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The map label for this gene is chlD [H]

Identifier: 37520439

GI number: 37520439

Start: 916653

End: 918662

Strand: Direct

Name: chlD [H]

Synonym: gvip115

Alternate gene names: 37520439

Gene position: 916653-918662 (Clockwise)

Preceding gene: 37520438

Following gene: 37520440

Centisome position: 19.67

GC content: 66.72

Gene sequence:

>2010_bases
ATGACTGCCTCTGTGCCCCTTGCCTTTCCGATCACCGCCGTCGTCGCCCAGGAGGCGATCAAGCTCGCCCTGCTGCTCGC
GGTCACCGATCCGGGGCTGGGGGGGGTGGCCATCAGCGGTCGGCGCGGCACGGCCAAATCGGTGATGGCCCGGGGCATCC
ACGCCCTGCTGCCGCCCATCGAAGTGATCGCCGGTTGCCCAGCAAACGACGATCCCGACTGGCCCGAATCCTGGTGTGAC
CAGTGCCGCCGCCTCTATGCCCAGCAGACTCCCCAACGGGCGATGCGGCCGGTGCCTTTTGTGCAGGTGCCGCTCGGGGC
TACCGAGGACCGGGTGATCGGCACCGTCGATCTCGAAAAATCGATGCGCCTGGGCGAACCGGTCTTTCAGCCGGGGCTGC
TCGCCGAGGCGAACCGGGGTATCCTCTACATCGATGAGATCAACCTGCTCGACAACCAGATCGCCAATTTATTGCTGACA
ACCCTCAGCGAAGGCATCAACCGCGTCGAGCGTGAGGGCCTCAGCTTTGAGCATGCCTGCGCGATGGTGTTGCTCGCCAC
GTTCAACCCTGAAGAGGGCGAACTGCGCGAACACCTGCTCGACCGCATCGCCATCTGCCTGCCCGCCGAGGCGCAGTTGA
GCCTGGAGGAGCGTCTCGAAGTGGTGGACCAGGCGCGCGGGTACGCCCGCGATCCGGCGGCGTTTGTGGCCGCTCACCGC
GGCGAGATCGAAGAATTGCAGACGCAGATTGTGCTTGCCCGCCAGCGTCTCGCGGAAGTGAGCATCGAAGCTGAGCAGAT
TGCCTACCTGGTCGAAGAAGCCGTGCGCGGCGAGGTAGAGGGCCACCGGGCGGAACTGTTTGCCCTCCGGGCGGCGAAGG
TGCATTGCGCCCTCGATGGGCGCACCCGCGTCAACGCCGAGGACTTGCGCCGGGCGGTCGAGCTGGTGATTATTCCGCGC
TCGACGGTGATCCCCTCGGAGGAGCCCCCACCGCCGCCACCCCCACCGCCACCGCCTCCCACCGACGAGCAGGAGCAGGA
CGAGGACGAGCAGCAGGACGACGACCCCGAGGAAAACGACACTGACGAGCAGGAGGAGCAGGAAGCGCCCCCGAGCCTAC
CCGAGGATTTTGTCTTCGACGCCGAGGGGGTCATTCTCGATCCGAGGCTATTGGCCTTTGCCCAGACGGTGCGGCGCAAG
AGCAAATCCGGGGCGCGCACCAAGATTTATTCCGACTCGCGCGGCCGTTACGTCAAGCCGATCCTGCCCCGGGGCCGGGT
GAACCGCATCGCTGTAGATGCCACCCTGCGCGCCGCCGCCCCGCACCAGAAAGCCCGCCGCGAGCGCGAACCGGGTAGAC
GGGTGATTGTCGAAGCGGGCGATGTGCGCGCCAAGCGCCTGGCGCGCAAGGCCGGGGCGCTCATCACCTTTGTGGTCGAC
GCCAGCGGCTCGATGGCCCTCAACCGGATGCGCTCAGCCAAAGGTGCCGTGTTGAAACTGCTCACCGAGGCCTATCAAAA
CCGCGACAAGGTGGCACTCGTTCCCTTTCGCGGCGAAAAAGCGGACGTGCTGCTGCCGCCCACCCGCTCGATCGCCCAGG
CCCGCAGGCGCCTGGAATCATTGCCTTGCGGTGGCGGTTCGCCCTTGGCCCACGCCCTCAGCCAGGCGATCCGCCTGGGG
GTGAACGCCCAGAGCGCGGGCGATGTCGGCCAGGTGATTATCGTGGCGATTACCGACGGCCGGGGCAACATACCCCTCGC
CCGCTCGCTGGGCGAACCGCCGGGGGACGACAAACCCGACATCAAGGGTGAACTGCTCGCCCTCGCGGGCCGCATCCGTA
CCCTGGGTTTCAAGTTGCTGGTCATCGACACCGAGAACCGCTTCGTCTCCACCGGTTTTGCCAAAGAACTGACCACCCAG
GCGGGCGGGCGCTACTTTTATCTGCCCCGCGCCAGCGAGCAGACCCTGGCGCGGGCCACCCAGGACGCGATTGCCGAACT
GCGCGACTGA

Upstream 100 bases:

>100_bases
GCGATGCCGTCGAGTGGGTGGAGCCGCGGGAACTGGATGGCTACACGTTTCCGGTGGCGAACGCCCCGCTTATCCCGCTG
ATTCAGCAGCGCCTTTGCCC

Downstream 100 bases:

>100_bases
GACCGCTCAGAAAAGTCCCACAGAAGCTTTTCGCCGCCACTGTGGGACATGGTATTACGCTGCATTTTGGGAGTAAACAA
CCACCAGCAACATGACTGGA

Product: Mg chelatase subunit

Products: NA

Alternate protein names: Mg-chelatase subunit D; Mg-protoporphyrin IX chelatase [H]

Number of amino acids: Translated: 669; Mature: 668

Protein sequence:

>669_residues
MTASVPLAFPITAVVAQEAIKLALLLAVTDPGLGGVAISGRRGTAKSVMARGIHALLPPIEVIAGCPANDDPDWPESWCD
QCRRLYAQQTPQRAMRPVPFVQVPLGATEDRVIGTVDLEKSMRLGEPVFQPGLLAEANRGILYIDEINLLDNQIANLLLT
TLSEGINRVEREGLSFEHACAMVLLATFNPEEGELREHLLDRIAICLPAEAQLSLEERLEVVDQARGYARDPAAFVAAHR
GEIEELQTQIVLARQRLAEVSIEAEQIAYLVEEAVRGEVEGHRAELFALRAAKVHCALDGRTRVNAEDLRRAVELVIIPR
STVIPSEEPPPPPPPPPPPPTDEQEQDEDEQQDDDPEENDTDEQEEQEAPPSLPEDFVFDAEGVILDPRLLAFAQTVRRK
SKSGARTKIYSDSRGRYVKPILPRGRVNRIAVDATLRAAAPHQKARREREPGRRVIVEAGDVRAKRLARKAGALITFVVD
ASGSMALNRMRSAKGAVLKLLTEAYQNRDKVALVPFRGEKADVLLPPTRSIAQARRRLESLPCGGGSPLAHALSQAIRLG
VNAQSAGDVGQVIIVAITDGRGNIPLARSLGEPPGDDKPDIKGELLALAGRIRTLGFKLLVIDTENRFVSTGFAKELTTQ
AGGRYFYLPRASEQTLARATQDAIAELRD

Sequences:

>Translated_669_residues
MTASVPLAFPITAVVAQEAIKLALLLAVTDPGLGGVAISGRRGTAKSVMARGIHALLPPIEVIAGCPANDDPDWPESWCD
QCRRLYAQQTPQRAMRPVPFVQVPLGATEDRVIGTVDLEKSMRLGEPVFQPGLLAEANRGILYIDEINLLDNQIANLLLT
TLSEGINRVEREGLSFEHACAMVLLATFNPEEGELREHLLDRIAICLPAEAQLSLEERLEVVDQARGYARDPAAFVAAHR
GEIEELQTQIVLARQRLAEVSIEAEQIAYLVEEAVRGEVEGHRAELFALRAAKVHCALDGRTRVNAEDLRRAVELVIIPR
STVIPSEEPPPPPPPPPPPPTDEQEQDEDEQQDDDPEENDTDEQEEQEAPPSLPEDFVFDAEGVILDPRLLAFAQTVRRK
SKSGARTKIYSDSRGRYVKPILPRGRVNRIAVDATLRAAAPHQKARREREPGRRVIVEAGDVRAKRLARKAGALITFVVD
ASGSMALNRMRSAKGAVLKLLTEAYQNRDKVALVPFRGEKADVLLPPTRSIAQARRRLESLPCGGGSPLAHALSQAIRLG
VNAQSAGDVGQVIIVAITDGRGNIPLARSLGEPPGDDKPDIKGELLALAGRIRTLGFKLLVIDTENRFVSTGFAKELTTQ
AGGRYFYLPRASEQTLARATQDAIAELRD
>Mature_668_residues
TASVPLAFPITAVVAQEAIKLALLLAVTDPGLGGVAISGRRGTAKSVMARGIHALLPPIEVIAGCPANDDPDWPESWCDQ
CRRLYAQQTPQRAMRPVPFVQVPLGATEDRVIGTVDLEKSMRLGEPVFQPGLLAEANRGILYIDEINLLDNQIANLLLTT
LSEGINRVEREGLSFEHACAMVLLATFNPEEGELREHLLDRIAICLPAEAQLSLEERLEVVDQARGYARDPAAFVAAHRG
EIEELQTQIVLARQRLAEVSIEAEQIAYLVEEAVRGEVEGHRAELFALRAAKVHCALDGRTRVNAEDLRRAVELVIIPRS
TVIPSEEPPPPPPPPPPPPTDEQEQDEDEQQDDDPEENDTDEQEEQEAPPSLPEDFVFDAEGVILDPRLLAFAQTVRRKS
KSGARTKIYSDSRGRYVKPILPRGRVNRIAVDATLRAAAPHQKARREREPGRRVIVEAGDVRAKRLARKAGALITFVVDA
SGSMALNRMRSAKGAVLKLLTEAYQNRDKVALVPFRGEKADVLLPPTRSIAQARRRLESLPCGGGSPLAHALSQAIRLGV
NAQSAGDVGQVIIVAITDGRGNIPLARSLGEPPGDDKPDIKGELLALAGRIRTLGFKLLVIDTENRFVSTGFAKELTTQA
GGRYFYLPRASEQTLARATQDAIAELRD

Specific function: Involved in chlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX [H]

COG id: COG1240

COG function: function code H; Mg-chelatase subunit ChlD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR011776
- InterPro:   IPR000523
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01078 Mg_chelatase; PF00092 VWA [H]

EC number: =6.6.1.1 [H]

Molecular weight: Translated: 72971; Mature: 72840

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASVPLAFPITAVVAQEAIKLALLLAVTDPGLGGVAISGRRGTAKSVMARGIHALLPPI
CCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHCCHH
EVIAGCPANDDPDWPESWCDQCRRLYAQQTPQRAMRPVPFVQVPLGATEDRVIGTVDLEK
HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCCCCCEEEEEEHHH
SMRLGEPVFQPGLLAEANRGILYIDEINLLDNQIANLLLTTLSEGINRVEREGLSFEHAC
HHHCCCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AMVLLATFNPEEGELREHLLDRIAICLPAEAQLSLEERLEVVDQARGYARDPAAFVAAHR
HHHHHEECCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHC
GEIEELQTQIVLARQRLAEVSIEAEQIAYLVEEAVRGEVEGHRAELFALRAAKVHCALDG
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHEEEEEEEEEEEECC
RTRVNAEDLRRAVELVIIPRSTVIPSEEPPPPPPPPPPPPTDEQEQDEDEQQDDDPEEND
CCCCCHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
TDEQEEQEAPPSLPEDFVFDAEGVILDPRLLAFAQTVRRKSKSGARTKIYSDSRGRYVKP
CCCHHHHCCCCCCCHHHEECCCCCEECHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECC
ILPRGRVNRIAVDATLRAAAPHQKARREREPGRRVIVEAGDVRAKRLARKAGALITFVVD
CCCCCCCCEEEEEHHHHHCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEEE
ASGSMALNRMRSAKGAVLKLLTEAYQNRDKVALVPFRGEKADVLLPPTRSIAQARRRLES
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHH
LPCGGGSPLAHALSQAIRLGVNAQSAGDVGQVIIVAITDGRGNIPLARSLGEPPGDDKPD
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHCCCCCCCCCCC
IKGELLALAGRIRTLGFKLLVIDTENRFVSTGFAKELTTQAGGRYFYLPRASEQTLARAT
CHHHHHHHHHHHHHCCEEEEEEECCCCEEECCHHHHHHHHCCCEEEEECCCCHHHHHHHH
QDAIAELRD
HHHHHHHCC
>Mature Secondary Structure 
TASVPLAFPITAVVAQEAIKLALLLAVTDPGLGGVAISGRRGTAKSVMARGIHALLPPI
CCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHCCHH
EVIAGCPANDDPDWPESWCDQCRRLYAQQTPQRAMRPVPFVQVPLGATEDRVIGTVDLEK
HHHCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCCCCCEEEEEEHHH
SMRLGEPVFQPGLLAEANRGILYIDEINLLDNQIANLLLTTLSEGINRVEREGLSFEHAC
HHHCCCCCCCCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AMVLLATFNPEEGELREHLLDRIAICLPAEAQLSLEERLEVVDQARGYARDPAAFVAAHR
HHHHHEECCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHC
GEIEELQTQIVLARQRLAEVSIEAEQIAYLVEEAVRGEVEGHRAELFALRAAKVHCALDG
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHEEEEEEEEEEEECC
RTRVNAEDLRRAVELVIIPRSTVIPSEEPPPPPPPPPPPPTDEQEQDEDEQQDDDPEEND
CCCCCHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
TDEQEEQEAPPSLPEDFVFDAEGVILDPRLLAFAQTVRRKSKSGARTKIYSDSRGRYVKP
CCCHHHHCCCCCCCHHHEECCCCCEECHHHHHHHHHHHHHHCCCCCEEEEECCCCCEECC
ILPRGRVNRIAVDATLRAAAPHQKARREREPGRRVIVEAGDVRAKRLARKAGALITFVVD
CCCCCCCCEEEEEHHHHHCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEEEE
ASGSMALNRMRSAKGAVLKLLTEAYQNRDKVALVPFRGEKADVLLPPTRSIAQARRRLES
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEECCCCHHHHHHHHHHHH
LPCGGGSPLAHALSQAIRLGVNAQSAGDVGQVIIVAITDGRGNIPLARSLGEPPGDDKPD
CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCHHHHCCCCCCCCCCC
IKGELLALAGRIRTLGFKLLVIDTENRFVSTGFAKELTTQAGGRYFYLPRASEQTLARAT
CHHHHHHHHHHHHHCCEEEEEEECCCCEEECCHHHHHHHHCCCEEEEECCCCHHHHHHHH
QDAIAELRD
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8663186; 8905231 [H]