| Definition | Gloeobacter violaceus PCC 7421 chromosome, complete genome. |
|---|---|
| Accession | NC_005125 |
| Length | 4,659,019 |
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The map label for this gene is ykqA [H]
Identifier: 37519587
GI number: 37519587
Start: 14939
End: 15508
Strand: Reverse
Name: ykqA [H]
Synonym: gll0018
Alternate gene names: 37519587
Gene position: 15508-14939 (Counterclockwise)
Preceding gene: 37519588
Following gene: NA
Centisome position: 0.33
GC content: 64.39
Gene sequence:
>570_bases ATGAGCTTGTACCGCTGCGACCCTGGCGACGGCGAATCGACGTTTTTGTATTTTGCCTACGGCTCGTGCATGTGCCCGGT CGATCTGAAGCGTTCTCTGGGTGAGGATGTGCACGGCCGCGTCGTCGGAGTGGCGCGCCTGTCTGGATACCGGCTCGGTT TTTTTCATTATCTGCAGCGGCGCGATTGCGGTGCCCTCGACATCGTGCTCGACCCGCGCGGCGAAGTCGAAGGGGTACTC TACCGGTTGCCGTGGCACCTGGGGGGCCTGCTCGATGGGCGCGAGGGGGTTGCCCAGGGCGACTACCGCCACGAATTTGT CGAAGTGAGCTGCCGGGGACGGGTGCACCGGGAGGTGCGCACCTATACTGTCGTCGACAAGCTCAGCGAGGAATTGGCGC CCAACGAATGGTACAGCAGCGTCGTTTTGCGCGGAGCGCTCACCTGCGGCCTTTCTGAGTCCTACTGTTGGCGACTGTTC GAGCGGATGTGTTGGCTTGAGGCGCGCCGGCAACCCGCCGACGCAAAATGCCCGCCCCACCGGCGGCAGGGCGGGCGGAT CGCCGTCTAG
Upstream 100 bases:
>100_bases AGGCCATCGAAACAATCTACGGCAAGCCCACCGATTTTTTGTTGTATTCTCGGCGGCCAGTTGCTAGGATTTGTGGAGTT CCAGTCTCCCTGCGCTTGCA
Downstream 100 bases:
>100_bases ACGCTTAGGGCGTCACGATCGTCAGCTGCACATTGTTGAAGCCGAAGTAGGTGCGGCGGGCGCCGGACTCTTTGTAGGAA AAGGTGACGGTGTACTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSLYRCDPGDGESTFLYFAYGSCMCPVDLKRSLGEDVHGRVVGVARLSGYRLGFFHYLQRRDCGALDIVLDPRGEVEGVL YRLPWHLGGLLDGREGVAQGDYRHEFVEVSCRGRVHREVRTYTVVDKLSEELAPNEWYSSVVLRGALTCGLSESYCWRLF ERMCWLEARRQPADAKCPPHRRQGGRIAV
Sequences:
>Translated_189_residues MSLYRCDPGDGESTFLYFAYGSCMCPVDLKRSLGEDVHGRVVGVARLSGYRLGFFHYLQRRDCGALDIVLDPRGEVEGVL YRLPWHLGGLLDGREGVAQGDYRHEFVEVSCRGRVHREVRTYTVVDKLSEELAPNEWYSSVVLRGALTCGLSESYCWRLF ERMCWLEARRQPADAKCPPHRRQGGRIAV >Mature_188_residues SLYRCDPGDGESTFLYFAYGSCMCPVDLKRSLGEDVHGRVVGVARLSGYRLGFFHYLQRRDCGALDIVLDPRGEVEGVLY RLPWHLGGLLDGREGVAQGDYRHEFVEVSCRGRVHREVRTYTVVDKLSEELAPNEWYSSVVLRGALTCGLSESYCWRLFE RMCWLEARRQPADAKCPPHRRQGGRIAV
Specific function: Putative gamma-glutamylcyclotransferase [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamylcyclotransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009288 - InterPro: IPR013024 [H]
Pfam domain/function: PF06094 AIG2 [H]
EC number: NA
Molecular weight: Translated: 21535; Mature: 21404
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLYRCDPGDGESTFLYFAYGSCMCPVDLKRSLGEDVHGRVVGVARLSGYRLGFFHYLQR CCCEECCCCCCCCEEEEEEECCEECCHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHH RDCGALDIVLDPRGEVEGVLYRLPWHLGGLLDGREGVAQGDYRHEFVEVSCRGRVHREVR CCCCEEEEEECCCCCCCEEEEECCHHHCCCCCCCCCCCCCCCHHHEEEEECCCHHHHHHH TYTVVDKLSEELAPNEWYSSVVLRGALTCGLSESYCWRLFERMCWLEARRQPADAKCPPH HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC RRQGGRIAV CCCCCEECC >Mature Secondary Structure SLYRCDPGDGESTFLYFAYGSCMCPVDLKRSLGEDVHGRVVGVARLSGYRLGFFHYLQR CCEECCCCCCCCEEEEEEECCEECCHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHH RDCGALDIVLDPRGEVEGVLYRLPWHLGGLLDGREGVAQGDYRHEFVEVSCRGRVHREVR CCCCEEEEEECCCCCCCEEEEECCHHHCCCCCCCCCCCCCCCHHHEEEEECCCHHHHHHH TYTVVDKLSEELAPNEWYSSVVLRGALTCGLSESYCWRLFERMCWLEARRQPADAKCPPH HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC RRQGGRIAV CCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8002614; 8969500; 9384377 [H]