| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499789
Identifier: 34499789
GI number: 34499789
Start: 4674672
End: 4675256
Strand: Direct
Name: 34499789
Synonym: CV_4334
Alternate gene names: NA
Gene position: 4674672-4675256 (Clockwise)
Preceding gene: 34499788
Following gene: 34499808
Centisome position: 98.39
GC content: 66.15
Gene sequence:
>585_bases ATGGATCAGCAAACTCTGCAGGAAAATCGGGAAAGGGAATGGGTCAGGCGGCTGTTCGAGCAAAAGGGCATCGCGCCGCT TGACGTCAGGTCGCTGAAATGTCCGGCCCCCGACGTCGGCGTGCAGCTGTCGGATGGCCGCCGCTTAGCGATCGAGGTGA CCGAAGTGCTGTCGGGCGAGCACACCCGCCGCCATGCCAGGAAAAAGGAAATCCAGCAGGCGCCCGGCGGCATAGACGCG ATCTTCACGCGGCCGGCCAGCGCGCTGGACGTCGCCTGCCGGATCGAAGCCAAGGTGGGCAAGGACTACCACGTGCCGCA CGGACACCAGCTGCAGCTGCTGCTCGCGGCCGGCACGGTCGAACACGGCGGCGGCAGCACCTCGCTGCTGCTCTATCTCT CGGTGCAGGAGCTGAACCAGCTGACGCATGACATGCTGGAACGCTCGCGCTACCAGCACGCCTATCTCCACCTGCAGCTG GGCAGCGGCCTGTACGAATGGACCCGCCGCGACGGCTGGCGCGAAATCCATACGCCGGGCCTGGACCGCGCGCTGGAAAC GGAGATGCGCCAGGCCGGACGTTAG
Upstream 100 bases:
>100_bases GGCGATCGCCTCTTTGCGCGGCGCGCGCTGAGCCCGATGACGGACGCCCGCGGCGGATGTTCTAGAATGAAGCATCTGTC TTGCATTCGCGTAGGCGCCG
Downstream 100 bases:
>100_bases AACCCGTTCGCGCTTTTTCCCGAACAGCTCTCAGGCCCGCCAGCGGCCGCTCTTGCCGCCATCCTTCTCCAGCAGACGCA CCCCGGTGATCTCCATGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MDQQTLQENREREWVRRLFEQKGIAPLDVRSLKCPAPDVGVQLSDGRRLAIEVTEVLSGEHTRRHARKKEIQQAPGGIDA IFTRPASALDVACRIEAKVGKDYHVPHGHQLQLLLAAGTVEHGGGSTSLLLYLSVQELNQLTHDMLERSRYQHAYLHLQL GSGLYEWTRRDGWREIHTPGLDRALETEMRQAGR
Sequences:
>Translated_194_residues MDQQTLQENREREWVRRLFEQKGIAPLDVRSLKCPAPDVGVQLSDGRRLAIEVTEVLSGEHTRRHARKKEIQQAPGGIDA IFTRPASALDVACRIEAKVGKDYHVPHGHQLQLLLAAGTVEHGGGSTSLLLYLSVQELNQLTHDMLERSRYQHAYLHLQL GSGLYEWTRRDGWREIHTPGLDRALETEMRQAGR >Mature_194_residues MDQQTLQENREREWVRRLFEQKGIAPLDVRSLKCPAPDVGVQLSDGRRLAIEVTEVLSGEHTRRHARKKEIQQAPGGIDA IFTRPASALDVACRIEAKVGKDYHVPHGHQLQLLLAAGTVEHGGGSTSLLLYLSVQELNQLTHDMLERSRYQHAYLHLQL GSGLYEWTRRDGWREIHTPGLDRALETEMRQAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22012; Mature: 22012
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQQTLQENREREWVRRLFEQKGIAPLDVRSLKCPAPDVGVQLSDGRRLAIEVTEVLSGE CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEHHHHHCCH HTRRHARKKEIQQAPGGIDAIFTRPASALDVACRIEAKVGKDYHVPHGHQLQLLLAAGTV HHHHHHHHHHHHHCCCCCEEECCCCCHHHHEEEEEEEECCCCCCCCCCCEEEEEEEECCE EHGGGSTSLLLYLSVQELNQLTHDMLERSRYQHAYLHLQLGSGLYEWTRRDGWREIHTPG ECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHCCCCCCCCCCC LDRALETEMRQAGR CHHHHHHHHHHCCC >Mature Secondary Structure MDQQTLQENREREWVRRLFEQKGIAPLDVRSLKCPAPDVGVQLSDGRRLAIEVTEVLSGE CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEEEEHHHHHCCH HTRRHARKKEIQQAPGGIDAIFTRPASALDVACRIEAKVGKDYHVPHGHQLQLLLAAGTV HHHHHHHHHHHHHCCCCCEEECCCCCHHHHEEEEEEEECCCCCCCCCCCEEEEEEEECCE EHGGGSTSLLLYLSVQELNQLTHDMLERSRYQHAYLHLQLGSGLYEWTRRDGWREIHTPG ECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHCCCCCCCCCCC LDRALETEMRQAGR CHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA