Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080

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The map label for this gene is 34499788

Identifier: 34499788

GI number: 34499788

Start: 4674096

End: 4674602

Strand: Direct

Name: 34499788

Synonym: CV_4333

Alternate gene names: NA

Gene position: 4674096-4674602 (Clockwise)

Preceding gene: 34499787

Following gene: 34499789

Centisome position: 98.38

GC content: 66.67

Gene sequence:

>507_bases
TTGAAAGCCATCGCAACCCTGCCGGCGCTGCTGGCGCTGTGCCTGAGCCTGCCCGCTCTGGCCGGCAACGACAGGATCAA
CAAGAACATCGAATTCGAGGAAGAACAGCCGTGGACCGAGCAGGACTACGCGCTGCCCGATTACCCGCAGACGCCGGACT
GGATAGAAGTGAAGCCGGACTGGCTGCAGCAAAACCGCTTCTTCGTCGACGCCAGGACGCTGAGCGTGGCCGGCGACGGC
GTGGTGCGCTTCGTCAGCCGGGTGCTGACGCCCGGCGGCGTGGAGAACCTCAGCGTCGAAGGCATCCAATGCAAGGCGAA
CCAGTACAAGGCCTACGGCTTCGGCGACAGCGTCAACCACCGCTGGATCGCGGCGATGCGGCCGCAATGGCAGGCGATCA
ACAGCACCGACAAGCTCAGGCGGGAGCTGCGCGAGCTGATGTGCCCGTCGCATGGCGCGCCGCGCGACGCGGCCCAGGCG
ATCGCCTCTTTGCGCGGCGCGCGCTGA

Upstream 100 bases:

>100_bases
TCGGCTTTTCCGAACTGAGCTGGGGCCTGGCCGGACGCGAGACCGGCCGCCGCCACTACAACCTGCGCGCCGGCCAGGCG
CGCTGACGGAGCATCCGCAT

Downstream 100 bases:

>100_bases
GCCCGATGACGGACGCCCGCGGCGGATGTTCTAGAATGAAGCATCTGTCTTGCATTCGCGTAGGCGCCGATGGATCAGCA
AACTCTGCAGGAAAATCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Periplasmic Protein

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MKAIATLPALLALCLSLPALAGNDRINKNIEFEEEQPWTEQDYALPDYPQTPDWIEVKPDWLQQNRFFVDARTLSVAGDG
VVRFVSRVLTPGGVENLSVEGIQCKANQYKAYGFGDSVNHRWIAAMRPQWQAINSTDKLRRELRELMCPSHGAPRDAAQA
IASLRGAR

Sequences:

>Translated_168_residues
MKAIATLPALLALCLSLPALAGNDRINKNIEFEEEQPWTEQDYALPDYPQTPDWIEVKPDWLQQNRFFVDARTLSVAGDG
VVRFVSRVLTPGGVENLSVEGIQCKANQYKAYGFGDSVNHRWIAAMRPQWQAINSTDKLRRELRELMCPSHGAPRDAAQA
IASLRGAR
>Mature_168_residues
MKAIATLPALLALCLSLPALAGNDRINKNIEFEEEQPWTEQDYALPDYPQTPDWIEVKPDWLQQNRFFVDARTLSVAGDG
VVRFVSRVLTPGGVENLSVEGIQCKANQYKAYGFGDSVNHRWIAAMRPQWQAINSTDKLRRELRELMCPSHGAPRDAAQA
IASLRGAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18822; Mature: 18822

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAIATLPALLALCLSLPALAGNDRINKNIEFEEEQPWTEQDYALPDYPQTPDWIEVKPD
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHH
WLQQNRFFVDARTLSVAGDGVVRFVSRVLTPGGVENLSVEGIQCKANQYKAYGFGDSVNH
HHCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCCCCCEECCEEECCCCEEEECCCCCCCC
RWIAAMRPQWQAINSTDKLRRELRELMCPSHGAPRDAAQAIASLRGAR
EEEEECCCCCHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKAIATLPALLALCLSLPALAGNDRINKNIEFEEEQPWTEQDYALPDYPQTPDWIEVKPD
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHH
WLQQNRFFVDARTLSVAGDGVVRFVSRVLTPGGVENLSVEGIQCKANQYKAYGFGDSVNH
HHCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCCCCCEECCEEECCCCEEEECCCCCCCC
RWIAAMRPQWQAINSTDKLRRELRELMCPSHGAPRDAAQAIASLRGAR
EEEEECCCCCHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA