| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
Click here to switch to the map view.
The map label for this gene is macB [H]
Identifier: 37519914
GI number: 37519914
Start: 359542
End: 360747
Strand: Reverse
Name: macB [H]
Synonym: gll0345
Alternate gene names: 37519914
Gene position: 360747-359542 (Counterclockwise)
Preceding gene: 37519915
Following gene: 37519913
Centisome position: 7.74
GC content: 64.26
Gene sequence:
>1206_bases ATGTTGCTGATTGAAAGCTTGAGAATGGCCGTCGCCACCCTGGGCGCCAACAAGTTGCGCAGCGGCCTGACGATGCTCGG TATCGTCATCGGCAACGCCTCGGTGATCGCGATGGTGGGCATCGGCCAGGGCAGCCAGAATTTTATCGCCGGCAAGCTCG AGGCCTACGGCACCAACCGGATCACCGTATTTACCCAATCGGAAGATCCCGACGGCTACGTCTTTCCGGACTCGAAGCTG GTGCTCTCCGACGCCGAAGCCGTCCGCACCCAGGTGCCGGCGGTGCGCGCGGTGGCTCCGATTATCGAAGTGCGTTTGCC GATTTTTCTAGGCAGCCGCCGGACGGCCACCAACGTGCGCGGCACGACGCCGGATTTTGCCCGGGTGCAAAATTTTGCCG TCGAGCGCGGGCGGCTTTTTTCGCCCGACGAATTGCAGCGCGAGTCCCAGGTAGTGATCCTGGGAGCGACCACGGCGAAC AAACTGTTCGGCCGCGCCGCGCCCATCGGCCGGGAAGTGACGATCAACAACTTGCCTTTTCGGGTGGTGGGCCTGCTCAA GCCGAAGGGTTCGTTTGCCGGGGACAACCCGGACGAGACGGCCGTCGTGCCGGTGACGACGATGGCCAATCGGGTGGTGG GGCGGCGCTCGGCCTACGGCACACCCATCACTTACCTGGAGGCGATGGCGGTCGATTCCACTCAGATCCGCTCTGCCGGT TTCCAGATGCTCAACGTGCTGGAGCGCCTGCACGGCCGCAAGGACATCATCCTCTCGGCCAACAAGTCCTTTATCGACCT GGCCAACCAGGTGAGCGGCGCGCTGTCGCTGCTGCTGTCGCTGGTGGCGGCCGTTTCGCTGCTGGTGGGCGGCATCGGGA TCATGAACATGATGCTCGTCTCGGTAGGTGAGCGCACCCAGGAAATTGGTTTGCGCAAAGCGATCGGCGCCAAGCAGCGG GACATTCTCAGCCAGTTTTTGTTCGAGGCTGTCCTCCTTTCGGCGGCAGGCGGATTGGCGGGCATCGCCGTGGGCATCGG CGCAACGTTGCCGCTCGCCTGGTTCACCCCGATCCGGCCTCTGATTCCGTGGAGCGCCGTGCTGCTCGCGGTTGGGGTCT CAGGCACCATCGGTCTGGTGTTCGGCGTCTTTCCGGCGCGGCAGGCCGCCCGCCTCGACCCGATCGCGGCCTTGCGCAGC AGTTGA
Upstream 100 bases:
>100_bases AGTTCAGATCCTCGAAGGTCTGCGGCCCGGCGAGCGCGTCTTTTTGCAACCGCCCCCGGAGGTGGTCGTCGAAGGTGTCG ATACGCTGGTGTGGTAAGCG
Downstream 100 bases:
>100_bases TGGATTGCCACCGGAGGATAGACGTTGCCGGCTATGTTTGCCACGCCGGTGACCGTACTTCATCCCATTGTCCCACACCG GGTTTGCTACCCTTGGGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MLLIESLRMAVATLGANKLRSGLTMLGIVIGNASVIAMVGIGQGSQNFIAGKLEAYGTNRITVFTQSEDPDGYVFPDSKL VLSDAEAVRTQVPAVRAVAPIIEVRLPIFLGSRRTATNVRGTTPDFARVQNFAVERGRLFSPDELQRESQVVILGATTAN KLFGRAAPIGREVTINNLPFRVVGLLKPKGSFAGDNPDETAVVPVTTMANRVVGRRSAYGTPITYLEAMAVDSTQIRSAG FQMLNVLERLHGRKDIILSANKSFIDLANQVSGALSLLLSLVAAVSLLVGGIGIMNMMLVSVGERTQEIGLRKAIGAKQR DILSQFLFEAVLLSAAGGLAGIAVGIGATLPLAWFTPIRPLIPWSAVLLAVGVSGTIGLVFGVFPARQAARLDPIAALRS S
Sequences:
>Translated_401_residues MLLIESLRMAVATLGANKLRSGLTMLGIVIGNASVIAMVGIGQGSQNFIAGKLEAYGTNRITVFTQSEDPDGYVFPDSKL VLSDAEAVRTQVPAVRAVAPIIEVRLPIFLGSRRTATNVRGTTPDFARVQNFAVERGRLFSPDELQRESQVVILGATTAN KLFGRAAPIGREVTINNLPFRVVGLLKPKGSFAGDNPDETAVVPVTTMANRVVGRRSAYGTPITYLEAMAVDSTQIRSAG FQMLNVLERLHGRKDIILSANKSFIDLANQVSGALSLLLSLVAAVSLLVGGIGIMNMMLVSVGERTQEIGLRKAIGAKQR DILSQFLFEAVLLSAAGGLAGIAVGIGATLPLAWFTPIRPLIPWSAVLLAVGVSGTIGLVFGVFPARQAARLDPIAALRS S >Mature_401_residues MLLIESLRMAVATLGANKLRSGLTMLGIVIGNASVIAMVGIGQGSQNFIAGKLEAYGTNRITVFTQSEDPDGYVFPDSKL VLSDAEAVRTQVPAVRAVAPIIEVRLPIFLGSRRTATNVRGTTPDFARVQNFAVERGRLFSPDELQRESQVVILGATTAN KLFGRAAPIGREVTINNLPFRVVGLLKPKGSFAGDNPDETAVVPVTTMANRVVGRRSAYGTPITYLEAMAVDSTQIRSAG FQMLNVLERLHGRKDIILSANKSFIDLANQVSGALSLLLSLVAAVSLLVGGIGIMNMMLVSVGERTQEIGLRKAIGAKQR DILSQFLFEAVLLSAAGGLAGIAVGIGATLPLAWFTPIRPLIPWSAVLLAVGVSGTIGLVFGVFPARQAARLDPIAALRS S
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=400, Percent_Identity=36, Blast_Score=209, Evalue=3e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 42397; Mature: 42397
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLIESLRMAVATLGANKLRSGLTMLGIVIGNASVIAMVGIGQGSQNFIAGKLEAYGTNR CEEHHHHHHHHHHHCHHHHHCCHHEEEHEECCCEEEEEEECCCCCCCEEEEEHEECCCCE ITVFTQSEDPDGYVFPDSKLVLSDAEAVRTQVPAVRAVAPIIEVRLPIFLGSRRTATNVR EEEEECCCCCCCEECCCCCEEECCHHHHHHHCCHHHHHHHHHHHEEHEEECCCCCCCCCC GTTPDFARVQNFAVERGRLFSPDELQRESQVVILGATTANKLFGRAAPIGREVTINNLPF CCCCHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEECHHHHHHHCCCCCCCEEEECCCCE RVVGLLKPKGSFAGDNPDETAVVPVTTMANRVVGRRSAYGTPITYLEAMAVDSTQIRSAG EEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHH FQMLNVLERLHGRKDIILSANKSFIDLANQVSGALSLLLSLVAAVSLLVGGIGIMNMMLV HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVGERTQEIGLRKAIGAKQRDILSQFLFEAVLLSAAGGLAGIAVGIGATLPLAWFTPIRP HHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCCCCH LIPWSAVLLAVGVSGTIGLVFGVFPARQAARLDPIAALRSS HCCHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCHHHHHHCC >Mature Secondary Structure MLLIESLRMAVATLGANKLRSGLTMLGIVIGNASVIAMVGIGQGSQNFIAGKLEAYGTNR CEEHHHHHHHHHHHCHHHHHCCHHEEEHEECCCEEEEEEECCCCCCCEEEEEHEECCCCE ITVFTQSEDPDGYVFPDSKLVLSDAEAVRTQVPAVRAVAPIIEVRLPIFLGSRRTATNVR EEEEECCCCCCCEECCCCCEEECCHHHHHHHCCHHHHHHHHHHHEEHEEECCCCCCCCCC GTTPDFARVQNFAVERGRLFSPDELQRESQVVILGATTANKLFGRAAPIGREVTINNLPF CCCCHHHHHHHHHHHCCCCCCCHHHCCCCCEEEEEECHHHHHHHCCCCCCCEEEECCCCE RVVGLLKPKGSFAGDNPDETAVVPVTTMANRVVGRRSAYGTPITYLEAMAVDSTQIRSAG EEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHH FQMLNVLERLHGRKDIILSANKSFIDLANQVSGALSLLLSLVAAVSLLVGGIGIMNMMLV HHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVGERTQEIGLRKAIGAKQRDILSQFLFEAVLLSAAGGLAGIAVGIGATLPLAWFTPIRP HHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHCCCCH LIPWSAVLLAVGVSGTIGLVFGVFPARQAARLDPIAALRSS HCCHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA