| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is ybeB [C]
Identifier: 37520356
GI number: 37520356
Start: 839684
End: 839965
Strand: Reverse
Name: ybeB [C]
Synonym: gsl0787
Alternate gene names: 37520356
Gene position: 839965-839684 (Counterclockwise)
Preceding gene: 37520357
Following gene: 37520350
Centisome position: 18.03
GC content: 62.77
Gene sequence:
>282_bases GTGACCATCCTTGCGGATTATTTTGTGATTGCCACCGGCAACTCCCGCGCCCAAGTGCGCGCCATCGGCAACGCCGTCGA AGAAAAAATCAAAACCGAGTTCGCCCGCAAGCCCGTGCGCATCGAAGGGCTTGGGGAGGGCAGCTGGGTGCTCGCCGACT ACGGCGATGTGATCGTGCATGTCCTGCTGCGCTCCGAGCGCGAATTTTATCAGCTCGAAGCTTTCTGGGGCCACGCCCCG CGCGTCGATGTGGCGCTCCCCCCGGCCCCCCTCAAACCTTGA
Upstream 100 bases:
>100_bases AACGTTGATCGATCAAAGCGCCCTGCCGCTGGCTCTAGCTGCCGTCCAGGCTGCCGACGACAGAAAAGGCGAAGATATCG TCGTTCTGGAAGTAGGCCAG
Downstream 100 bases:
>100_bases GGGGGCCGACGGGGGAATCTACCTGGGCACAATCAGGCCGTAGCCGCCGTGGTTGCGCGCGTAGAGCACATTGATTTCAC CGCTCTCGGCGTTGCGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Iojap-Related Protein; Iojap Family Protein; Iojap Protein; Iojap Superfamily Protein; PolyA Polymerase Iojap Protein; Iojap-Like Family Protein; Iojap Like Protein; Plant Iojap-Like Protein; Conserved Protein Iojap Family; Iojap Protein -Like Protein; Development Gene IojAP Superfamily Protein; YqeL Protein; Iojap Protein Family; Poly(A) Polymerase PcnB; Iojap-Like Protein Protein
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MTILADYFVIATGNSRAQVRAIGNAVEEKIKTEFARKPVRIEGLGEGSWVLADYGDVIVHVLLRSEREFYQLEAFWGHAP RVDVALPPAPLKP
Sequences:
>Translated_93_residues MTILADYFVIATGNSRAQVRAIGNAVEEKIKTEFARKPVRIEGLGEGSWVLADYGDVIVHVLLRSEREFYQLEAFWGHAP RVDVALPPAPLKP >Mature_92_residues TILADYFVIATGNSRAQVRAIGNAVEEKIKTEFARKPVRIEGLGEGSWVLADYGDVIVHVLLRSEREFYQLEAFWGHAPR VDVALPPAPLKP
Specific function: Unknown
COG id: COG0799
COG function: function code S; Uncharacterized homolog of plant Iojap protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10362; Mature: 10231
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILADYFVIATGNSRAQVRAIGNAVEEKIKTEFARKPVRIEGLGEGSWVLADYGDVIVH CEEEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECHHHHHHH VLLRSEREFYQLEAFWGHAPRVDVALPPAPLKP HHHHCCCHHEEEEEECCCCCEEEEECCCCCCCC >Mature Secondary Structure TILADYFVIATGNSRAQVRAIGNAVEEKIKTEFARKPVRIEGLGEGSWVLADYGDVIVH EEEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECHHHHHHH VLLRSEREFYQLEAFWGHAPRVDVALPPAPLKP HHHHCCCHHEEEEEECCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA