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The map label for this gene is recO

Identifier: 37519653

GI number: 37519653

Start: 85344

End: 86129

Strand: Reverse

Name: recO

Synonym: gll0084

Alternate gene names: 37519653

Gene position: 86129-85344 (Counterclockwise)

Preceding gene: 37519658

Following gene: 37519652

Centisome position: 1.85

GC content: 65.27

Gene sequence:

>786_bases
TTGTCTGGGAAAACCTACCGGGCCACCGGCATCAACCTGCGGCGCATGCCCCTTGGCGAAAGCGATTTGCTCATGACGAT
TCTGACGCGCGAGAACGGCCTGGTGCGGGCGGTCGCCCGAGGAGCGCGCAAGGCCAACGCCCGGATCGGCGGGCGCACCG
AGCAATTTGTCGTCAACGACCTGCAGCTGTACCGGGGCCGCAGCCTCGACCAGCTCACCCAGGCGGAGAGCTTGCGCACT
TTCCCGGGCCTGCTGCAGGATCTAGGCCGCCTCACCGCGGCGCAGTACCTGGCCGAAGGGGTGCTGCAGGAAGCCACCGA
GGGCCAGGCCCAAGAAGACCTTTACGATCTGCTGTTGGTCCACCTGGAGCGGCTCGCCGCCACCCCTTCCCACCAGATCG
CCGCCCGCCTGGTGCACGGGGTGTATCAGTTGTTGGCCGTGGGCGGTGTGGCGCCGGAAGTGCATTTTTGTACCGTGAGC
CACCGGCCGATTTCAGCCGAATCGGCCGGTTTTAGCGTCGAAGGGGGTGGGCTCGTGGCCCTCGAGTGCCTGTCCCACGA
GCGGGTGGGTTTTCGCCTCGATATCGAACAGGTGGCGGCCTTGCAGCTATTGGCCGATGCGGATCTGACGCCCGCGAGCC
TCGATTGGAACTATCTGTGGATCGGTTTGGAGCGGCTGTTGCGCCGCCATATCGAATTCCACTTTGACCGGCCGCTCCGG
GCAGCGACACTGCTGGAGATCTGTTTTGAGCCGCTCGCCGTCCCGGCGGCTGCTTCGCCCCAATAA

Upstream 100 bases:

>100_bases
TGATACCAGGGGGGCTCCGGTTCTGTCCAGGGGAGCGAACAAGCGCTCGGCGGGGCGGTACATTAGAAAGACGGCTACCC
ATCCATAGGTAAAAACGCTC

Downstream 100 bases:

>100_bases
CCCGACGGCGCGTTTTTATGGCACCCACGACCCAGGATTCCTCACAGCAGCACAAAACCCTCGGTTTTCGCGACGTCCTG
CGCAACCGGAATTTCCTGTT

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSGKTYRATGINLRRMPLGESDLLMTILTRENGLVRAVARGARKANARIGGRTEQFVVNDLQLYRGRSLDQLTQAESLRT
FPGLLQDLGRLTAAQYLAEGVLQEATEGQAQEDLYDLLLVHLERLAATPSHQIAARLVHGVYQLLAVGGVAPEVHFCTVS
HRPISAESAGFSVEGGGLVALECLSHERVGFRLDIEQVAALQLLADADLTPASLDWNYLWIGLERLLRRHIEFHFDRPLR
AATLLEICFEPLAVPAAASPQ

Sequences:

>Translated_261_residues
MSGKTYRATGINLRRMPLGESDLLMTILTRENGLVRAVARGARKANARIGGRTEQFVVNDLQLYRGRSLDQLTQAESLRT
FPGLLQDLGRLTAAQYLAEGVLQEATEGQAQEDLYDLLLVHLERLAATPSHQIAARLVHGVYQLLAVGGVAPEVHFCTVS
HRPISAESAGFSVEGGGLVALECLSHERVGFRLDIEQVAALQLLADADLTPASLDWNYLWIGLERLLRRHIEFHFDRPLR
AATLLEICFEPLAVPAAASPQ
>Mature_260_residues
SGKTYRATGINLRRMPLGESDLLMTILTRENGLVRAVARGARKANARIGGRTEQFVVNDLQLYRGRSLDQLTQAESLRTF
PGLLQDLGRLTAAQYLAEGVLQEATEGQAQEDLYDLLLVHLERLAATPSHQIAARLVHGVYQLLAVGGVAPEVHFCTVSH
RPISAESAGFSVEGGGLVALECLSHERVGFRLDIEQVAALQLLADADLTPASLDWNYLWIGLERLLRRHIEFHFDRPLRA
ATLLEICFEPLAVPAAASPQ

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_GLOVI (Q7NPH1)

Other databases:

- EMBL:   BA000045
- RefSeq:   NP_923030.1
- GeneID:   2600061
- GenomeReviews:   BA000045_GR
- KEGG:   gvi:gll0084
- NMPDR:   fig|251221.1.peg.84
- HOGENOM:   HBG634481
- OMA:   YKATGIN
- ProtClustDB:   PRK00085
- BioCyc:   GVIO251221:GLL0084-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 28652; Mature: 28521

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKTYRATGINLRRMPLGESDLLMTILTRENGLVRAVARGARKANARIGGRTEQFVVND
CCCCEEEECCCEEEECCCCCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
LQLYRGRSLDQLTQAESLRTFPGLLQDLGRLTAAQYLAEGVLQEATEGQAQEDLYDLLLV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
HLERLAATPSHQIAARLVHGVYQLLAVGGVAPEVHFCTVSHRPISAESAGFSVEGGGLVA
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEECCCCEEE
LECLSHERVGFRLDIEQVAALQLLADADLTPASLDWNYLWIGLERLLRRHIEFHFDRPLR
EEECCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH
AATLLEICFEPLAVPAAASPQ
HHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SGKTYRATGINLRRMPLGESDLLMTILTRENGLVRAVARGARKANARIGGRTEQFVVND
CCCEEEECCCEEEECCCCCCHHEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHH
LQLYRGRSLDQLTQAESLRTFPGLLQDLGRLTAAQYLAEGVLQEATEGQAQEDLYDLLLV
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
HLERLAATPSHQIAARLVHGVYQLLAVGGVAPEVHFCTVSHRPISAESAGFSVEGGGLVA
HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEECCCCEEE
LECLSHERVGFRLDIEQVAALQLLADADLTPASLDWNYLWIGLERLLRRHIEFHFDRPLR
EEECCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH
AATLLEICFEPLAVPAAASPQ
HHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 14621292