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The map label for this gene is apl [H]

Identifier: 37520124

GI number: 37520124

Start: 588705

End: 589307

Strand: Direct

Name: apl [H]

Synonym: glr0555

Alternate gene names: 37520124

Gene position: 588705-589307 (Clockwise)

Preceding gene: 37520118

Following gene: 37520128

Centisome position: 12.64

GC content: 63.02

Gene sequence:

>603_bases
ATGCTCGAAAGAGTGATCGAGGTCGTCGGGACGCTGGGCTATCTGGGCATCGCGGCGCTGATGTTTCTGGAGACCGTCGT
ACCGCCCATTCCATCCGAGGCGATCATGCCCCTGGCCGGGGTTGCCGCGGCGCAGGGCAAGTTGAACCTGCTCGGCGTGG
TGGTTTCTGGGACGATTGGGGCGTTGTTGGGTAATTTGCTCTGGTACTACCTGGGCAGGCGGATTGGTCCCAAGCGGCTT
GGCAGATGGGCGGATCGCTACGGCCGCTGGTTCGGCCTCTCGGCCCGGAGTGTGGACACAGCCCAACTCTGGTTTGCCAG
GTACGGAGCGGCAGCGGTGTTTTTGTGCCGTATGGTGCCGGGCATTCGTACCTGGATCTCGCTGCCGGCCGGGGCCGCCG
GGATGTCCCTGGTGCCGTTCTTGCTCTGTTCGGCCCTTGGAACCCTGCTGTGGACGGCGCTTTTGGCCTGGACAGGGCTG
CTGCTTGAAAATAACTACCGGCTGGCGGAGCAGCAGTTGGGTCCCCTCTCCGCTGTGGCCTTTGGGGGCCTTCTCTTTTT
GATCGTGCTCTGGAAGTTTCGCCGCAAAAACTCCGCCCCCTGA

Upstream 100 bases:

>100_bases
GCATCGAAGCGGCGGGCAGGGCGCTTCCACTGTACCGGCGGTGTAGGCGCAACGGTGCGCGCACCGCCGAAGATGGAAGT
GGGGAGCGCAAGGGGGACGC

Downstream 100 bases:

>100_bases
AATCGGGCGAACCGTTCGCTCAAGGTCCGACTGCTGCGGATTGCAGAGCAAAACTCTCGAAGACGACGGTCACATCTGGG
GCGTTGCTGGTCAGGGCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MLERVIEVVGTLGYLGIAALMFLETVVPPIPSEAIMPLAGVAAAQGKLNLLGVVVSGTIGALLGNLLWYYLGRRIGPKRL
GRWADRYGRWFGLSARSVDTAQLWFARYGAAAVFLCRMVPGIRTWISLPAGAAGMSLVPFLLCSALGTLLWTALLAWTGL
LLENNYRLAEQQLGPLSAVAFGGLLFLIVLWKFRRKNSAP

Sequences:

>Translated_200_residues
MLERVIEVVGTLGYLGIAALMFLETVVPPIPSEAIMPLAGVAAAQGKLNLLGVVVSGTIGALLGNLLWYYLGRRIGPKRL
GRWADRYGRWFGLSARSVDTAQLWFARYGAAAVFLCRMVPGIRTWISLPAGAAGMSLVPFLLCSALGTLLWTALLAWTGL
LLENNYRLAEQQLGPLSAVAFGGLLFLIVLWKFRRKNSAP
>Mature_200_residues
MLERVIEVVGTLGYLGIAALMFLETVVPPIPSEAIMPLAGVAAAQGKLNLLGVVVSGTIGALLGNLLWYYLGRRIGPKRL
GRWADRYGRWFGLSARSVDTAQLWFARYGAAAVFLCRMVPGIRTWISLPAGAAGMSLVPFLLCSALGTLLWTALLAWTGL
LLENNYRLAEQQLGPLSAVAFGGLLFLIVLWKFRRKNSAP

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=161, Percent_Identity=27.9503105590062, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21659; Mature: 21659

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLERVIEVVGTLGYLGIAALMFLETVVPPIPSEAIMPLAGVAAAQGKLNLLGVVVSGTIG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ALLGNLLWYYLGRRIGPKRLGRWADRYGRWFGLSARSVDTAQLWFARYGAAAVFLCRMVP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GIRTWISLPAGAAGMSLVPFLLCSALGTLLWTALLAWTGLLLENNYRLAEQQLGPLSAVA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHH
FGGLLFLIVLWKFRRKNSAP
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLERVIEVVGTLGYLGIAALMFLETVVPPIPSEAIMPLAGVAAAQGKLNLLGVVVSGTIG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
ALLGNLLWYYLGRRIGPKRLGRWADRYGRWFGLSARSVDTAQLWFARYGAAAVFLCRMVP
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
GIRTWISLPAGAAGMSLVPFLLCSALGTLLWTALLAWTGLLLENNYRLAEQQLGPLSAVA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHH
FGGLLFLIVLWKFRRKNSAP
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]