| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is ygcG [H]
Identifier: 34499688
GI number: 34499688
Start: 4567512
End: 4568357
Strand: Reverse
Name: ygcG [H]
Synonym: CV_4233
Alternate gene names: 34499688
Gene position: 4568357-4567512 (Counterclockwise)
Preceding gene: 34499689
Following gene: 34499687
Centisome position: 96.15
GC content: 69.5
Gene sequence:
>846_bases ATGAGCCGCGCATGGTCCTGGCTGTGGCTTGCGCTGTGCCTGCTGGCGGGCGCGGTTCGGGCCGAGGTGGCGGTGCCGCC GCCGACCTCGCCGGTGATCGATCAGGCGGCTTTCCTGACCGACGCCGAGCGCGGCGAGCTGGAAAAGCAACTGCTGGATT TCCGCCAGCGCAAGGGCAGCCAGCTGGCGGTGCTGATCGTGCCGACCGTCGATCCGGAAACGCCGTTCGATTACGGCACT CGGGTGATGGACAGCTGGAAGCTGGGGCGCAAGGGCGTGGACGACGGCGCGCTGCTGCTGATCGTCGCCGAGTCGCGCAA GACCCAGCTGCTGGTCGGACGCGGCCTGGAGGGCGCGATTCCGGATATCTACGCCAAGCGCATCCTGCAGGACACGCTGC GGCCACTGTTCAAGCAGGGGCTGCGCTTCCAGGGCATCCAGGCGGCGACGGCGCAGATCGAGGGCCTGATAGACGGCGAG AAGCTGCCTGAACCGGCCAAGCCGGCCACGCAGGGAAGCGGCTGGAGCGACAGCTGGCCCTTGCTGGCCTTCTTCCTGCT GATCGGCTCCGGCGTCGCCGGCAAGCTGTTCGGCCGGCTGGTCGGCAGCTTCATCATCGGCTGCCTCAGCATAGGCCTGG CGGCGGTGTTGGGCGCCGACATGCTGACGGCGCTGCTGATAGGCGCGATGGCCGCCGGCTTGTGCCTGGTCCTGGGCGAG CATGGCCTGTCCTTGGCCAACTGGGGCAATTGGGGCGGCGGTGGCGGTTCGGGTTCGGATGGCGGCAGCGGATGGTCCGG CGGCGGCGGGGATTTCGGCGGCGGCGGCGCTTCGGGAGACTGGTGA
Upstream 100 bases:
>100_bases ATGATGTTCAGCCTGAAGACCCGGCCCAACTTCGCCGTGGAAAACGAGAAGGCCATCTCGGCGCCGCCGCAGGTGAACTT CGACCAGCAAGGCAAGTGAG
Downstream 100 bases:
>100_bases GATGAATCGATGGCAACGCGCATGGCGCCACCTGTGCAGCACCGGCTGGCAGGCGCGGCGGCAATTCCCTGCCGCTCAAC TGAAGCGGCTGGAGCGGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSRAWSWLWLALCLLAGAVRAEVAVPPPTSPVIDQAAFLTDAERGELEKQLLDFRQRKGSQLAVLIVPTVDPETPFDYGT RVMDSWKLGRKGVDDGALLLIVAESRKTQLLVGRGLEGAIPDIYAKRILQDTLRPLFKQGLRFQGIQAATAQIEGLIDGE KLPEPAKPATQGSGWSDSWPLLAFFLLIGSGVAGKLFGRLVGSFIIGCLSIGLAAVLGADMLTALLIGAMAAGLCLVLGE HGLSLANWGNWGGGGGSGSDGGSGWSGGGGDFGGGGASGDW
Sequences:
>Translated_281_residues MSRAWSWLWLALCLLAGAVRAEVAVPPPTSPVIDQAAFLTDAERGELEKQLLDFRQRKGSQLAVLIVPTVDPETPFDYGT RVMDSWKLGRKGVDDGALLLIVAESRKTQLLVGRGLEGAIPDIYAKRILQDTLRPLFKQGLRFQGIQAATAQIEGLIDGE KLPEPAKPATQGSGWSDSWPLLAFFLLIGSGVAGKLFGRLVGSFIIGCLSIGLAAVLGADMLTALLIGAMAAGLCLVLGE HGLSLANWGNWGGGGGSGSDGGSGWSGGGGDFGGGGASGDW >Mature_280_residues SRAWSWLWLALCLLAGAVRAEVAVPPPTSPVIDQAAFLTDAERGELEKQLLDFRQRKGSQLAVLIVPTVDPETPFDYGTR VMDSWKLGRKGVDDGALLLIVAESRKTQLLVGRGLEGAIPDIYAKRILQDTLRPLFKQGLRFQGIQAATAQIEGLIDGEK LPEPAKPATQGSGWSDSWPLLAFFLLIGSGVAGKLFGRLVGSFIIGCLSIGLAAVLGADMLTALLIGAMAAGLCLVLGEH GLSLANWGNWGGGGGSGSDGGSGWSGGGGDFGGGGASGDW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=218, Percent_Identity=27.5229357798165, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 29227; Mature: 29096
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRAWSWLWLALCLLAGAVRAEVAVPPPTSPVIDQAAFLTDAERGELEKQLLDFRQRKGS CCCHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC QLAVLIVPTVDPETPFDYGTRVMDSWKLGRKGVDDGALLLIVAESRKTQLLVGRGLEGAI EEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCCCCCC PDIYAKRILQDTLRPLFKQGLRFQGIQAATAQIEGLIDGEKLPEPAKPATQGSGWSDSWP HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH LLAFFLLIGSGVAGKLFGRLVGSFIIGCLSIGLAAVLGADMLTALLIGAMAAGLCLVLGE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HGLSLANWGNWGGGGGSGSDGGSGWSGGGGDFGGGGASGDW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRAWSWLWLALCLLAGAVRAEVAVPPPTSPVIDQAAFLTDAERGELEKQLLDFRQRKGS CCHHHHHHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC QLAVLIVPTVDPETPFDYGTRVMDSWKLGRKGVDDGALLLIVAESRKTQLLVGRGLEGAI EEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEECCCCCCC PDIYAKRILQDTLRPLFKQGLRFQGIQAATAQIEGLIDGEKLPEPAKPATQGSGWSDSWP HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH LLAFFLLIGSGVAGKLFGRLVGSFIIGCLSIGLAAVLGADMLTALLIGAMAAGLCLVLGE HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC HGLSLANWGNWGGGGGSGSDGGSGWSGGGGDFGGGGASGDW CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]