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The map label for this gene is lemA [H]

Identifier: 34499689

GI number: 34499689

Start: 4568359

End: 4568973

Strand: Reverse

Name: lemA [H]

Synonym: CV_4234

Alternate gene names: 34499689

Gene position: 4568973-4568359 (Counterclockwise)

Preceding gene: 34499695

Following gene: 34499688

Centisome position: 96.17

GC content: 63.41

Gene sequence:

>615_bases
ATGGAAAGGATGGCGAAGATGTGGAAAAAACTGTTGCTGGTCTTCACGCTGGCGGCCACGTTGAGCGGCTGCGGCTATAA
CGCGATGCAGGCCCAGGACGAAGCGGCCAACGCCGCCTGGTCCGAGGTGCTCAACCAGTACCAGCGCCGCGCCGACCTGA
TTCCCAATCTGGTGAAGACGGTGCAGGGCTACGCCAAGCACGAGAAGGACGTGCTGACCCAGGTGACCGAGGCGCGCGCC
CGCGTCGGCAGCATCCAGATGGACGCTGCTGCGGCCACCGACGAGAACAAGCTCAAGCAGTTCGCCGCCGCGCAGAATCA
GCTGGGCTCGGCGCTGTCTCGACTGCTGGTGGTGTCGGAAAACTACCCGCAGCTGAAGGCCGACCAGTCGTTCCGCGACC
TGCAGGCGCAGCTGGAAGGCACCGAGAACCGCATCGCGTTGGCGCGCAAGCGTTACATCGATTCGGTGCAGGCCTACAAC
GTCACCGTGCGCAGCTTCCCCAACAACCTGACCGCGATGATGTTCAGCCTGAAGACCCGGCCCAACTTCGCCGTGGAAAA
CGAGAAGGCCATCTCGGCGCCGCCGCAGGTGAACTTCGACCAGCAAGGCAAGTGA

Upstream 100 bases:

>100_bases
CCGCCAATCCCGCGGCCATGAGTTTTTTTGGTTTCCGGCGCGGCGGCGTTTTTCGGTAAGCTATCGCTTTTGAATACGTT
CCTAGCGGGCGTTTCGCAAT

Downstream 100 bases:

>100_bases
GATGAGCCGCGCATGGTCCTGGCTGTGGCTTGCGCTGTGCCTGCTGGCGGGCGCGGTTCGGGCCGAGGTGGCGGTGCCGC
CGCCGACCTCGCCGGTGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MERMAKMWKKLLLVFTLAATLSGCGYNAMQAQDEAANAAWSEVLNQYQRRADLIPNLVKTVQGYAKHEKDVLTQVTEARA
RVGSIQMDAAAATDENKLKQFAAAQNQLGSALSRLLVVSENYPQLKADQSFRDLQAQLEGTENRIALARKRYIDSVQAYN
VTVRSFPNNLTAMMFSLKTRPNFAVENEKAISAPPQVNFDQQGK

Sequences:

>Translated_204_residues
MERMAKMWKKLLLVFTLAATLSGCGYNAMQAQDEAANAAWSEVLNQYQRRADLIPNLVKTVQGYAKHEKDVLTQVTEARA
RVGSIQMDAAAATDENKLKQFAAAQNQLGSALSRLLVVSENYPQLKADQSFRDLQAQLEGTENRIALARKRYIDSVQAYN
VTVRSFPNNLTAMMFSLKTRPNFAVENEKAISAPPQVNFDQQGK
>Mature_204_residues
MERMAKMWKKLLLVFTLAATLSGCGYNAMQAQDEAANAAWSEVLNQYQRRADLIPNLVKTVQGYAKHEKDVLTQVTEARA
RVGSIQMDAAAATDENKLKQFAAAQNQLGSALSRLLVVSENYPQLKADQSFRDLQAQLEGTENRIALARKRYIDSVQAYN
VTVRSFPNNLTAMMFSLKTRPNFAVENEKAISAPPQVNFDQQGK

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 22759; Mature: 22759

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERMAKMWKKLLLVFTLAATLSGCGYNAMQAQDEAANAAWSEVLNQYQRRADLIPNLVKT
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQGYAKHEKDVLTQVTEARARVGSIQMDAAAATDENKLKQFAAAQNQLGSALSRLLVVSE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
NYPQLKADQSFRDLQAQLEGTENRIALARKRYIDSVQAYNVTVRSFPNNLTAMMFSLKTR
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PNFAVENEKAISAPPQVNFDQQGK
CCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MERMAKMWKKLLLVFTLAATLSGCGYNAMQAQDEAANAAWSEVLNQYQRRADLIPNLVKT
CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQGYAKHEKDVLTQVTEARARVGSIQMDAAAATDENKLKQFAAAQNQLGSALSRLLVVSE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
NYPQLKADQSFRDLQAQLEGTENRIALARKRYIDSVQAYNVTVRSFPNNLTAMMFSLKTR
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
PNFAVENEKAISAPPQVNFDQQGK
CCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]