| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499776
Identifier: 34499776
GI number: 34499776
Start: 4662961
End: 4663884
Strand: Direct
Name: 34499776
Synonym: CV_4321
Alternate gene names: NA
Gene position: 4662961-4663884 (Clockwise)
Preceding gene: 34499775
Following gene: 34499787
Centisome position: 98.15
GC content: 72.29
Gene sequence:
>924_bases ATGAGCGCCCGCCATCCGCACGCGGCCTGGGCGCGCGACTACCAACCGTCCGACGCCGCCGACATCAGCGCGCTGTTCCG CGCCGTCTACGGCGACCACTACGTCTACGCCGACGTCTACCTGCCGAGCCAGATCCAGCAGCGCAACGCCAGCGGACAAT GGCGCTCGGCGGTGGCGGTGCGCGACGGCCGGCTGCTGGGCCACGCGACGCTGTGGCTGGACCCGGCGCGTCCGGGCCAA GCCGAGCTGGCGCTGAACGCAGTGCACCCGGACGCCCGCGGCCAGGGCATCGCCAGCCTGCTGGGCCGGCACCTGCGCGC GGCGGCCGCCGACCTCGGCATCCCGCTGTTGACCATCAAGCAGGTGTGCTCGCATCCGCAAAGCCAGTACGTGGCGCGCG CGCTGGGCTTTCACAACACCGCGCTGCTGCTGGACTACGTCGACTCGCCGTTCGGCAAGCCGGAGCCGGAAAGCATCGTG TTCGGCTGCCTGCCGCTGAAGCCCCGGCCGCTGCCGAAACTGGCGTGGCCGCCGGAGTGGGAGGCATGGCTGGCGCCGCT GCGCCTGGCATTCGGAGAAAAAGAAGGCTCGCCGGCCAGCCTCGGCCTGCCCGGCCTGGCGCTGGCGCGCCACGGCCAGC GGCTGGAACTGGCCGCGCAGCAGCCCACCGAGGCGCGTCTGGCCGAGATCGCCGCGCTGCCGGCCGGCCAGCTGATCTAT CTGAAACTGCCGGCCGCGGCGGAAACGCTGGCGCGGCGACGCCAGCTGGAAAGCGCCGGCTTCCGTTTCGGCGGCCTGTT GCCGGCGGCAAGCGGCGGCTGGCAGCTGCTATGGCTGCGCGGCCTGTCGGGGCAGGACATCCGCTTCTGCGACGAGCAGG CCGAACGGCTGTACCGATTGGGGCGAAACCCGCAAAGCGCTTGA
Upstream 100 bases:
>100_bases TGACGCAAACCACGCCGGAAGCGATGCGCACCCATCCCCGCTCCGGCAAGCTGCTGCGGGTGGTGGACCGGCGCGACTAC CAGCCGGCGGAGGCGACGGC
Downstream 100 bases:
>100_bases GGCGCTGCGCAAAGCGGATGCTTCGGCCCCAAGGCCGAGCCCGGCGCAACGCCGGATCAGGGGTTTGGCTCGCGGCCTGC CAGCGGCTCCAGCTTGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSARHPHAAWARDYQPSDAADISALFRAVYGDHYVYADVYLPSQIQQRNASGQWRSAVAVRDGRLLGHATLWLDPARPGQ AELALNAVHPDARGQGIASLLGRHLRAAAADLGIPLLTIKQVCSHPQSQYVARALGFHNTALLLDYVDSPFGKPEPESIV FGCLPLKPRPLPKLAWPPEWEAWLAPLRLAFGEKEGSPASLGLPGLALARHGQRLELAAQQPTEARLAEIAALPAGQLIY LKLPAAAETLARRRQLESAGFRFGGLLPAASGGWQLLWLRGLSGQDIRFCDEQAERLYRLGRNPQSA
Sequences:
>Translated_307_residues MSARHPHAAWARDYQPSDAADISALFRAVYGDHYVYADVYLPSQIQQRNASGQWRSAVAVRDGRLLGHATLWLDPARPGQ AELALNAVHPDARGQGIASLLGRHLRAAAADLGIPLLTIKQVCSHPQSQYVARALGFHNTALLLDYVDSPFGKPEPESIV FGCLPLKPRPLPKLAWPPEWEAWLAPLRLAFGEKEGSPASLGLPGLALARHGQRLELAAQQPTEARLAEIAALPAGQLIY LKLPAAAETLARRRQLESAGFRFGGLLPAASGGWQLLWLRGLSGQDIRFCDEQAERLYRLGRNPQSA >Mature_306_residues SARHPHAAWARDYQPSDAADISALFRAVYGDHYVYADVYLPSQIQQRNASGQWRSAVAVRDGRLLGHATLWLDPARPGQA ELALNAVHPDARGQGIASLLGRHLRAAAADLGIPLLTIKQVCSHPQSQYVARALGFHNTALLLDYVDSPFGKPEPESIVF GCLPLKPRPLPKLAWPPEWEAWLAPLRLAFGEKEGSPASLGLPGLALARHGQRLELAAQQPTEARLAEIAALPAGQLIYL KLPAAAETLARRRQLESAGFRFGGLLPAASGGWQLLWLRGLSGQDIRFCDEQAERLYRLGRNPQSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33449; Mature: 33317
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARHPHAAWARDYQPSDAADISALFRAVYGDHYVYADVYLPSQIQQRNASGQWRSAVAV CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHCCCCCCHHHEEEE RDGRLLGHATLWLDPARPGQAELALNAVHPDARGQGIASLLGRHLRAAAADLGIPLLTIK ECCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH QVCSHPQSQYVARALGFHNTALLLDYVDSPFGKPEPESIVFGCLPLKPRPLPKLAWPPEW HHHCCCHHHHHHHHHCCCCCEEEEEHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCH EAWLAPLRLAFGEKEGSPASLGLPGLALARHGQRLELAAQQPTEARLAEIAALPAGQLIY HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCEEE LKLPAAAETLARRRQLESAGFRFGGLLPAASGGWQLLWLRGLSGQDIRFCDEQAERLYRL EECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH GRNPQSA CCCCCCC >Mature Secondary Structure SARHPHAAWARDYQPSDAADISALFRAVYGDHYVYADVYLPSQIQQRNASGQWRSAVAV CCCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCHHHHHCCCCCCHHHEEEE RDGRLLGHATLWLDPARPGQAELALNAVHPDARGQGIASLLGRHLRAAAADLGIPLLTIK ECCEEEEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH QVCSHPQSQYVARALGFHNTALLLDYVDSPFGKPEPESIVFGCLPLKPRPLPKLAWPPEW HHHCCCHHHHHHHHHCCCCCEEEEEHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCH EAWLAPLRLAFGEKEGSPASLGLPGLALARHGQRLELAAQQPTEARLAEIAALPAGQLIY HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCEEE LKLPAAAETLARRRQLESAGFRFGGLLPAASGGWQLLWLRGLSGQDIRFCDEQAERLYRL EECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHH GRNPQSA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA