| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is 37519588
Identifier: 37519588
GI number: 37519588
Start: 15608
End: 16990
Strand: Reverse
Name: 37519588
Synonym: gll0019
Alternate gene names: NA
Gene position: 16990-15608 (Counterclockwise)
Preceding gene: 37519589
Following gene: 37519587
Centisome position: 0.36
GC content: 66.16
Gene sequence:
>1383_bases GTGCCCCCGGCCCTTTCAGACCCGCTCCAGGGGGGAGCGGCGGTGGATGTGGGCGGTCCCCTCTCGCTCGATGAATTGCT CTCGCGCGTCGAGCGCTACCACCCGAAGCTGTTGGGTGCCTTTGTCGCCCGGCGCATCGCCTCAGCCAAGCTGCTGGAGA AGCAAGGAGCCTTCGACCCGGTCTTTCGCGCCTACAGTGAATCGATCGAGTACAACAGCACCTCGGCGCGCGGTAGGTTC AGCGCCGCCTTCCAAAACGAGCTCAAAGTCGAATTTCCGACCCGCTCCGGCATCAAGTACGACTTCGGCGCCCGCTACAA CGTCGGGAACGTCAAATCGCCCTTGTCCTCCACCGGCGACACCGGGGAGTACTTTGTGAGCTTCTCGGTGCCGCTGTTGC GCGGGCTGGGCATCAATGAAAAAGCCCTGGCCGAGCAGCAGGCGCAACTGGGCGAGCCGCTTGCCCAGGCCGAATTGGTG CAGACGCGCCAGGAGCTCAAGCTCAAGGCGGCCACCAGCTACTGGGACTGGGTGGCGGCAGGACGGCGGCTCACGGTGGC CCGCGAGGTGCTCGACCTGGCGCAGGTGCGGTTGGCGGCGATCAATAACCGGGCCGGTTCCGGAGATTTGCCGGCCATCG ACGCGGTGGAGGCCGAGCAGGAGGTGCGGTTGCGCCGGGGGGAACTGGTCAAAGCCGAGCGCGACGTCCAAAAAGAAGCC TTCAAGCTCTCGCTCTACTTCTGGCAGGAGGACGGTCGCCAGGGACCGCCGCCGTCGCTGGCGCGCCTGCCCGCCGAATC GTCTCCGCCCACGGCAATCGACCCGAGCATTCTCGCAGCGGCCCAGCGCGAAGCCATCGAGCGCCGCCCCGAACTGCAGC GGCTGGCACTGCAGCGCGACAGTGCCCGGTTGGATCTGGCCCTCGCCGAAAACCAACGCCTGCCGGGGTTAGATCTCTAC GTGAGCCCTGGGCTCGATACCGGCAATTTTTCAGTCGGCGGCACGCTCAAATTCGGCGTCGCCGTCACTCTGCCCCTCGC TCAGCGCACCGCCGACGGCCTCATCGAGCAAGCCCGCCTGAAGATGCAGAAAGTCGACCTCGATTCGCTCGGCGAGCGCC AGCGTATCCTCACCGATGTAATCGACGCGGTCTCCGCCGTCGATGCGGCCTACCGGCGCTACGAGAACGCCACCCAGGAA ACCCAGTTTGCCCGTCGGCTCGAACAGGGCGAGCGCGACCGCTTCGTGCTGGGCGACAGCACCGTGTTTCTGGTCAACCA GCGCGAGCGCGGCTACGCCTCCGCCCGCACCAAACAGATCGACTCCCAGGCCGAATACGAACGGGCGCTTGCCACCTTCC GGGCCGTCACCGGCCAGTTTTAA
Upstream 100 bases:
>100_bases GTCCATCCCGATGTGTCCCCGGGCGAAGCGTCGCTGTGCCCTTAGCCTCGCCCTCACCTTCGCACTCGCTCTGCCTGCCG CTGCCCTGGCCCAGCCCGAA
Downstream 100 bases:
>100_bases GGCCATCGAAACAATCTACGGCAAGCCCACCGATTTTTTGTTGTATTCTCGGCGGCCAGTTGCTAGGATTTGTGGAGTTC CAGTCTCCCTGCGCTTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Component Of Multidrug Efflux Pump; Outer Membrane Protein-Like Protein; Outer Membrane Protein; Outer Membrane Protein-Like; Signal Peptide; Multidrug Efflux Protein Outer Membrane Component
Number of amino acids: Translated: 460; Mature: 459
Protein sequence:
>460_residues MPPALSDPLQGGAAVDVGGPLSLDELLSRVERYHPKLLGAFVARRIASAKLLEKQGAFDPVFRAYSESIEYNSTSARGRF SAAFQNELKVEFPTRSGIKYDFGARYNVGNVKSPLSSTGDTGEYFVSFSVPLLRGLGINEKALAEQQAQLGEPLAQAELV QTRQELKLKAATSYWDWVAAGRRLTVAREVLDLAQVRLAAINNRAGSGDLPAIDAVEAEQEVRLRRGELVKAERDVQKEA FKLSLYFWQEDGRQGPPPSLARLPAESSPPTAIDPSILAAAQREAIERRPELQRLALQRDSARLDLALAENQRLPGLDLY VSPGLDTGNFSVGGTLKFGVAVTLPLAQRTADGLIEQARLKMQKVDLDSLGERQRILTDVIDAVSAVDAAYRRYENATQE TQFARRLEQGERDRFVLGDSTVFLVNQRERGYASARTKQIDSQAEYERALATFRAVTGQF
Sequences:
>Translated_460_residues MPPALSDPLQGGAAVDVGGPLSLDELLSRVERYHPKLLGAFVARRIASAKLLEKQGAFDPVFRAYSESIEYNSTSARGRF SAAFQNELKVEFPTRSGIKYDFGARYNVGNVKSPLSSTGDTGEYFVSFSVPLLRGLGINEKALAEQQAQLGEPLAQAELV QTRQELKLKAATSYWDWVAAGRRLTVAREVLDLAQVRLAAINNRAGSGDLPAIDAVEAEQEVRLRRGELVKAERDVQKEA FKLSLYFWQEDGRQGPPPSLARLPAESSPPTAIDPSILAAAQREAIERRPELQRLALQRDSARLDLALAENQRLPGLDLY VSPGLDTGNFSVGGTLKFGVAVTLPLAQRTADGLIEQARLKMQKVDLDSLGERQRILTDVIDAVSAVDAAYRRYENATQE TQFARRLEQGERDRFVLGDSTVFLVNQRERGYASARTKQIDSQAEYERALATFRAVTGQF >Mature_459_residues PPALSDPLQGGAAVDVGGPLSLDELLSRVERYHPKLLGAFVARRIASAKLLEKQGAFDPVFRAYSESIEYNSTSARGRFS AAFQNELKVEFPTRSGIKYDFGARYNVGNVKSPLSSTGDTGEYFVSFSVPLLRGLGINEKALAEQQAQLGEPLAQAELVQ TRQELKLKAATSYWDWVAAGRRLTVAREVLDLAQVRLAAINNRAGSGDLPAIDAVEAEQEVRLRRGELVKAERDVQKEAF KLSLYFWQEDGRQGPPPSLARLPAESSPPTAIDPSILAAAQREAIERRPELQRLALQRDSARLDLALAENQRLPGLDLYV SPGLDTGNFSVGGTLKFGVAVTLPLAQRTADGLIEQARLKMQKVDLDSLGERQRILTDVIDAVSAVDAAYRRYENATQET QFARRLEQGERDRFVLGDSTVFLVNQRERGYASARTKQIDSQAEYERALATFRAVTGQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50667; Mature: 50536
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPALSDPLQGGAAVDVGGPLSLDELLSRVERYHPKLLGAFVARRIASAKLLEKQGAFDP CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VFRAYSESIEYNSTSARGRFSAAFQNELKVEFPTRSGIKYDFGARYNVGNVKSPLSSTGD HHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCCC TGEYFVSFSVPLLRGLGINEKALAEQQAQLGEPLAQAELVQTRQELKLKAATSYWDWVAA CCCEEEEECHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRRLTVAREVLDLAQVRLAAINNRAGSGDLPAIDAVEAEQEVRLRRGELVKAERDVQKEA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH FKLSLYFWQEDGRQGPPPSLARLPAESSPPTAIDPSILAAAQREAIERRPELQRLALQRD EEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCC SARLDLALAENQRLPGLDLYVSPGLDTGNFSVGGTLKFGVAVTLPLAQRTADGLIEQARL CCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEECEEEEEHHHHHHHHHHHHHHHH KMQKVDLDSLGERQRILTDVIDAVSAVDAAYRRYENATQETQFARRLEQGERDRFVLGDS HHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEECCC TVFLVNQRERGYASARTKQIDSQAEYERALATFRAVTGQF EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PPALSDPLQGGAAVDVGGPLSLDELLSRVERYHPKLLGAFVARRIASAKLLEKQGAFDP CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VFRAYSESIEYNSTSARGRFSAAFQNELKVEFPTRSGIKYDFGARYNVGNVKSPLSSTGD HHHHHHHHCCCCCCCCCCCCHHHHCCCCEEEECCCCCCEECCCCCCCCCCCCCCCCCCCC TGEYFVSFSVPLLRGLGINEKALAEQQAQLGEPLAQAELVQTRQELKLKAATSYWDWVAA CCCEEEEECHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRRLTVAREVLDLAQVRLAAINNRAGSGDLPAIDAVEAEQEVRLRRGELVKAERDVQKEA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHH FKLSLYFWQEDGRQGPPPSLARLPAESSPPTAIDPSILAAAQREAIERRPELQRLALQRD EEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHCC SARLDLALAENQRLPGLDLYVSPGLDTGNFSVGGTLKFGVAVTLPLAQRTADGLIEQARL CCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEECEEEEEHHHHHHHHHHHHHHHH KMQKVDLDSLGERQRILTDVIDAVSAVDAAYRRYENATQETQFARRLEQGERDRFVLGDS HHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEEECCC TVFLVNQRERGYASARTKQIDSQAEYERALATFRAVTGQF EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA