| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499787
Identifier: 34499787
GI number: 34499787
Start: 4673317
End: 4674081
Strand: Direct
Name: 34499787
Synonym: CV_4332
Alternate gene names: NA
Gene position: 4673317-4674081 (Clockwise)
Preceding gene: 34499776
Following gene: 34499788
Centisome position: 98.36
GC content: 70.07
Gene sequence:
>765_bases ATGTGCATCATCGCTTTCGCTTACAAAACGCCGGGCATGGGCCAGCTGGTACTCTTGGCCAACCGCGACGAATACTACGC CCGCCCCGCCGAGCCGCTGGACTGGTGGCCGGAATTCCCCAACACCCTGGGCGGCCGCGACCAGCAATCCGGCGGCAGCT GGCTGATGGTGGACGGGCGCAATCGCATCGCCGCCGTCACCAACTTCCGCGACGGTTTCCCGCCCAAGGCGGAGCGCTCG CGCGGCGAGCTGGTGCGGCGCTTCGTCACCGGCGACGACGACCCGTTCGCCTTCGCCGACTGGCTGCGCGAGGAATGCCA CCGCTACGCGCCGTTCAACCTGCTGTTCGGCACCACCTCGGACCTGTTCTTCTTCCACAGCCCCGGCCGGCAGATCGCGC GCGTGACGCCCGGCATCCACACGCTGTCCAACGCCACGCTGGACACGCCGTGGTTCAAGAGCCAGCGGCTGGCGGAATAC CTGGGCGAGTTCGGCCGGCCGCCGACCGAGGAGCAGGCCTACGCCGCGCTGTCCGACCCGACGCCGGCCGGCCCCGGCCA CCTGCCCAATACCCGCATCGGCCTGGCGCTGGAAAAGACGCTGTCGCCGATCTTCATCCAGGGCCGCGACTACGGCACCC GCGCGTCGATGCTGCTGACGGTGTCCAGCCGCGGCGACATCGGCTTTTCCGAACTGAGCTGGGGCCTGGCCGGACGCGAG ACCGGCCGCCGCCACTACAACCTGCGCGCCGGCCAGGCGCGCTGA
Upstream 100 bases:
>100_bases GTTACAATGAATCACATGGCGGCCGGCCGCGCAAACCGGCGGGCCGCAGCCGTATAGTTTACGCCAGTCGTCAAGCCTTA CCCAAATCGGTCACCGCAAT
Downstream 100 bases:
>100_bases CGGAGCATCCGCATTTGAAAGCCATCGCAACCCTGCCGGCGCTGCTGGCGCTGTGCCTGAGCCTGCCCGCTCTGGCCGGC AACGACAGGATCAACAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 254
Protein sequence:
>254_residues MCIIAFAYKTPGMGQLVLLANRDEYYARPAEPLDWWPEFPNTLGGRDQQSGGSWLMVDGRNRIAAVTNFRDGFPPKAERS RGELVRRFVTGDDDPFAFADWLREECHRYAPFNLLFGTTSDLFFFHSPGRQIARVTPGIHTLSNATLDTPWFKSQRLAEY LGEFGRPPTEEQAYAALSDPTPAGPGHLPNTRIGLALEKTLSPIFIQGRDYGTRASMLLTVSSRGDIGFSELSWGLAGRE TGRRHYNLRAGQAR
Sequences:
>Translated_254_residues MCIIAFAYKTPGMGQLVLLANRDEYYARPAEPLDWWPEFPNTLGGRDQQSGGSWLMVDGRNRIAAVTNFRDGFPPKAERS RGELVRRFVTGDDDPFAFADWLREECHRYAPFNLLFGTTSDLFFFHSPGRQIARVTPGIHTLSNATLDTPWFKSQRLAEY LGEFGRPPTEEQAYAALSDPTPAGPGHLPNTRIGLALEKTLSPIFIQGRDYGTRASMLLTVSSRGDIGFSELSWGLAGRE TGRRHYNLRAGQAR >Mature_254_residues MCIIAFAYKTPGMGQLVLLANRDEYYARPAEPLDWWPEFPNTLGGRDQQSGGSWLMVDGRNRIAAVTNFRDGFPPKAERS RGELVRRFVTGDDDPFAFADWLREECHRYAPFNLLFGTTSDLFFFHSPGRQIARVTPGIHTLSNATLDTPWFKSQRLAEY LGEFGRPPTEEQAYAALSDPTPAGPGHLPNTRIGLALEKTLSPIFIQGRDYGTRASMLLTVSSRGDIGFSELSWGLAGRE TGRRHYNLRAGQAR
Specific function: Unknown
COG id: COG3332
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI190570176, Length=257, Percent_Identity=31.5175097276265, Blast_Score=105, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28429; Mature: 28429
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCIIAFAYKTPGMGQLVLLANRDEYYARPAEPLDWWPEFPNTLGGRDQQSGGSWLMVDGR CEEEEEEECCCCCCEEEEEECCCHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEECC NRIAAVTNFRDGFPPKAERSRGELVRRFVTGDDDPFAFADWLREECHRYAPFNLLFGTTS CCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCC DLFFFHSPGRQIARVTPGIHTLSNATLDTPWFKSQRLAEYLGEFGRPPTEEQAYAALSDP CEEEEECCCCEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHEEEECCC TPAGPGHLPNTRIGLALEKTLSPIFIQGRDYGTRASMLLTVSSRGDIGFSELSWGLAGRE CCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCHHHHHCCCCCCC TGRRHYNLRAGQAR CCCEEEEECCCCCC >Mature Secondary Structure MCIIAFAYKTPGMGQLVLLANRDEYYARPAEPLDWWPEFPNTLGGRDQQSGGSWLMVDGR CEEEEEEECCCCCCEEEEEECCCHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEECC NRIAAVTNFRDGFPPKAERSRGELVRRFVTGDDDPFAFADWLREECHRYAPFNLLFGTTS CCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCC DLFFFHSPGRQIARVTPGIHTLSNATLDTPWFKSQRLAEYLGEFGRPPTEEQAYAALSDP CEEEEECCCCEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHEEEECCC TPAGPGHLPNTRIGLALEKTLSPIFIQGRDYGTRASMLLTVSSRGDIGFSELSWGLAGRE CCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEEECCCCCCHHHHHCCCCCCC TGRRHYNLRAGQAR CCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA