent_Identity=32.9896907216495, Blast_Score=76, Evalue=5e-15, Organism=Drosophila melanogaster, GI17648013, Length=74, Percent_Identity=41.8918918918919, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI24583090, Length=74, Percent_Identity=41.8918918918919, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI17530795, Length=93, Percent_Identity=32.258064516129, Blast_Score=72, Evalue=1e-13, Organism=Drosophila melanogaster, GI17647799, Length=81, Percent_Identity=44.4444444444444, Blast_Score=71, Evalue=1e-13, Organism=Drosophila melanogaster, GI19921434, Length=77, Percent_Identity=37.6623376623377, Blast_Score=69, Evalue=7e-13, Organism=Drosophila melanogaster, GI24658597, Length=108, Percent_Identity=32.4074074074074, Blast_Score=66, Evalue=4e-12, Organism=Drosophila melanogaster, GI21358065, Length=83, Percent_Identity=36.144578313253, Blast_Score=66, Evalue=5e-12, Organism=Drosophila melanogaster, GI24664525, Length=73, Percent_Identity=36.986301369863, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 11934; Mature: 11803
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAVPVGDSNFKTEVLDSELPVLVDFWAPWCGPCRMVAPVVDEIAQQYSGKLKVVKVNT CCCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECC DENPQVASQYGIRSIPTLMVFKSGSKVDMVVGAVPKTTLATTLEKHIDIK CCCCHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC >Mature Secondary Structure SAAVPVGDSNFKTEVLDSELPVLVDFWAPWCGPCRMVAPVVDEIAQQYSGKLKVVKVNT CCCCCCCCCCCEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECC DENPQVASQYGIRSIPTLMVFKSGSKVDMVVGAVPKTTLATTLEKHIDIK CCCCHHHHHCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3096973; 3926769 [H]