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The map label for this gene is trg [C]

Identifier: 34499699

GI number: 34499699

Start: 4580730

End: 4582379

Strand: Reverse

Name: trg [C]

Synonym: CV_4244

Alternate gene names: 34499699

Gene position: 4582379-4580730 (Counterclockwise)

Preceding gene: 34499701

Following gene: 34499697

Centisome position: 96.45

GC content: 67.52

Gene sequence:

>1650_bases
ATGTTGAGCCAATTTTCAATCGGCCAGCGCATCGCGGCGCTGGCGGGAGCCTTGCTGCTGGCGGTGGGGGTGGTGGGCGG
CGTAGGCTGGTGGTCGATGGACAAGATCAACCGCGAGCTGACCGCGTTGTTCGACCAGAAGATCGCGTTCCGGCACCAGA
TGGACGATCTGCAGCGGACCATGCTGCACATCCGCCAGGACGAGAAGAACATTTTCATCAGCATCGGCAATCCGGCCAAT
TCCGATCAGAGCATCCAGACCAACAAGCAGCTGCTGGACAAGCACATCGCCGATTTCAGGTCCGGCGTGGCCAAGGCCAA
GGGCATGGCGATGGCGGCGGACCATCAGGGCGAGTTCGACGGCATGCTGGAGGGCATCGCCGGCTATGAGCAAGGGATGG
GCGGCCTGTACCAGAAGATCGCTTCCGGCGAGATCGCCGCGGCCAATATCGGCGACGCCGGCATCGCGCCGTTCAAGCCC
AAGCTGTACGCGGCGCGCGGGGCGCTGGACAAGCTGAGCAAGCTGGCGGACGACAGCGCGCAGCAGGCGGAAACCGATCT
GGAAACCAGCATGGCGCGCACCCAGCAAGGCATGCTGACGGTATTGCTGCTGGCGCTGCTGGTCGGCGTGGCGCTGGCCT
GGGTGATCGTGCGCTCGATCACCGCGCCGCTGCGGGCGATGCAGGACAGCATGCGCCACGCGGCCGAGCACAACGACCTG
ACCATCGCGGTGGATCAGACCGGCCGCGACGAGGTTAGCGAGACCGGCCGCGCGCTGGCCCAACTGCTGGCCAATCTGCG
CGCCTTCATCGGCCAGACGCGCGAAGACGCGAAGCAGGTCAACGACACCGCCCACGCGCTGTCCGAGGTGTCGCGCCGCA
TCGCCGACGCCTCCAGGGTGCAGACCGACGCCTCGTCGTCCACCGCGGCGGCGGTGGAGCAGATGACGGTCAGCATCAAC
CTGGTAGCGGAGCACGCCGCGGAAATGGCCAGCGAGGCCAAGAGCAGCATGAGCGCGGCGGTCAGCGGCAGCGAGACGGC
GGGCGAGACCGCCGGGCAGATGCAGGAGATCGCGCGGGTGATCGGGCGCTCGGAAACCATCATCAGCGGCCTGAACCAGC
GCTCGGACGAGATCGGCAACATCGTCGACGTGATCCACGACATCGCCGAGCAGACCAATCTGCTGGCGCTGAACGCGGCG
ATCGAGGCGGCGCGCGCCGGCGAGATGGGCCGCGGCTTCGCGGTGGTGGCCGACGAGGTGAGAAAGCTGGCCGAGCGCAC
CGCTCAAGCCACCGGCGAGATCTCCGAGAAGATCCAGGCGGTGCAGGGCGACACCTCCACCGCGGCGGCCAGCATGCGCG
AGGCGGCGGAGCGCGTGTCCAGCGGCGTGGCGCTCAGCGGGCAGCTCAGCGAACGGCTGGAGCAGATCCGCACGCTGTCC
TCCGGCCTGTTGGACAAGACCAGCGAGATCGCCGCGGCGATGCGCGAGCAGAGCACCGCCAGCAACGAGGCGGCCAAGAA
TGTCGAGCGCATCGCCAATATGGGTTCGGAAAACGGCCAGTCGGTGGAGTCGTCGTCGGCGATGGCCAGCCAGCTGTCTG
GCCTGGCGCACAGCCTGGACGAGGCGATCAGCCGCTTTCGCACCGCCTGA

Upstream 100 bases:

>100_bases
TCACAGACCAAATAAATTAGTATTAGTATCAAATCGATACTTTATTTATCAGCGTAGAATTTCAAAACAAATTGATAAAC
CAAACAGAGACGGGGAAGTC

Downstream 100 bases:

>100_bases
GGCGGCGGTCAGCCGGCCAGCAGCGCCTGGCGCAGCCGGTCGGCCAGGCCCGGCCAGGCGCGCGCCGGCGCTTCGCGGCG
CGGCGCGGCCCAGATCGGGC

Product: methyl-accepting chemotaxis transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MLSQFSIGQRIAALAGALLLAVGVVGGVGWWSMDKINRELTALFDQKIAFRHQMDDLQRTMLHIRQDEKNIFISIGNPAN
SDQSIQTNKQLLDKHIADFRSGVAKAKGMAMAADHQGEFDGMLEGIAGYEQGMGGLYQKIASGEIAAANIGDAGIAPFKP
KLYAARGALDKLSKLADDSAQQAETDLETSMARTQQGMLTVLLLALLVGVALAWVIVRSITAPLRAMQDSMRHAAEHNDL
TIAVDQTGRDEVSETGRALAQLLANLRAFIGQTREDAKQVNDTAHALSEVSRRIADASRVQTDASSSTAAAVEQMTVSIN
LVAEHAAEMASEAKSSMSAAVSGSETAGETAGQMQEIARVIGRSETIISGLNQRSDEIGNIVDVIHDIAEQTNLLALNAA
IEAARAGEMGRGFAVVADEVRKLAERTAQATGEISEKIQAVQGDTSTAAASMREAAERVSSGVALSGQLSERLEQIRTLS
SGLLDKTSEIAAAMREQSTASNEAAKNVERIANMGSENGQSVESSSAMASQLSGLAHSLDEAISRFRTA

Sequences:

>Translated_549_residues
MLSQFSIGQRIAALAGALLLAVGVVGGVGWWSMDKINRELTALFDQKIAFRHQMDDLQRTMLHIRQDEKNIFISIGNPAN
SDQSIQTNKQLLDKHIADFRSGVAKAKGMAMAADHQGEFDGMLEGIAGYEQGMGGLYQKIASGEIAAANIGDAGIAPFKP
KLYAARGALDKLSKLADDSAQQAETDLETSMARTQQGMLTVLLLALLVGVALAWVIVRSITAPLRAMQDSMRHAAEHNDL
TIAVDQTGRDEVSETGRALAQLLANLRAFIGQTREDAKQVNDTAHALSEVSRRIADASRVQTDASSSTAAAVEQMTVSIN
LVAEHAAEMASEAKSSMSAAVSGSETAGETAGQMQEIARVIGRSETIISGLNQRSDEIGNIVDVIHDIAEQTNLLALNAA
IEAARAGEMGRGFAVVADEVRKLAERTAQATGEISEKIQAVQGDTSTAAASMREAAERVSSGVALSGQLSERLEQIRTLS
SGLLDKTSEIAAAMREQSTASNEAAKNVERIANMGSENGQSVESSSAMASQLSGLAHSLDEAISRFRTA
>Mature_549_residues
MLSQFSIGQRIAALAGALLLAVGVVGGVGWWSMDKINRELTALFDQKIAFRHQMDDLQRTMLHIRQDEKNIFISIGNPAN
SDQSIQTNKQLLDKHIADFRSGVAKAKGMAMAADHQGEFDGMLEGIAGYEQGMGGLYQKIASGEIAAANIGDAGIAPFKP
KLYAARGALDKLSKLADDSAQQAETDLETSMARTQQGMLTVLLLALLVGVALAWVIVRSITAPLRAMQDSMRHAAEHNDL
TIAVDQTGRDEVSETGRALAQLLANLRAFIGQTREDAKQVNDTAHALSEVSRRIADASRVQTDASSSTAAAVEQMTVSIN
LVAEHAAEMASEAKSSMSAAVSGSETAGETAGQMQEIARVIGRSETIISGLNQRSDEIGNIVDVIHDIAEQTNLLALNAA
IEAARAGEMGRGFAVVADEVRKLAERTAQATGEISEKIQAVQGDTSTAAASMREAAERVSSGVALSGQLSERLEQIRTLS
SGLLDKTSEIAAAMREQSTASNEAAKNVERIANMGSENGQSVESSSAMASQLSGLAHSLDEAISRFRTA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=400, Percent_Identity=31.75, Blast_Score=122, Evalue=8e-29,
Organism=Escherichia coli, GI2367378, Length=365, Percent_Identity=31.2328767123288, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1788194, Length=349, Percent_Identity=30.6590257879656, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1788195, Length=338, Percent_Identity=31.3609467455621, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1789453, Length=400, Percent_Identity=27.5, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 58102; Mature: 58102

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSQFSIGQRIAALAGALLLAVGVVGGVGWWSMDKINRELTALFDQKIAFRHQMDDLQRT
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLHIRQDEKNIFISIGNPANSDQSIQTNKQLLDKHIADFRSGVAKAKGMAMAADHQGEFD
HHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHH
GMLEGIAGYEQGMGGLYQKIASGEIAAANIGDAGIAPFKPKLYAARGALDKLSKLADDSA
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHH
QQAETDLETSMARTQQGMLTVLLLALLVGVALAWVIVRSITAPLRAMQDSMRHAAEHNDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
TIAVDQTGRDEVSETGRALAQLLANLRAFIGQTREDAKQVNDTAHALSEVSRRIADASRV
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTDASSSTAAAVEQMTVSINLVAEHAAEMASEAKSSMSAAVSGSETAGETAGQMQEIARV
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
IGRSETIISGLNQRSDEIGNIVDVIHDIAEQTNLLALNAAIEAARAGEMGRGFAVVADEV
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHHHCCCCCCCHHHHHHHH
RKLAERTAQATGEISEKIQAVQGDTSTAAASMREAAERVSSGVALSGQLSERLEQIRTLS
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHH
SGLLDKTSEIAAAMREQSTASNEAAKNVERIANMGSENGQSVESSSAMASQLSGLAHSLD
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
EAISRFRTA
HHHHHHCCC
>Mature Secondary Structure
MLSQFSIGQRIAALAGALLLAVGVVGGVGWWSMDKINRELTALFDQKIAFRHQMDDLQRT
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLHIRQDEKNIFISIGNPANSDQSIQTNKQLLDKHIADFRSGVAKAKGMAMAADHQGEFD
HHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHH
GMLEGIAGYEQGMGGLYQKIASGEIAAANIGDAGIAPFKPKLYAARGALDKLSKLADDSA
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHH
QQAETDLETSMARTQQGMLTVLLLALLVGVALAWVIVRSITAPLRAMQDSMRHAAEHNDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
TIAVDQTGRDEVSETGRALAQLLANLRAFIGQTREDAKQVNDTAHALSEVSRRIADASRV
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTDASSSTAAAVEQMTVSINLVAEHAAEMASEAKSSMSAAVSGSETAGETAGQMQEIARV
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
IGRSETIISGLNQRSDEIGNIVDVIHDIAEQTNLLALNAAIEAARAGEMGRGFAVVADEV
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEHHHHHHHHHHCCCCCCCHHHHHHHH
RKLAERTAQATGEISEKIQAVQGDTSTAAASMREAAERVSSGVALSGQLSERLEQIRTLS
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHH
SGLLDKTSEIAAAMREQSTASNEAAKNVERIANMGSENGQSVESSSAMASQLSGLAHSLD
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
EAISRFRTA
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA