| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499775
Identifier: 34499775
GI number: 34499775
Start: 4661702
End: 4662964
Strand: Direct
Name: 34499775
Synonym: CV_4320
Alternate gene names: NA
Gene position: 4661702-4662964 (Clockwise)
Preceding gene: 34499774
Following gene: 34499776
Centisome position: 98.12
GC content: 71.34
Gene sequence:
>1263_bases ATGAATCCGAAACTGATATCGCTGGTCGAACACGCCCGCAACCATTCGCCGCACTACAACGCGCTTTACCACGGCTTGCC CGCCGAAGGCTGGCGGCTGTCCGACCTGCCCCCGGTCGATCCCGCCGCCTACTGGCGGGATTCGCAGGACCTGTCGCGCT GGCCGGCGCTGACCGCCGCCCCCGAGGACGGCCACGTGTTCAAAACCGGCGGCTCTACCGGCGACGGCAAGCTGTCGGTG TTCAGCCGCGCGGAATGGCAGGCCTTCGTCGCCGCCTTCGGCGCCGGCCTGGCGCGCCAGCTGCGCCCAGGCGACCGCGT CGCCAACCTGTTCTTCGCCGGCGATCTCTACACCAGCCTGCTGTTCATCCACGGCGCGCTGTCGCATGCGCCGGTGCCGG TGCTGGAATTCCCGTTCACCTGCAATGTCGACAACGACGCGCTCGCCGGGGCGATTAGCCGCCACCGGATCAACGTGCTG GCCGGCGTGCCGGCGCAGCTGCTGCGCTTCGCCCATTACCTGGAGGCGCGCGCGCAGGCGCTGGCCGAGGTGGAAACCGT GCTTTACGGCGGCGAAAGCCTGTTCGGCGAACAGATCGCGCTGCTGAAGCAGGTGTTCCCGCTGGCCCGCGTCGGATCGG TCGGCTGCGCCAGCGTGGACGCCGGCCTGATCGGCTACGCCGACCCGGACTGCGCGCATGGCGAGCACCGGGTGTTCGAT GAGGACAGCGTGGTCGAGATCGTCGACGAGGACAGCGGCGAGCCGATAGACGAGCCCGGCCGGCGCGGCCTGCTGCTGGT GACCAACCTGCAGCGCCGGCTGATGCCGGTGATACGCTATCCCAGCGGCGACCTGGCCTGCTGGCGCGAGCCGCCCGGCC CCAACCGCAAGTTCGCGCTGCAGGGCCGGGCCGGCAACGGCCACCGCGTGCGCGTCGGCACGCTGTCGCTGTTTCCGGAG GAGCTGGGCCGCGCGCTGGGCGAGCCGCACGAGCTGCTGGGCTGGCAGCTGGATATTTCGCGCGAGGGCGGCCGGGACCG GCTGGAGCTGCTGCTGGCGGCGCGCGCGCCGCTGGACCTGGAGAAGATGCGGCAAGCCCTGCTGGCCGGCCAGCCGGCGA TCGCCGAGCTGTGCGAGACGGCGCGGCTGAGCCTGGCGCTGACGCAAACCACGCCGGAAGCGATGCGCACCCATCCCCGC TCCGGCAAGCTGCTGCGGGTGGTGGACCGGCGCGACTACCAGCCGGCGGAGGCGACGGCATGA
Upstream 100 bases:
>100_bases ATTCCGCCGCCATCCGCACAGCGGCAAGACCCCGCTGGTGCTGGACCTGAGACGATGAAACCCGGCCGGCGCCGCGGCGC CGGCATGTACACACATAATC
Downstream 100 bases:
>100_bases GCGCCCGCCATCCGCACGCGGCCTGGGCGCGCGACTACCAACCGTCCGACGCCGCCGACATCAGCGCGCTGTTCCGCGCC GTCTACGGCGACCACTACGT
Product: hypothetical protein
Products: NA
Alternate protein names: Long-Chain-Fatty-Acyl-CoA Reductase; Acyl-CoA Reductase; Two-Component Fusion Protein; Phenylacetate-CoA Ligase
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MNPKLISLVEHARNHSPHYNALYHGLPAEGWRLSDLPPVDPAAYWRDSQDLSRWPALTAAPEDGHVFKTGGSTGDGKLSV FSRAEWQAFVAAFGAGLARQLRPGDRVANLFFAGDLYTSLLFIHGALSHAPVPVLEFPFTCNVDNDALAGAISRHRINVL AGVPAQLLRFAHYLEARAQALAEVETVLYGGESLFGEQIALLKQVFPLARVGSVGCASVDAGLIGYADPDCAHGEHRVFD EDSVVEIVDEDSGEPIDEPGRRGLLLVTNLQRRLMPVIRYPSGDLACWREPPGPNRKFALQGRAGNGHRVRVGTLSLFPE ELGRALGEPHELLGWQLDISREGGRDRLELLLAARAPLDLEKMRQALLAGQPAIAELCETARLSLALTQTTPEAMRTHPR SGKLLRVVDRRDYQPAEATA
Sequences:
>Translated_420_residues MNPKLISLVEHARNHSPHYNALYHGLPAEGWRLSDLPPVDPAAYWRDSQDLSRWPALTAAPEDGHVFKTGGSTGDGKLSV FSRAEWQAFVAAFGAGLARQLRPGDRVANLFFAGDLYTSLLFIHGALSHAPVPVLEFPFTCNVDNDALAGAISRHRINVL AGVPAQLLRFAHYLEARAQALAEVETVLYGGESLFGEQIALLKQVFPLARVGSVGCASVDAGLIGYADPDCAHGEHRVFD EDSVVEIVDEDSGEPIDEPGRRGLLLVTNLQRRLMPVIRYPSGDLACWREPPGPNRKFALQGRAGNGHRVRVGTLSLFPE ELGRALGEPHELLGWQLDISREGGRDRLELLLAARAPLDLEKMRQALLAGQPAIAELCETARLSLALTQTTPEAMRTHPR SGKLLRVVDRRDYQPAEATA >Mature_420_residues MNPKLISLVEHARNHSPHYNALYHGLPAEGWRLSDLPPVDPAAYWRDSQDLSRWPALTAAPEDGHVFKTGGSTGDGKLSV FSRAEWQAFVAAFGAGLARQLRPGDRVANLFFAGDLYTSLLFIHGALSHAPVPVLEFPFTCNVDNDALAGAISRHRINVL AGVPAQLLRFAHYLEARAQALAEVETVLYGGESLFGEQIALLKQVFPLARVGSVGCASVDAGLIGYADPDCAHGEHRVFD EDSVVEIVDEDSGEPIDEPGRRGLLLVTNLQRRLMPVIRYPSGDLACWREPPGPNRKFALQGRAGNGHRVRVGTLSLFPE ELGRALGEPHELLGWQLDISREGGRDRLELLLAARAPLDLEKMRQALLAGQPAIAELCETARLSLALTQTTPEAMRTHPR SGKLLRVVDRRDYQPAEATA
Specific function: Unknown
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45830; Mature: 45830
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00133 CARBOXYPEPT_ZN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPKLISLVEHARNHSPHYNALYHGLPAEGWRLSDLPPVDPAAYWRDSQDLSRWPALTAA CCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHCCCCEEC PEDGHVFKTGGSTGDGKLSVFSRAEWQAFVAAFGAGLARQLRPGDRVANLFFAGDLYTSL CCCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHHHHHHHH LFIHGALSHAPVPVLEFPFTCNVDNDALAGAISRHRINVLAGVPAQLLRFAHYLEARAQA HHHHHHHHCCCCCEEECCEEECCCCHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHH LAEVETVLYGGESLFGEQIALLKQVFPLARVGSVGCASVDAGLIGYADPDCAHGEHRVFD HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCEEECCCCCCCCCCCCCCC EDSVVEIVDEDSGEPIDEPGRRGLLLVTNLQRRLMPVIRYPSGDLACWREPPGPNRKFAL CCCEEEEEECCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCEEEECCCCCCCCEEEE QGRAGNGHRVRVGTLSLFPEELGRALGEPHELLGWQLDISREGGRDRLELLLAARAPLDL EECCCCCCEEEEEEHHHCHHHHHHHHCCCHHHCCEEEEECCCCCHHHHHHHHHHCCCCCH EKMRQALLAGQPAIAELCETARLSLALTQTTPEAMRTHPRSGKLLRVVDRRDYQPAEATA HHHHHHHHCCCHHHHHHHHHHHHEEEEECCCHHHHHCCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MNPKLISLVEHARNHSPHYNALYHGLPAEGWRLSDLPPVDPAAYWRDSQDLSRWPALTAA CCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHCCCCHHHHHCCCCEEC PEDGHVFKTGGSTGDGKLSVFSRAEWQAFVAAFGAGLARQLRPGDRVANLFFAGDLYTSL CCCCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHHHHHHHH LFIHGALSHAPVPVLEFPFTCNVDNDALAGAISRHRINVLAGVPAQLLRFAHYLEARAQA HHHHHHHHCCCCCEEECCEEECCCCHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHH LAEVETVLYGGESLFGEQIALLKQVFPLARVGSVGCASVDAGLIGYADPDCAHGEHRVFD HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCEEECCCCCCCCCCCCCCC EDSVVEIVDEDSGEPIDEPGRRGLLLVTNLQRRLMPVIRYPSGDLACWREPPGPNRKFAL CCCEEEEEECCCCCCCCCCCCCCEEEEECHHHHHHHHHCCCCCCEEEECCCCCCCCEEEE QGRAGNGHRVRVGTLSLFPEELGRALGEPHELLGWQLDISREGGRDRLELLLAARAPLDL EECCCCCCEEEEEEHHHCHHHHHHHHCCCHHHCCEEEEECCCCCHHHHHHHHHHCCCCCH EKMRQALLAGQPAIAELCETARLSLALTQTTPEAMRTHPRSGKLLRVVDRRDYQPAEATA HHHHHHHHCCCHHHHHHHHHHHHEEEEECCCHHHHHCCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA