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The map label for this gene is clpS

Identifier: 37520315

GI number: 37520315

Start: 797909

End: 798190

Strand: Reverse

Name: clpS

Synonym: gsl0746

Alternate gene names: 37520315

Gene position: 798190-797909 (Counterclockwise)

Preceding gene: 37520321

Following gene: 37520310

Centisome position: 17.13

GC content: 52.84

Gene sequence:

>282_bases
ATGAGCACCGAGACCCTTGAGAGGAAAAGTGTACAGCGCAAACCCATGCCGCTGTACAAAGTTCTGCTGCACAACGACGA
TCACACGCCGATGAACTATGTGATCGAGGTGTTGATGAAGACCATTCCAAAGATGCAGCCTTCCAAGGCGCGCAAGATCA
TGCTCGAAGCCCACAATGGCGGGGTGGCGGTGGTGATTGTCTGTGCCCTTGAACACGCCGAATTTTATAGCGAAAGCCTC
AACCGCCACAACTTGACTAGCACCTACGAACCGGACTGCTAA

Upstream 100 bases:

>100_bases
TCCAATTGCTCGGCCAGTGGATATATTTAGTATTGCCAACGCCTCTACCGGCAGGCAGAATAAGTAGCTGAGTATTTTTG
CGCATCCACCCGAATTTTTT

Downstream 100 bases:

>100_bases
GCCGGGGCAAGCACCCGGGTAAGTACCCGAGCGTTGGCGCGTGCTCTCTGCACCCAGCTTTGGCGCGCCTCGGCATTGAG
ACCGCTGCCCTGCCTGTAGG

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MSTETLERKSVQRKPMPLYKVLLHNDDHTPMNYVIEVLMKTIPKMQPSKARKIMLEAHNGGVAVVIVCALEHAEFYSESL
NRHNLTSTYEPDC

Sequences:

>Translated_93_residues
MSTETLERKSVQRKPMPLYKVLLHNDDHTPMNYVIEVLMKTIPKMQPSKARKIMLEAHNGGVAVVIVCALEHAEFYSESL
NRHNLTSTYEPDC
>Mature_92_residues
STETLERKSVQRKPMPLYKVLLHNDDHTPMNYVIEVLMKTIPKMQPSKARKIMLEAHNGGVAVVIVCALEHAEFYSESLN
RHNLTSTYEPDC

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CLPS_GLOVI (Q7NML9)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_923692.1
- ProteinModelPortal:   Q7NML9
- SMR:   Q7NML9
- GeneID:   2599365
- GenomeReviews:   BA000045_GR
- KEGG:   gvi:gsl0746
- NMPDR:   fig|251221.1.peg.746
- HOGENOM:   HBG644923
- OMA:   TCALEHA
- ProtClustDB:   PRK00033
- BioCyc:   GVIO251221:GSL0746-MONOMER
- HAMAP:   MF_00302
- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719
- Gene3D:   G3DSA:3.30.1390.10

Pfam domain/function: PF02617 ClpS; SSF54736 Ribosomal_L7/12_C/ClpS-like

EC number: NA

Molecular weight: Translated: 10670; Mature: 10538

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTETLERKSVQRKPMPLYKVLLHNDDHTPMNYVIEVLMKTIPKMQPSKARKIMLEAHNG
CCCCHHHHHHHCCCCCHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCHHEEEEEECCC
GVAVVIVCALEHAEFYSESLNRHNLTSTYEPDC
CEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
STETLERKSVQRKPMPLYKVLLHNDDHTPMNYVIEVLMKTIPKMQPSKARKIMLEAHNG
CCCHHHHHHHCCCCCHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCHHEEEEEECCC
GVAVVIVCALEHAEFYSESLNRHNLTSTYEPDC
CEEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292