| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499679
Identifier: 34499679
GI number: 34499679
Start: 4558478
End: 4559362
Strand: Direct
Name: 34499679
Synonym: CV_4224
Alternate gene names: NA
Gene position: 4558478-4559362 (Clockwise)
Preceding gene: 34499676
Following gene: 34499684
Centisome position: 95.95
GC content: 61.92
Gene sequence:
>885_bases ATGAATCGGCAAGGGCAAACTAGAAGGAATCAAGAATATCAATACTGGAAATATCAACCCATCCTTGCTGATACTCATTT TGACAGCGGCGGGAAAAGCCGCCTTGATTCCCCATACCAAAGGAAATCATCCGTGAAGAAACCGCTTGCCGTTTCATGCC TGCTGGCATGGGCCCAATTCGCCGCCGCCGCCCCTTTTTCGCCTCAGGAAACCAATTACATCAAGCTGGACTTTCAGAAT CAGAATGGCAGCCGGAATATCTGCGGCGGGTCGCTGGTGGGGAAAGATCTGGTGCTGACCGCCTCGCATTGCATCCTGGA CAACTGGGCCGGCGTCACCGCCTACTACGGCCGGAATTTTGAAAACCAGGCCAGCGCCCGGCGCGACAACGACCGGCCCA ACTGGATCAAATTCGACCATCACGGCGTAGCCGTGGACCTGGCCCTGCTCAAGCTGTCCCAGCCGATCGCCGGCCGCAAT GGCGCCCGGATCGTCCCGGTGGTGGCGCAGGAAGATTGCAATGCCGGCATCGGCGCGATGCAGGCCCAGCGAAGGATGGA CGACCAGGGCTACCAGTTGGGGCACAGCCTGATGCAGGTCAGCGTCGCCAACATCGTCCGCCTGGGGCCGTCGCCGCTGG CCAATGGCGTGTCCCTGCTGGCCAATGGCAATGTCGGCCGCGGCGGCGACTCCGGCAGCCCGCTGCTCTCGGCCAAGGGC GTTCAAGTGGGGGTGTACAACGGCAATGCCGGCAATGTTTCCGCCTTCGCCGCGCTGTGCAAATACGCCAACCATATCCA GGCCTGGTCGGAAACGCTCAGCCCGGCAAGCAGCCAGACGCCGCCTCCCGGCGACTGGGTGTGGCCGGATGCCCGGCGGC GCTGA
Upstream 100 bases:
>100_bases CGCCGAATTCAAATTCAGATAAAACCGAAAATTAAATGTCATTGAAAAATCCGGCGCGGATTCGGCATTCTCCATTCCAC AAATATCTTCGCCGGGCATA
Downstream 100 bases:
>100_bases CGCGTTCGGAAAAGGCAACAAAGCGGCCCGCGGGCCGCTTTGTTGCGGACGGCGGCCACAACCGCCTGGCCGAGGTCCTA CACCAAGCGGCCGCCCCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MNRQGQTRRNQEYQYWKYQPILADTHFDSGGKSRLDSPYQRKSSVKKPLAVSCLLAWAQFAAAAPFSPQETNYIKLDFQN QNGSRNICGGSLVGKDLVLTASHCILDNWAGVTAYYGRNFENQASARRDNDRPNWIKFDHHGVAVDLALLKLSQPIAGRN GARIVPVVAQEDCNAGIGAMQAQRRMDDQGYQLGHSLMQVSVANIVRLGPSPLANGVSLLANGNVGRGGDSGSPLLSAKG VQVGVYNGNAGNVSAFAALCKYANHIQAWSETLSPASSQTPPPGDWVWPDARRR
Sequences:
>Translated_294_residues MNRQGQTRRNQEYQYWKYQPILADTHFDSGGKSRLDSPYQRKSSVKKPLAVSCLLAWAQFAAAAPFSPQETNYIKLDFQN QNGSRNICGGSLVGKDLVLTASHCILDNWAGVTAYYGRNFENQASARRDNDRPNWIKFDHHGVAVDLALLKLSQPIAGRN GARIVPVVAQEDCNAGIGAMQAQRRMDDQGYQLGHSLMQVSVANIVRLGPSPLANGVSLLANGNVGRGGDSGSPLLSAKG VQVGVYNGNAGNVSAFAALCKYANHIQAWSETLSPASSQTPPPGDWVWPDARRR >Mature_294_residues MNRQGQTRRNQEYQYWKYQPILADTHFDSGGKSRLDSPYQRKSSVKKPLAVSCLLAWAQFAAAAPFSPQETNYIKLDFQN QNGSRNICGGSLVGKDLVLTASHCILDNWAGVTAYYGRNFENQASARRDNDRPNWIKFDHHGVAVDLALLKLSQPIAGRN GARIVPVVAQEDCNAGIGAMQAQRRMDDQGYQLGHSLMQVSVANIVRLGPSPLANGVSLLANGNVGRGGDSGSPLLSAKG VQVGVYNGNAGNVSAFAALCKYANHIQAWSETLSPASSQTPPPGDWVWPDARRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31923; Mature: 31923
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: PS00134 TRYPSIN_HIS ; PS50240 TRYPSIN_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRQGQTRRNQEYQYWKYQPILADTHFDSGGKSRLDSPYQRKSSVKKPLAVSCLLAWAQF CCCCCCCCCCCCCCEEEECEEEEECCCCCCCHHHCCCHHHHHHHHCCCHHHHHHHHHHHH AAAAPFSPQETNYIKLDFQNQNGSRNICGGSLVGKDLVLTASHCILDNWAGVTAYYGRNF HHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHEEEHHHHHHHCCCCEEHHHCCCC ENQASARRDNDRPNWIKFDHHGVAVDLALLKLSQPIAGRNGARIVPVVAQEDCNAGIGAM CHHHHHCCCCCCCCEEEECCCCCEEHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHH QAQRRMDDQGYQLGHSLMQVSVANIVRLGPSPLANGVSLLANGNVGRGGDSGSPLLSAKG HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCEEEEECCCCCCCCCCCCCCEEECC VQVGVYNGNAGNVSAFAALCKYANHIQAWSETLSPASSQTPPPGDWVWPDARRR EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNRQGQTRRNQEYQYWKYQPILADTHFDSGGKSRLDSPYQRKSSVKKPLAVSCLLAWAQF CCCCCCCCCCCCCCEEEECEEEEECCCCCCCHHHCCCHHHHHHHHCCCHHHHHHHHHHHH AAAAPFSPQETNYIKLDFQNQNGSRNICGGSLVGKDLVLTASHCILDNWAGVTAYYGRNF HHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHEEEHHHHHHHCCCCEEHHHCCCC ENQASARRDNDRPNWIKFDHHGVAVDLALLKLSQPIAGRNGARIVPVVAQEDCNAGIGAM CHHHHHCCCCCCCCEEEECCCCCEEHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHH QAQRRMDDQGYQLGHSLMQVSVANIVRLGPSPLANGVSLLANGNVGRGGDSGSPLLSAKG HHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHCCEEEEECCCCCCCCCCCCCCEEECC VQVGVYNGNAGNVSAFAALCKYANHIQAWSETLSPASSQTPPPGDWVWPDARRR EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA