Click here to switch to the map view.

The map label for this gene is ybjY [C]

Identifier: 37519915

GI number: 37519915

Start: 360751

End: 362079

Strand: Reverse

Name: ybjY [C]

Synonym: gll0346

Alternate gene names: 37519915

Gene position: 362079-360751 (Counterclockwise)

Preceding gene: 37519919

Following gene: 37519914

Centisome position: 7.77

GC content: 67.42

Gene sequence:

>1329_bases
GTGTTGCTCAAGTGGAAGCGGCCGTTGCCCTGGTTGATCGGGCTGGCGATATTTGGGACGGGTGCCGCGGCCGTGATCTA
CGTGCTCGGCGCGCAAAGCGGTCTTTCGCAAGCGCAGGTGGCGGCCATGACGATCCCGGTCGCCACCACCAATCTTGGGC
AGCAGGTGCAGGCCAGCGGCCTGGTACAACCCATACGCAAAACCAATCTCAGCCCCAGGCAGGCAGGTCGCATCGGCAGG
TTGCTGGTGGACGAAGGCAGACAGGTTAAGCAAGGAGAATTGGTGGCCCAGATGGAAAGCCGCCTGCCCGAGGCCCAGGT
GCGACAGGCCGAGGCGTCCCTCGCCCGCGCCCAGGCCGAACTTTTGCAGAAGCGGCGGGGTGCCCGTCCGGAGGAGATCC
GCGAGGCGCAAGCCCGCCTGCTAAGCGCCGAAGCCGCTGTGCGGCAGGGGGCGGCCCGGCTGGAGCGCACCGGTGAGGAA
TTGGCGCGCTACCGGCGGTTGGCGGGCGAAGGGGCAACCAGCCAGAATGCGCTGTCCGATTACGTCAACCGCGAACGGGA
GGCTGCGGCCAATCTCGCGGGCCAACGCTCGCAGTTGGAGGCACAGGCTCAGGTGCTAGCGCGGCTGCGCAAAGGCACGC
GCATCGAAGAAATCCGGCAGGCGGAGGCGGGAGTCGCCCTGGCCCAGGCGCAGCTCGATTACTTCCGGACACAGCTGGAA
GAGACGAGAGTCTACGCCCCATTTGCAGGGGTGATCAGCCGCCGGTTCGCCCAGCAGGGTGACTACGTCACCCCGAGCAC
CGCCGCCTCCACCAGCGACGGCGCGAGCAGCACTTCGATCGTGGAGTTGGTGAGCGGGCTGGAGGTGGAGGCGAAGGTGC
CCGAGGCGAGCCTCGCGCAGATCTACCCGGGGCAGGCGGTCCAGATCCGCACCGACGCCTACCCGGGAGCGGTGTTCAAG
GGGCGGGTCAGGCTGGTGACGCCGCGGGCGGTGCGCGAAGAGAACGTCACCACCATCCGCGTGAAGGTAACGCTACTTTC
CGGGCAAGGGCAGTTGCGCCCGGGCTTGAACGTCAAAGTGAACTTCACAGCCGCCACCCTCGCGGGTGTGAGCACGATCC
CGCTTGCGGCGGTGATCTCCAAGCAGGACGGCCAGACGGGGGTGCTGGTGCCCACCGCCGGCAACCGCGCCCAATTTCGG
CCGGTGCGCCTCGGCACCTCGGCGGGCAGCAAAGTTCAGATCCTCGAAGGTCTGCGGCCCGGCGAGCGCGTCTTTTTGCA
ACCGCCCCCGGAGGTGGTCGTCGAAGGTGTCGATACGCTGGTGTGGTAA

Upstream 100 bases:

>100_bases
CAAATCCGGACGCTTCCCGATACTCTGAAGTCGGGGCTCGCGCGGTACCGGTAGCTCGGTCCACTGTCCGCGCGGATCGT
TTCGATAGGAGACGGCACCT

Downstream 100 bases:

>100_bases
GCGATGTTGCTGATTGAAAGCTTGAGAATGGCCGTCGCCACCCTGGGCGCCAACAAGTTGCGCAGCGGCCTGACGATGCT
CGGTATCGTCATCGGCAACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MLLKWKRPLPWLIGLAIFGTGAAAVIYVLGAQSGLSQAQVAAMTIPVATTNLGQQVQASGLVQPIRKTNLSPRQAGRIGR
LLVDEGRQVKQGELVAQMESRLPEAQVRQAEASLARAQAELLQKRRGARPEEIREAQARLLSAEAAVRQGAARLERTGEE
LARYRRLAGEGATSQNALSDYVNREREAAANLAGQRSQLEAQAQVLARLRKGTRIEEIRQAEAGVALAQAQLDYFRTQLE
ETRVYAPFAGVISRRFAQQGDYVTPSTAASTSDGASSTSIVELVSGLEVEAKVPEASLAQIYPGQAVQIRTDAYPGAVFK
GRVRLVTPRAVREENVTTIRVKVTLLSGQGQLRPGLNVKVNFTAATLAGVSTIPLAAVISKQDGQTGVLVPTAGNRAQFR
PVRLGTSAGSKVQILEGLRPGERVFLQPPPEVVVEGVDTLVW

Sequences:

>Translated_442_residues
MLLKWKRPLPWLIGLAIFGTGAAAVIYVLGAQSGLSQAQVAAMTIPVATTNLGQQVQASGLVQPIRKTNLSPRQAGRIGR
LLVDEGRQVKQGELVAQMESRLPEAQVRQAEASLARAQAELLQKRRGARPEEIREAQARLLSAEAAVRQGAARLERTGEE
LARYRRLAGEGATSQNALSDYVNREREAAANLAGQRSQLEAQAQVLARLRKGTRIEEIRQAEAGVALAQAQLDYFRTQLE
ETRVYAPFAGVISRRFAQQGDYVTPSTAASTSDGASSTSIVELVSGLEVEAKVPEASLAQIYPGQAVQIRTDAYPGAVFK
GRVRLVTPRAVREENVTTIRVKVTLLSGQGQLRPGLNVKVNFTAATLAGVSTIPLAAVISKQDGQTGVLVPTAGNRAQFR
PVRLGTSAGSKVQILEGLRPGERVFLQPPPEVVVEGVDTLVW
>Mature_442_residues
MLLKWKRPLPWLIGLAIFGTGAAAVIYVLGAQSGLSQAQVAAMTIPVATTNLGQQVQASGLVQPIRKTNLSPRQAGRIGR
LLVDEGRQVKQGELVAQMESRLPEAQVRQAEASLARAQAELLQKRRGARPEEIREAQARLLSAEAAVRQGAARLERTGEE
LARYRRLAGEGATSQNALSDYVNREREAAANLAGQRSQLEAQAQVLARLRKGTRIEEIRQAEAGVALAQAQLDYFRTQLE
ETRVYAPFAGVISRRFAQQGDYVTPSTAASTSDGASSTSIVELVSGLEVEAKVPEASLAQIYPGQAVQIRTDAYPGAVFK
GRVRLVTPRAVREENVTTIRVKVTLLSGQGQLRPGLNVKVNFTAATLAGVSTIPLAAVISKQDGQTGVLVPTAGNRAQFR
PVRLGTSAGSKVQILEGLRPGERVFLQPPPEVVVEGVDTLVW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0194 family [H]

Homologues:

Organism=Escherichia coli, GI87081796, Length=428, Percent_Identity=24.5327102803738, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1787013, Length=307, Percent_Identity=28.9902280130293, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143
- InterPro:   IPR022936 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 47452; Mature: 47452

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKWKRPLPWLIGLAIFGTGAAAVIYVLGAQSGLSQAQVAAMTIPVATTNLGQQVQASG
CCCCCCCCCHHHHHHHHHCCCHHHHHEECCCCCCCCHHHEEEEEEEEEECCCCHHHHHHH
LVQPIRKTNLSPRQAGRIGRLLVDEGRQVKQGELVAQMESRLPEAQVRQAEASLARAQAE
HHHHHHHCCCCHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LLQKRRGARPEEIREAQARLLSAEAAVRQGAARLERTGEELARYRRLAGEGATSQNALSD
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
YVNREREAAANLAGQRSQLEAQAQVLARLRKGTRIEEIRQAEAGVALAQAQLDYFRTQLE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETRVYAPFAGVISRRFAQQGDYVTPSTAASTSDGASSTSIVELVSGLEVEAKVPEASLAQ
HCEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCHHHH
IYPGQAVQIRTDAYPGAVFKGRVRLVTPRAVREENVTTIRVKVTLLSGQGQLRPGLNVKV
CCCCCEEEEEECCCCCCEEECEEEEECCHHHCCCCCEEEEEEEEEEECCCCCCCCCEEEE
NFTAATLAGVSTIPLAAVISKQDGQTGVLVPTAGNRAQFRPVRLGTSAGSKVQILEGLRP
EEEHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEHHHHCCCC
GERVFLQPPPEVVVEGVDTLVW
CCEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLLKWKRPLPWLIGLAIFGTGAAAVIYVLGAQSGLSQAQVAAMTIPVATTNLGQQVQASG
CCCCCCCCCHHHHHHHHHCCCHHHHHEECCCCCCCCHHHEEEEEEEEEECCCCHHHHHHH
LVQPIRKTNLSPRQAGRIGRLLVDEGRQVKQGELVAQMESRLPEAQVRQAEASLARAQAE
HHHHHHHCCCCHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LLQKRRGARPEEIREAQARLLSAEAAVRQGAARLERTGEELARYRRLAGEGATSQNALSD
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
YVNREREAAANLAGQRSQLEAQAQVLARLRKGTRIEEIRQAEAGVALAQAQLDYFRTQLE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETRVYAPFAGVISRRFAQQGDYVTPSTAASTSDGASSTSIVELVSGLEVEAKVPEASLAQ
HCEEECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCHHHH
IYPGQAVQIRTDAYPGAVFKGRVRLVTPRAVREENVTTIRVKVTLLSGQGQLRPGLNVKV
CCCCCEEEEEECCCCCCEEECEEEEECCHHHCCCCCEEEEEEEEEEECCCCCCCCCEEEE
NFTAATLAGVSTIPLAAVISKQDGQTGVLVPTAGNRAQFRPVRLGTSAGSKVQILEGLRP
EEEHHHHHCCHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEHHHHCCCC
GERVFLQPPPEVVVEGVDTLVW
CCEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA