| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is engB
Identifier: 34499840
GI number: 34499840
Start: 4728641
End: 4729261
Strand: Reverse
Name: engB
Synonym: CV_4385
Alternate gene names: 34499840
Gene position: 4729261-4728641 (Counterclockwise)
Preceding gene: 34499851
Following gene: 34499836
Centisome position: 99.54
GC content: 64.41
Gene sequence:
>621_bases ATGTCGATTTTTCAGAACGCCCGGTTTTATACCACCGTCAACCACATGAAGGACCTGCCGGCCACCCGCGCCGAGGTCGC CTTCGTCGGCCGCTCCAACGCCGGCAAGTCCAGCGCGATCAACACGCTGGCCAACCGCACCCGGCTGGCCTACGTGTCCA AGACGCCGGGACGCACCCAGCACATCAACTTTTTCGAGCTGGGCGACGAGTGCTTCCTGGTCGACCTGCCCGGCTACGGC TACGCCGAAGTGCCGGAGGCGGTGCGCGCCCACTGGGTGGAGCTGCTCGGCCGCTACCTGCAGACCCGGCAGAGCCTGAT CGGCCTCTTGTTGATTATGGACGCTCGCCACCCGTTGAAGGAGTTGGATCGCAGGATGCTGGAATTCTTCCGCGTCGCCG GCCGTCCGGTGCACATCCTGTTGTCCAAGGCCGACAAGCTGTCGCGCCAGGAGCAGAACAAGGTGCTGGCCGAGGTGAAG CGGGAGCTCGCCGACTATCCGTCGGTCAGCGTGCAGATGTTCTCCAGCCTGAAGAAGACCGGCGTGGACGTGGTGGAGCA GGTGGTGAAGGGCTGGTTCGACGCCTTGCCGCCGCAGGACGACGGCATGGCGGAACTTTGA
Upstream 100 bases:
>100_bases CGTCTCATGGTCGCTCCTTTAGGGTGAGGCCCTAAAATATCTGTAAAAGTAGCAATTCCAAACCTGTTATTCTATACCAA TTGATTTCAACCTTACTACC
Downstream 100 bases:
>100_bases GCGGCGGGCTCCGCCTAAGCTTGCAGGTGCATCGCACCTCCCGCTTGGCTCCCTGAGCGGGGCCTGAATCGTTGCTATCC AGGCTTTGCCCCGGCTTTCT
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSIFQNARFYTTVNHMKDLPATRAEVAFVGRSNAGKSSAINTLANRTRLAYVSKTPGRTQHINFFELGDECFLVDLPGYG YAEVPEAVRAHWVELLGRYLQTRQSLIGLLLIMDARHPLKELDRRMLEFFRVAGRPVHILLSKADKLSRQEQNKVLAEVK RELADYPSVSVQMFSSLKKTGVDVVEQVVKGWFDALPPQDDGMAEL
Sequences:
>Translated_206_residues MSIFQNARFYTTVNHMKDLPATRAEVAFVGRSNAGKSSAINTLANRTRLAYVSKTPGRTQHINFFELGDECFLVDLPGYG YAEVPEAVRAHWVELLGRYLQTRQSLIGLLLIMDARHPLKELDRRMLEFFRVAGRPVHILLSKADKLSRQEQNKVLAEVK RELADYPSVSVQMFSSLKKTGVDVVEQVVKGWFDALPPQDDGMAEL >Mature_205_residues SIFQNARFYTTVNHMKDLPATRAEVAFVGRSNAGKSSAINTLANRTRLAYVSKTPGRTQHINFFELGDECFLVDLPGYGY AEVPEAVRAHWVELLGRYLQTRQSLIGLLLIMDARHPLKELDRRMLEFFRVAGRPVHILLSKADKLSRQEQNKVLAEVKR ELADYPSVSVQMFSSLKKTGVDVVEQVVKGWFDALPPQDDGMAEL
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=152, Percent_Identity=35.5263157894737, Blast_Score=86, Evalue=3e-17, Organism=Escherichia coli, GI145693205, Length=197, Percent_Identity=51.2690355329949, Blast_Score=189, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6320543, Length=182, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_CHRVO (Q7NPV7)
Other databases:
- EMBL: AE016825 - RefSeq: NP_904055.1 - HSSP: P0A6P7 - ProteinModelPortal: Q7NPV7 - SMR: Q7NPV7 - GeneID: 2549588 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_4385 - NMPDR: fig|243365.1.peg.4385 - HOGENOM: HBG447097 - OMA: THFVTSA - PhylomeDB: Q7NPV7 - ProtClustDB: PRK00454 - BioCyc: CVIO243365:CV_4385-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 23294; Mature: 23163
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFQNARFYTTVNHMKDLPATRAEVAFVGRSNAGKSSAINTLANRTRLAYVSKTPGRTQ CCCCCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCCHHHHHHHHHHHHEEEEECCCCCCE HINFFELGDECFLVDLPGYGYAEVPEAVRAHWVELLGRYLQTRQSLIGLLLIMDARHPLK ECCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ELDRRMLEFFRVAGRPVHILLSKADKLSRQEQNKVLAEVKRELADYPSVSVQMFSSLKKT HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC GVDVVEQVVKGWFDALPPQDDGMAEL CHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure SIFQNARFYTTVNHMKDLPATRAEVAFVGRSNAGKSSAINTLANRTRLAYVSKTPGRTQ CCCCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCCHHHHHHHHHHHHEEEEECCCCCCE HINFFELGDECFLVDLPGYGYAEVPEAVRAHWVELLGRYLQTRQSLIGLLLIMDARHPLK ECCCEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ELDRRMLEFFRVAGRPVHILLSKADKLSRQEQNKVLAEVKRELADYPSVSVQMFSSLKKT HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC GVDVVEQVVKGWFDALPPQDDGMAEL CHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782