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The map label for this gene is xylB [H]

Identifier: 37520350

GI number: 37520350

Start: 833843

End: 835231

Strand: Reverse

Name: xylB [H]

Synonym: gll0781

Alternate gene names: 37520350

Gene position: 835231-833843 (Counterclockwise)

Preceding gene: 37520356

Following gene: 37520347

Centisome position: 17.93

GC content: 66.74

Gene sequence:

>1389_bases
ATGGTAGTTCTCGGGTCATCGGCACACTTCCATGCTACCGCACCTGGGTTGTTCGTCGGGATCGACCTGGGTACCTCGGG
TTTGAGGCTGGTTGCCGTCGACGGAAGTGGCCTGGCTGTCGCCACGGCTTCGCAAACCTGGCCGGTGGCCGCGAGTGAAC
AAGATCCCGCCCAATGGCTCGCCTCGCTCGAAAAGTTGTGGAAGCCGTTGATCAGGGAATTACCCGGGCCGGTACTGGCC
GTCAGCGCCACGAGCACCTCCGGAACGGTCCTGCCCACGGACTGCAAAGGCCGCCCCATCGCCTCCGCCTGGCTCTACAG
CGACCGGCGGGGCTCAGAGCTGGGGGCGCGCTTCGGCATCCCGGCCGGTTGGGGCCTCAGCCGCTGGCTGTGGTGGCAAT
TGCAGGGGAGCACAGATTGCCGGCTTACCCATCCAAGCGATTACTTGCTGACGGCTCTCGGGGCCAAAGTGGGTTGGACG
GACCACACCTGCGCGCTTAAAAGCGGCTACGATCCCGCGGCAGGAAAGTGGAGCCTGGCACTGGCGGCCGGTGTTCCGGC
CGCACAGTTGCCCGCGGTCGTGCGGCCCGGCACGGTGGTGGGCACCCTCGCCCCCGAATGGGGTCTGGGGAGCGGCGTGA
AGCTGGTGGCCGGTTGCACCGACGGCGTGGCGGGACAGATCGCAAGCGGCGCCCTCGCCGTCGGGCAGGTCTGCCTCAGC
CTCGGGAGCACGCTCATTTTCAAGGGAGTCAGCGAAGCGAAGATTGCCAGTGCGGACGGTGCTGTCTACAGTCACCTCCA
TCCCGATGGGCGCTTGTGGCTGCCCGGGGCCGCCTCCGCCTGCGGTGGGGCGATTCTGGAAAAGTTCTATCCCCGGGAGC
AATGGGAAGAGTTGAACGGGTGTGCGGAAGCTTTGAACCGCCCCACCGGCCAGACCGCTTATCCTCTGGCCACACCGGGC
GAGCGTTTTCCGCGCTCGGGTGCCGATTTTGCCGGGGGATTACCGGATGTTCCAACCGAAGATCCGCACTTTTACGCCGG
ACTGCTCGAAGGAGTGGCTTTTGTCGAGCGCCTGGGGCTTGAGCGTCTGATGGCTCTGGGTATGCCGGTCCAGGGGGCTT
TACTGTGCGTGGGGGGCGGTACCCACAGCGAAGTCTGGCTACGCATTCGCGCCGCCGTCCTGGGCCGGGAGCTGCAACTG
CCTGCCCAGGTGCAGCCCGCTCTCGGAGCGGCAATCCTGGCTGCCGCCGGTGTCTGGGGGGTGGGTGTCGCCCAGGCTGC
GGCCCGAATGGTGCGCCTGGATCGGCAGATCCTGCCGGACGCAGCCCTGGCTGCTGCCTACGAAGCTGTCTATCGCCGGT
TTCTGGAGCGCTGGGGCGGGGCCGGCTAA

Upstream 100 bases:

>100_bases
GTCGAACTTGCCGTAGTTGCTGCCGACCTGCATCAGCTCCTGGTACTCCTGATAGAATTCTCGAGCCTCTTGTTGGACGA
TCTCAGAATCGAAAAATCCC

Downstream 100 bases:

>100_bases
ACCGCCTTGATGCTGGAGAGGATTTGCTGAACCACCGGCGCCGCCGCCTTGGTGGCGTCATCGTTCACAGTCGTGATCAC
GAAGAACACCCGGTTGGCCG

Product: FGGY family sugar kinase

Products: ADP; H+; D-Xylulose 5-phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MVVLGSSAHFHATAPGLFVGIDLGTSGLRLVAVDGSGLAVATASQTWPVAASEQDPAQWLASLEKLWKPLIRELPGPVLA
VSATSTSGTVLPTDCKGRPIASAWLYSDRRGSELGARFGIPAGWGLSRWLWWQLQGSTDCRLTHPSDYLLTALGAKVGWT
DHTCALKSGYDPAAGKWSLALAAGVPAAQLPAVVRPGTVVGTLAPEWGLGSGVKLVAGCTDGVAGQIASGALAVGQVCLS
LGSTLIFKGVSEAKIASADGAVYSHLHPDGRLWLPGAASACGGAILEKFYPREQWEELNGCAEALNRPTGQTAYPLATPG
ERFPRSGADFAGGLPDVPTEDPHFYAGLLEGVAFVERLGLERLMALGMPVQGALLCVGGGTHSEVWLRIRAAVLGRELQL
PAQVQPALGAAILAAAGVWGVGVAQAAARMVRLDRQILPDAALAAAYEAVYRRFLERWGGAG

Sequences:

>Translated_462_residues
MVVLGSSAHFHATAPGLFVGIDLGTSGLRLVAVDGSGLAVATASQTWPVAASEQDPAQWLASLEKLWKPLIRELPGPVLA
VSATSTSGTVLPTDCKGRPIASAWLYSDRRGSELGARFGIPAGWGLSRWLWWQLQGSTDCRLTHPSDYLLTALGAKVGWT
DHTCALKSGYDPAAGKWSLALAAGVPAAQLPAVVRPGTVVGTLAPEWGLGSGVKLVAGCTDGVAGQIASGALAVGQVCLS
LGSTLIFKGVSEAKIASADGAVYSHLHPDGRLWLPGAASACGGAILEKFYPREQWEELNGCAEALNRPTGQTAYPLATPG
ERFPRSGADFAGGLPDVPTEDPHFYAGLLEGVAFVERLGLERLMALGMPVQGALLCVGGGTHSEVWLRIRAAVLGRELQL
PAQVQPALGAAILAAAGVWGVGVAQAAARMVRLDRQILPDAALAAAYEAVYRRFLERWGGAG
>Mature_462_residues
MVVLGSSAHFHATAPGLFVGIDLGTSGLRLVAVDGSGLAVATASQTWPVAASEQDPAQWLASLEKLWKPLIRELPGPVLA
VSATSTSGTVLPTDCKGRPIASAWLYSDRRGSELGARFGIPAGWGLSRWLWWQLQGSTDCRLTHPSDYLLTALGAKVGWT
DHTCALKSGYDPAAGKWSLALAAGVPAAQLPAVVRPGTVVGTLAPEWGLGSGVKLVAGCTDGVAGQIASGALAVGQVCLS
LGSTLIFKGVSEAKIASADGAVYSHLHPDGRLWLPGAASACGGAILEKFYPREQWEELNGCAEALNRPTGQTAYPLATPG
ERFPRSGADFAGGLPDVPTEDPHFYAGLLEGVAFVERLGLERLMALGMPVQGALLCVGGGTHSEVWLRIRAAVLGRELQL
PAQVQPALGAAILAAAGVWGVGVAQAAARMVRLDRQILPDAALAAAYEAVYRRFLERWGGAG

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Escherichia coli, GI1789987, Length=484, Percent_Identity=26.0330578512397, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1790005, Length=484, Percent_Identity=23.7603305785124, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: 2.7.1.17 [C]

Molecular weight: Translated: 47898; Mature: 47898

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVLGSSAHFHATAPGLFVGIDLGTSGLRLVAVDGSGLAVATASQTWPVAASEQDPAQWL
CEEECCCCCEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHH
ASLEKLWKPLIRELPGPVLAVSATSTSGTVLPTDCKGRPIASAWLYSDRRGSELGARFGI
HHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCHHHHEECCCCCCCCCHHCCC
PAGWGLSRWLWWQLQGSTDCRLTHPSDYLLTALGAKVGWTDHTCALKSGYDPAAGKWSLA
CCCCCCCEEEEEEECCCCCEEEECCCHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEEE
LAAGVPAAQLPAVVRPGTVVGTLAPEWGLGSGVKLVAGCTDGVAGQIASGALAVGQVCLS
EECCCCHHHCCCEECCCEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
LGSTLIFKGVSEAKIASADGAVYSHLHPDGRLWLPGAASACGGAILEKFYPREQWEELNG
HCCHHHHCCCCHHHEECCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHH
CAEALNRPTGQTAYPLATPGERFPRSGADFAGGLPDVPTEDPHFYAGLLEGVAFVERLGL
HHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ERLMALGMPVQGALLCVGGGTHSEVWLRIRAAVLGRELQLPAQVQPALGAAILAAAGVWG
HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHH
VGVAQAAARMVRLDRQILPDAALAAAYEAVYRRFLERWGGAG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVVLGSSAHFHATAPGLFVGIDLGTSGLRLVAVDGSGLAVATASQTWPVAASEQDPAQWL
CEEECCCCCEEECCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHH
ASLEKLWKPLIRELPGPVLAVSATSTSGTVLPTDCKGRPIASAWLYSDRRGSELGARFGI
HHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCHHHHEECCCCCCCCCHHCCC
PAGWGLSRWLWWQLQGSTDCRLTHPSDYLLTALGAKVGWTDHTCALKSGYDPAAGKWSLA
CCCCCCCEEEEEEECCCCCEEEECCCHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEEE
LAAGVPAAQLPAVVRPGTVVGTLAPEWGLGSGVKLVAGCTDGVAGQIASGALAVGQVCLS
EECCCCHHHCCCEECCCEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
LGSTLIFKGVSEAKIASADGAVYSHLHPDGRLWLPGAASACGGAILEKFYPREQWEELNG
HCCHHHHCCCCHHHEECCCCCEEEEECCCCCEECCCCCHHHHHHHHHHHCCHHHHHHHHH
CAEALNRPTGQTAYPLATPGERFPRSGADFAGGLPDVPTEDPHFYAGLLEGVAFVERLGL
HHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ERLMALGMPVQGALLCVGGGTHSEVWLRIRAAVLGRELQLPAQVQPALGAAILAAAGVWG
HHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHH
VGVAQAAARMVRLDRQILPDAALAAAYEAVYRRFLERWGGAG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-Xylulose [C]

Specific reaction: ATP + D-Xylulose --> ADP + H+ + D-Xylulose 5-phosphate [C]

General reaction: Phospho group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA