Click here to switch to the map view.

The map label for this gene is 37520440

Identifier: 37520440

GI number: 37520440

Start: 919068

End: 919655

Strand: Direct

Name: 37520440

Synonym: glr0871

Alternate gene names: NA

Gene position: 919068-919655 (Clockwise)

Preceding gene: 37520439

Following gene: 37520441

Centisome position: 19.73

GC content: 55.61

Gene sequence:

>588_bases
ATGGTCAGCGTCCCCAGACGGATGTCCCCTGCCGAGTACATCGAGTGGGAGACCCACCAGCAAATCCGGCACGAGTACGT
GAATGGCGAAATTTTCGCTATGACGGGTAGCAGCATTGCCCACAACACGATCGCTGTCAATGTAGCCAGGTTGATTGGCA
ACTACCTGGAGGACTCGAGGAGTCCCTGCCGGGTCTTCGTCTCCGATGTCAAAGCCCAGATCACCGAGGACGGTCCGTTC
TATTACCCAGATGTGATGGCTACCTGTGACGAACGCGATCGCAATGCCGTCTACACCATTCGCCATCCCTGCTTGATTGT
CGAAGTGCTCTCTCCGACCACCGAGGCTTTCGATCGTGGCGACAAGTTCGGCGACTACCGGCGCATCGACACGTTGCAAG
AATACATGCTTTTCGATTCGCGCAAGCTTGCTGTGGAGCATTACCGCCGCGAGTCGGAGCGTACCTGGAAACTGGTGCTC
TACGCCGCTGAAGACACCATGCACCTGGAAAGCCTAGATTGCGAACTGGCGATTGCAAGGTGCTACAAAGACGTGATTTT
CGAGGACGCTCTATCGGCTCAACGTTAA

Upstream 100 bases:

>100_bases
TTGACAATCGCATCGGGTGTTTTGCTGTAAAGGGATCGGCTGCTCTACGATAGAGGCCAGAACGCTGCGAAAACCATTCC
TCTTTTACTGGAGCATCTCC

Downstream 100 bases:

>100_bases
GGGTTGACCGAGCATGGGCGAGAGCGTGACTACTTGTATTTTGTCACCCCTTTACGCAACACACAGATGACGATTCTTAC
GCCGTCTTGACAATTGCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MVSVPRRMSPAEYIEWETHQQIRHEYVNGEIFAMTGSSIAHNTIAVNVARLIGNYLEDSRSPCRVFVSDVKAQITEDGPF
YYPDVMATCDERDRNAVYTIRHPCLIVEVLSPTTEAFDRGDKFGDYRRIDTLQEYMLFDSRKLAVEHYRRESERTWKLVL
YAAEDTMHLESLDCELAIARCYKDVIFEDALSAQR

Sequences:

>Translated_195_residues
MVSVPRRMSPAEYIEWETHQQIRHEYVNGEIFAMTGSSIAHNTIAVNVARLIGNYLEDSRSPCRVFVSDVKAQITEDGPF
YYPDVMATCDERDRNAVYTIRHPCLIVEVLSPTTEAFDRGDKFGDYRRIDTLQEYMLFDSRKLAVEHYRRESERTWKLVL
YAAEDTMHLESLDCELAIARCYKDVIFEDALSAQR
>Mature_195_residues
MVSVPRRMSPAEYIEWETHQQIRHEYVNGEIFAMTGSSIAHNTIAVNVARLIGNYLEDSRSPCRVFVSDVKAQITEDGPF
YYPDVMATCDERDRNAVYTIRHPCLIVEVLSPTTEAFDRGDKFGDYRRIDTLQEYMLFDSRKLAVEHYRRESERTWKLVL
YAAEDTMHLESLDCELAIARCYKDVIFEDALSAQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll1609 and slr1290 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008538
- InterPro:   IPR012296
- InterPro:   IPR011335 [H]

Pfam domain/function: PF05685 DUF820 [H]

EC number: NA

Molecular weight: Translated: 22688; Mature: 22688

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSVPRRMSPAEYIEWETHQQIRHEYVNGEIFAMTGSSIAHNTIAVNVARLIGNYLEDSR
CCCCCCCCCCHHHHCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC
SPCRVFVSDVKAQITEDGPFYYPDVMATCDERDRNAVYTIRHPCLIVEVLSPTTEAFDRG
CHHHHHHHHHHHHCCCCCCEECCHHHHHCCCCCCCCEEEEECCEEEEEECCCCHHHHHCC
DKFGDYRRIDTLQEYMLFDSRKLAVEHYRRESERTWKLVLYAAEDTMHLESLDCELAIAR
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEECCCCEEHHHCCHHHHHHH
CYKDVIFEDALSAQR
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSVPRRMSPAEYIEWETHQQIRHEYVNGEIFAMTGSSIAHNTIAVNVARLIGNYLEDSR
CCCCCCCCCCHHHHCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC
SPCRVFVSDVKAQITEDGPFYYPDVMATCDERDRNAVYTIRHPCLIVEVLSPTTEAFDRG
CHHHHHHHHHHHHCCCCCCEECCHHHHHCCCCCCCCEEEEECCEEEEEECCCCHHHHHCC
DKFGDYRRIDTLQEYMLFDSRKLAVEHYRRESERTWKLVLYAAEDTMHLESLDCELAIAR
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEEEECCCCEEHHHCCHHHHHHH
CYKDVIFEDALSAQR
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]