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The map label for this gene is ybdA [C]

Identifier: 37519652

GI number: 37519652

Start: 84082

End: 85326

Strand: Reverse

Name: ybdA [C]

Synonym: gll0083

Alternate gene names: 37519652

Gene position: 85326-84082 (Counterclockwise)

Preceding gene: 37519653

Following gene: 37519651

Centisome position: 1.83

GC content: 61.69

Gene sequence:

>1245_bases
ATGGCACCCACGACCCAGGATTCCTCACAGCAGCACAAAACCCTCGGTTTTCGCGACGTCCTGCGCAACCGGAATTTCCT
GTTTTTGTGGAGCGGACAGGTCTTCTCGCAACTGGCCGACAAGATTTTTCTGGTCTATATGATCGCGCTGATCGCCGTGC
ACTTTACCGAGGCGCTCACCGCCCAACTGTCCTCGGGGATCATGATCGCTTCTTCCGTCCCGGCCATCTTGTTCGGTTCG
GTGGCCGGGGTCTACGTCGATCGCTGGCCCAAAAAGACGGTGCTCATCGTCTCCAATCTGCTGCGTGGTCTATTCGTACT
GGTGGTGCCCTTCTTACCCGTTCAGTACGCCTTCTGGCTGGCGCTCACTTTCTTGGTCTCGACGCTCACTCAATTTTTTG
CGCCGGCGGAGACGGCGGCGATCCCGCTGATTGTCGAGCGGCGCGGGTTACTGTCGGCCAATTCGCTCTTTACCGCCACG
ATGATGGTGGCGGCGGTGGTCGGTTTTGCCATCGGCGAGCCGCTGCTGAGCCTCATCGGCGGGGCGGACGACGGCCACTG
GATCGTGGGCGGCGCCTACGTGATCGCTTCACTGCTCATCGGGTTTATGCACACCGGCGAGAAGGAATCTCTCAAGCACC
GCCCCGAGCCGAATCTGGCCAAAGACCTGCGCGAAGGATTCGTCTACCTCAAGCAGAACGCCGGTGTGCGCTTTGCCTTT
GTGCAACTGGTTGTGCTCTACAGCGTCATCGCCGCCCTCACGATCCTGGCAATCAACCTGGCCCCCGCCATCGGCCTCAA
GCAGGAGCAATTCGGCTTCCTGCTCGCCTCGGCCAGCGGCGGTCTGGTGGCAGGAGCGATCGCGGTGGGCAAGTTCGGCA
ACCGCCTACCGCGCCCGAGCCTCGCCCTGGTCGGGGCGATCTTGATGGGAGCGGCATTGATTGGCCTGTACTGGGCGAGC
AATGTCTGGTCGGCCCTCTCGCTCACTTTGTTGTTGGGTCTGGGGGGCGCCTGCATCGGGGTGCCGATGCAAACCCTGAT
CCAGGAGCAGACCCCCGAGCAGATGCGCGGCAAGGTCTTCGGCCTGCAGAACAACCTGGTCAATATCGCCCTCAGCCTGC
CTCTGGTGCTCGCGGAGCGGGCCGCTGCCCTGTTCGGTCTGCGTCCTGTTATTCTGGCTCTAGGTCTGGTGGTGCTGCTG
GCAGGGTTCGTGAGCAAATGGTTCTCCCGGGACCTCTCGAAATGA

Upstream 100 bases:

>100_bases
TTGACCGGCCGCTCCGGGCAGCGACACTGCTGGAGATCTGTTTTGAGCCGCTCGCCGTCCCGGCGGCTGCTTCGCCCCAA
TAACCCGACGGCGCGTTTTT

Downstream 100 bases:

>100_bases
TCCGATGCATATAGCCTGGCTGGGTAAGAAGACCCCTTTTTGCGGAAACGTTACCTACAGTCGCGAAGTGACCAACGCCC
TGATGGAGTTGGGACACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Facilitator Superfamily Protein; MFS Family Permease; Transporter Facilitator Family; Facilitator Superfamily Permease; Facilitator Superfamily Transporter; Transporter Facilitator Family Protein; Multidrug Efflux Transporter MFS Family Protein; MFS Superfamily Transporter; MFS Family Transporter Protein; Facilitator Superfamily Transporter Permease; Facilitator Superfamily Multidrug-Efflux Transporter

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MAPTTQDSSQQHKTLGFRDVLRNRNFLFLWSGQVFSQLADKIFLVYMIALIAVHFTEALTAQLSSGIMIASSVPAILFGS
VAGVYVDRWPKKTVLIVSNLLRGLFVLVVPFLPVQYAFWLALTFLVSTLTQFFAPAETAAIPLIVERRGLLSANSLFTAT
MMVAAVVGFAIGEPLLSLIGGADDGHWIVGGAYVIASLLIGFMHTGEKESLKHRPEPNLAKDLREGFVYLKQNAGVRFAF
VQLVVLYSVIAALTILAINLAPAIGLKQEQFGFLLASASGGLVAGAIAVGKFGNRLPRPSLALVGAILMGAALIGLYWAS
NVWSALSLTLLLGLGGACIGVPMQTLIQEQTPEQMRGKVFGLQNNLVNIALSLPLVLAERAAALFGLRPVILALGLVVLL
AGFVSKWFSRDLSK

Sequences:

>Translated_414_residues
MAPTTQDSSQQHKTLGFRDVLRNRNFLFLWSGQVFSQLADKIFLVYMIALIAVHFTEALTAQLSSGIMIASSVPAILFGS
VAGVYVDRWPKKTVLIVSNLLRGLFVLVVPFLPVQYAFWLALTFLVSTLTQFFAPAETAAIPLIVERRGLLSANSLFTAT
MMVAAVVGFAIGEPLLSLIGGADDGHWIVGGAYVIASLLIGFMHTGEKESLKHRPEPNLAKDLREGFVYLKQNAGVRFAF
VQLVVLYSVIAALTILAINLAPAIGLKQEQFGFLLASASGGLVAGAIAVGKFGNRLPRPSLALVGAILMGAALIGLYWAS
NVWSALSLTLLLGLGGACIGVPMQTLIQEQTPEQMRGKVFGLQNNLVNIALSLPLVLAERAAALFGLRPVILALGLVVLL
AGFVSKWFSRDLSK
>Mature_413_residues
APTTQDSSQQHKTLGFRDVLRNRNFLFLWSGQVFSQLADKIFLVYMIALIAVHFTEALTAQLSSGIMIASSVPAILFGSV
AGVYVDRWPKKTVLIVSNLLRGLFVLVVPFLPVQYAFWLALTFLVSTLTQFFAPAETAAIPLIVERRGLLSANSLFTATM
MVAAVVGFAIGEPLLSLIGGADDGHWIVGGAYVIASLLIGFMHTGEKESLKHRPEPNLAKDLREGFVYLKQNAGVRFAFV
QLVVLYSVIAALTILAINLAPAIGLKQEQFGFLLASASGGLVAGAIAVGKFGNRLPRPSLALVGAILMGAALIGLYWASN
VWSALSLTLLLGLGGACIGVPMQTLIQEQTPEQMRGKVFGLQNNLVNIALSLPLVLAERAAALFGLRPVILALGLVVLLA
GFVSKWFSRDLSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44332; Mature: 44201

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPTTQDSSQQHKTLGFRDVLRNRNFLFLWSGQVFSQLADKIFLVYMIALIAVHFTEALT
CCCCCCCCCHHHHHCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLSSGIMIASSVPAILFGSVAGVYVDRWPKKTVLIVSNLLRGLFVLVVPFLPVQYAFWL
HHHHCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTFLVSTLTQFFAPAETAAIPLIVERRGLLSANSLFTATMMVAAVVGFAIGEPLLSLIG
HHHHHHHHHHHHHCCHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GADDGHWIVGGAYVIASLLIGFMHTGEKESLKHRPEPNLAKDLREGFVYLKQNAGVRFAF
CCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHEEHCCCCCCHHHH
VQLVVLYSVIAALTILAINLAPAIGLKQEQFGFLLASASGGLVAGAIAVGKFGNRLPRPS
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCEEEEECCCCHHHHHHHHHHHCCCCCCCH
LALVGAILMGAALIGLYWASNVWSALSLTLLLGLGGACIGVPMQTLIQEQTPEQMRGKVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCHHHCCHHH
GLQNNLVNIALSLPLVLAERAAALFGLRPVILALGLVVLLAGFVSKWFSRDLSK
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
APTTQDSSQQHKTLGFRDVLRNRNFLFLWSGQVFSQLADKIFLVYMIALIAVHFTEALT
CCCCCCCCHHHHHCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQLSSGIMIASSVPAILFGSVAGVYVDRWPKKTVLIVSNLLRGLFVLVVPFLPVQYAFWL
HHHHCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTFLVSTLTQFFAPAETAAIPLIVERRGLLSANSLFTATMMVAAVVGFAIGEPLLSLIG
HHHHHHHHHHHHHCCHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GADDGHWIVGGAYVIASLLIGFMHTGEKESLKHRPEPNLAKDLREGFVYLKQNAGVRFAF
CCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHEEHCCCCCCHHHH
VQLVVLYSVIAALTILAINLAPAIGLKQEQFGFLLASASGGLVAGAIAVGKFGNRLPRPS
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCEEEEECCCCHHHHHHHHHHHCCCCCCCH
LALVGAILMGAALIGLYWASNVWSALSLTLLLGLGGACIGVPMQTLIQEQTPEQMRGKVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCCHHHCCHHH
GLQNNLVNIALSLPLVLAERAAALFGLRPVILALGLVVLLAGFVSKWFSRDLSK
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA