| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
Click here to switch to the map view.
The map label for this gene is 34499788
Identifier: 34499788
GI number: 34499788
Start: 4674096
End: 4674602
Strand: Direct
Name: 34499788
Synonym: CV_4333
Alternate gene names: NA
Gene position: 4674096-4674602 (Clockwise)
Preceding gene: 34499787
Following gene: 34499789
Centisome position: 98.38
GC content: 66.67
Gene sequence:
>507_bases TTGAAAGCCATCGCAACCCTGCCGGCGCTGCTGGCGCTGTGCCTGAGCCTGCCCGCTCTGGCCGGCAACGACAGGATCAA CAAGAACATCGAATTCGAGGAAGAACAGCCGTGGACCGAGCAGGACTACGCGCTGCCCGATTACCCGCAGACGCCGGACT GGATAGAAGTGAAGCCGGACTGGCTGCAGCAAAACCGCTTCTTCGTCGACGCCAGGACGCTGAGCGTGGCCGGCGACGGC GTGGTGCGCTTCGTCAGCCGGGTGCTGACGCCCGGCGGCGTGGAGAACCTCAGCGTCGAAGGCATCCAATGCAAGGCGAA CCAGTACAAGGCCTACGGCTTCGGCGACAGCGTCAACCACCGCTGGATCGCGGCGATGCGGCCGCAATGGCAGGCGATCA ACAGCACCGACAAGCTCAGGCGGGAGCTGCGCGAGCTGATGTGCCCGTCGCATGGCGCGCCGCGCGACGCGGCCCAGGCG ATCGCCTCTTTGCGCGGCGCGCGCTGA
Upstream 100 bases:
>100_bases TCGGCTTTTCCGAACTGAGCTGGGGCCTGGCCGGACGCGAGACCGGCCGCCGCCACTACAACCTGCGCGCCGGCCAGGCG CGCTGACGGAGCATCCGCAT
Downstream 100 bases:
>100_bases GCCCGATGACGGACGCCCGCGGCGGATGTTCTAGAATGAAGCATCTGTCTTGCATTCGCGTAGGCGCCGATGGATCAGCA AACTCTGCAGGAAAATCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: Periplasmic Protein
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MKAIATLPALLALCLSLPALAGNDRINKNIEFEEEQPWTEQDYALPDYPQTPDWIEVKPDWLQQNRFFVDARTLSVAGDG VVRFVSRVLTPGGVENLSVEGIQCKANQYKAYGFGDSVNHRWIAAMRPQWQAINSTDKLRRELRELMCPSHGAPRDAAQA IASLRGAR
Sequences:
>Translated_168_residues MKAIATLPALLALCLSLPALAGNDRINKNIEFEEEQPWTEQDYALPDYPQTPDWIEVKPDWLQQNRFFVDARTLSVAGDG VVRFVSRVLTPGGVENLSVEGIQCKANQYKAYGFGDSVNHRWIAAMRPQWQAINSTDKLRRELRELMCPSHGAPRDAAQA IASLRGAR >Mature_168_residues MKAIATLPALLALCLSLPALAGNDRINKNIEFEEEQPWTEQDYALPDYPQTPDWIEVKPDWLQQNRFFVDARTLSVAGDG VVRFVSRVLTPGGVENLSVEGIQCKANQYKAYGFGDSVNHRWIAAMRPQWQAINSTDKLRRELRELMCPSHGAPRDAAQA IASLRGAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18822; Mature: 18822
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAIATLPALLALCLSLPALAGNDRINKNIEFEEEQPWTEQDYALPDYPQTPDWIEVKPD CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHH WLQQNRFFVDARTLSVAGDGVVRFVSRVLTPGGVENLSVEGIQCKANQYKAYGFGDSVNH HHCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCCCCCEECCEEECCCCEEEECCCCCCCC RWIAAMRPQWQAINSTDKLRRELRELMCPSHGAPRDAAQAIASLRGAR EEEEECCCCCHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MKAIATLPALLALCLSLPALAGNDRINKNIEFEEEQPWTEQDYALPDYPQTPDWIEVKPD CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHH WLQQNRFFVDARTLSVAGDGVVRFVSRVLTPGGVENLSVEGIQCKANQYKAYGFGDSVNH HHCCCEEEEEEEEEEECCCHHHHHHHHHCCCCCCCCCEECCEEECCCCEEEECCCCCCCC RWIAAMRPQWQAINSTDKLRRELRELMCPSHGAPRDAAQAIASLRGAR EEEEECCCCCHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA