| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is yceF [H]
Identifier: 37520196
GI number: 37520196
Start: 669982
End: 670764
Strand: Reverse
Name: yceF [H]
Synonym: gll0627
Alternate gene names: 37520196
Gene position: 670764-669982 (Counterclockwise)
Preceding gene: 37520201
Following gene: 37520194
Centisome position: 14.4
GC content: 57.47
Gene sequence:
>783_bases ATGTGGGAATTCCTCTACGACCACCTGGGCTTTGATCTCGGAGTTGAGCCTTGGGATTTTGCCATTATCTTTGCCCTGGT TTTCGTGGAAGGTGCTCTCAGTGCGGACAACGCCGCGGTGCTCGCCGCCCTCACCCGCACCCTGCCCACCGACGAAGAAC GCCGTCGCTCGCTGCGCTACGGGATCATCGGCGCCTTTGTCTTTCGTTTTTTTGCAGTACTGTTCGCAGCCTGGCTGATC GACAACTGGCCGCTCAAGTTGGCTGGTGCCCTGTATTTGATTTATCTGGCGGTCAGCCACTTTCTCAAAGGCAAAGACGA AGACGAGGACGTGGTGGCCGAGGAGAAAAAGCTTCTGAGCAATCCGCTCTTTCGAGCGACGCTCGGGCGTCTGTCGCCCT TCTGGCGGGTGATCGTGCTGGTGGAACTGACCGACATCGCCTTTTCGGTCGATTCGATCACCGCAGCGGTGGCCTTCAGC GACAAAGCCTGGGTGGTAATCGTCGGCGGCATTCTGGGTATTGTCACGATGCGCTTTGTGGCGGAATTGTTCATCAAGCT CATCGACCGCTACGTGCGTCTGGAGACGGCGGCCTTTCTGGCGGTGGGCTTTATCGGCTTCAAGATGATGACCGAGGTAG TGGCAAACCAGCTGCTTCCCAAGCTCCACTTCGAGACGCCGGAGTGGGTAGTGCTCGGCGTCGTGGCGGCCATCTTCGCC TGGGGTTTTACAAAAAAAAATGTTGAAAGCGACGTCGAAGAAGAAGCGTCGCTGCGCTCGTAG
Upstream 100 bases:
>100_bases ATATCTGTTGAAGTGTGATGTCTCGGACCTGCAATAGCGCAGATAATTGACATAGCACATTGTAATTCGCGTCATCTTCT GGAGGCTTAGGGTACTGCTG
Downstream 100 bases:
>100_bases GACGCATCAGCAGCCCGGGATGAACCGCAGGCGAGTGATGCTGTAATCGGTCACCAGGCGGTTACGGCGAATGCCAACCA AGACGGCAACGCCCTCTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MWEFLYDHLGFDLGVEPWDFAIIFALVFVEGALSADNAAVLAALTRTLPTDEERRRSLRYGIIGAFVFRFFAVLFAAWLI DNWPLKLAGALYLIYLAVSHFLKGKDEDEDVVAEEKKLLSNPLFRATLGRLSPFWRVIVLVELTDIAFSVDSITAAVAFS DKAWVVIVGGILGIVTMRFVAELFIKLIDRYVRLETAAFLAVGFIGFKMMTEVVANQLLPKLHFETPEWVVLGVVAAIFA WGFTKKNVESDVEEEASLRS
Sequences:
>Translated_260_residues MWEFLYDHLGFDLGVEPWDFAIIFALVFVEGALSADNAAVLAALTRTLPTDEERRRSLRYGIIGAFVFRFFAVLFAAWLI DNWPLKLAGALYLIYLAVSHFLKGKDEDEDVVAEEKKLLSNPLFRATLGRLSPFWRVIVLVELTDIAFSVDSITAAVAFS DKAWVVIVGGILGIVTMRFVAELFIKLIDRYVRLETAAFLAVGFIGFKMMTEVVANQLLPKLHFETPEWVVLGVVAAIFA WGFTKKNVESDVEEEASLRS >Mature_260_residues MWEFLYDHLGFDLGVEPWDFAIIFALVFVEGALSADNAAVLAALTRTLPTDEERRRSLRYGIIGAFVFRFFAVLFAAWLI DNWPLKLAGALYLIYLAVSHFLKGKDEDEDVVAEEKKLLSNPLFRATLGRLSPFWRVIVLVELTDIAFSVDSITAAVAFS DKAWVVIVGGILGIVTMRFVAELFIKLIDRYVRLETAAFLAVGFIGFKMMTEVVANQLLPKLHFETPEWVVLGVVAAIFA WGFTKKNVESDVEEEASLRS
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=202, Percent_Identity=28.7128712871287, Blast_Score=68, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022493 - InterPro: IPR005496 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 29190; Mature: 29190
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWEFLYDHLGFDLGVEPWDFAIIFALVFVEGALSADNAAVLAALTRTLPTDEERRRSLRY CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH GIIGAFVFRFFAVLFAAWLIDNWPLKLAGALYLIYLAVSHFLKGKDEDEDVVAEEKKLLS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH NPLFRATLGRLSPFWRVIVLVELTDIAFSVDSITAAVAFSDKAWVVIVGGILGIVTMRFV CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEHHHHHHHHHHHHH AELFIKLIDRYVRLETAAFLAVGFIGFKMMTEVVANQLLPKLHFETPEWVVLGVVAAIFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH WGFTKKNVESDVEEEASLRS HCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MWEFLYDHLGFDLGVEPWDFAIIFALVFVEGALSADNAAVLAALTRTLPTDEERRRSLRY CHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH GIIGAFVFRFFAVLFAAWLIDNWPLKLAGALYLIYLAVSHFLKGKDEDEDVVAEEKKLLS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH NPLFRATLGRLSPFWRVIVLVELTDIAFSVDSITAAVAFSDKAWVVIVGGILGIVTMRFV CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEHHHHHHHHHHHHH AELFIKLIDRYVRLETAAFLAVGFIGFKMMTEVVANQLLPKLHFETPEWVVLGVVAAIFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH WGFTKKNVESDVEEEASLRS HCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274031; 9384377 [H]