| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499666
Identifier: 34499666
GI number: 34499666
Start: 4544903
End: 4546372
Strand: Direct
Name: 34499666
Synonym: CV_4211
Alternate gene names: NA
Gene position: 4544903-4546372 (Clockwise)
Preceding gene: 34499665
Following gene: 34499667
Centisome position: 95.66
GC content: 67.35
Gene sequence:
>1470_bases ATGCGGCAAGCTGCTCGGCCAGGGCTTGTACCAGCTGGGCCGCGTACCGATGGATCCCGGGCAGCGCTACAAGCTGCTCA AGCTCTATCTGAAGGCGCTGGACCGTTATTATCCGCTGCTGGAGAACGAAGCCCAGCACGGCGACGCGGTCGCCTCGCCC AAAACGCGGCTGCTGGCGGCCATCAGCGTCAAGCTGTTCGCCAACCTGTTCCTGGCCTTCAAGCAAACCCTGCACGAAAA ATTCTCCCGCCATTCGCTGCTGGAGCGCGAACAGCCCAAGCAGGAGCTGCTGCTGTACACGATGATGGCGGCGCGGCAAT ACCTGAACATCAGCCAGCAAAGCTACTGTCCGCTGCCAGCCGGCTTCTGGCTGGACTGCCACCAGCTGTACGCGCTGGCG CTGCAGCGCGGCTGGCAGGACAAGTCGCTGGCCGGCGACGACACGCTGGCCGTCATCTACCGCCAGCTGCTTCTGCTCGG TCTGACCGCCACCAACCGGCTGTCCCCCGCCGACCTGCAATTGGTCAGGCAACTGGCCTACGACCTGGCGCGACAGGTGA CGCTGTTGCCGCTGGCGGACCTGACGGAGGCCCGCCAGGGCTATGTGCTGGACCTGGGCGAGGATGCCCCGCCGCGCTAT CTGCCGGCCAGGCCATCGCCGTCCCAGCCAGGCGCTTACCTGCTCGAACTGGACGGCGCGCTGGCCGCGATGAAACGCAG CCTGGAACAACTGCGCAAGACCGCGGCGGGCGCCGCCTCTCCGGCGCTGAACGACGAAGTCCAGCTGCTGAGCCATCTGG CCGAGGCATGGCAGCGCCCGCGCCGACGCAAGCATGCCCGGGAATCGGTCGAGACGGTGGTGGAGATCACCGCCGGCGTG GCCGCCATCTGGCACCGCGCCAACGGCGGCAGCTGGCAGCCCGCCGGCGCCGACCCCGACGAGAACAGCGCCCACCTGCG CCCGCCGCCCGCCTCCTGCCTGCTGACTGTCGTCAACCAGAGCGAATCTGGCTACCTGCTGCGCGGCCTGCCTCGCGAGC AGCCCTTGCGCGCCGGCGAGGTGCTGTTGCTGGACCGGCCCGACCAGCCGGGCGAGTCGTGTCTGTGCGCAGTGCGCTGG GTATTGATGCAGCCCTCCGGCAAGGAAGTGGAATGCGGCGTCGAGACGCTGGGCCCGCTGCCGCAGCCGGTGAGGGCCAT GCCCAGCATCACCCACAGCGGCGACAGTTTCCAACGGGGCTTGCGGCTGCCCGCCAACGGGAGCCGGCCGGCGCTGCTGC TGTTGCCCGGCCGTCCCTTCAGCCAGTTGCGCGAGTTCAGGCTGAGGGACGAAAACGGCGAGCAACTGGTCCGCGTTTCC AAGCTGCATCAGCAATCCCCCCATTTCCAGCTGATGGAATACCGCCCCAGCGAGCAATTTTGACCTGGCGCAAGCGCCGG GCTTTTTCAGTTACACTGCCCTCTCTATAA
Upstream 100 bases:
>100_bases TCGTTTTGCCGAAGAAGGATATGGACCCGCAACTCGTCGATACCCAGCCGGCCAGCGTCGCCGCCTGGCTGGAGCGTCTG CCCTACACCGACTTGGCCGA
Downstream 100 bases:
>100_bases TTATTCGCTTTCATAGAGAGGTCCGTTGATGCACTCGGTGATTCACGCTTCAGACCGCATCGTGGTCAAGGTAGGCTCCA GCCTGGTAACCAACGACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 489
Protein sequence:
>489_residues MRQAARPGLVPAGPRTDGSRAALQAAQALSEGAGPLLSAAGERSPARRRGRLAQNAAAGGHQRQAVRQPVPGLQANPARK ILPPFAAGARTAQAGAAAVHDDGGAAIPEHQPAKLLSAASRLLAGLPPAVRAGAAARLAGQVAGRRRHAGRHLPPAASAR SDRHQPAVPRRPAIGQATGLRPGATGDAVAAGGPDGGPPGLCAGPGRGCPAALSAGQAIAVPARRLPARTGRRAGRDETQ PGTTAQDRGGRRLSGAERRSPAAEPSGRGMAAPAPTQACPGIGRDGGGDHRRRGRHLAPRQRRQLAARRRRPRREQRPPA PAARLLPADCRQPERIWLPAARPASRAALARRRGAVAGPARPAGRVVSVRSALGIDAALRQGSGMRRRDAGPAAAAGEGH AQHHPQRRQFPTGLAAARQREPAGAAAVARPSLQPVARVQAEGRKRRATGPRFQAASAIPPFPADGIPPQRAILTWRKRR AFSVTLPSL
Sequences:
>Translated_489_residues MRQAARPGLVPAGPRTDGSRAALQAAQALSEGAGPLLSAAGERSPARRRGRLAQNAAAGGHQRQAVRQPVPGLQANPARK ILPPFAAGARTAQAGAAAVHDDGGAAIPEHQPAKLLSAASRLLAGLPPAVRAGAAARLAGQVAGRRRHAGRHLPPAASAR SDRHQPAVPRRPAIGQATGLRPGATGDAVAAGGPDGGPPGLCAGPGRGCPAALSAGQAIAVPARRLPARTGRRAGRDETQ PGTTAQDRGGRRLSGAERRSPAAEPSGRGMAAPAPTQACPGIGRDGGGDHRRRGRHLAPRQRRQLAARRRRPRREQRPPA PAARLLPADCRQPERIWLPAARPASRAALARRRGAVAGPARPAGRVVSVRSALGIDAALRQGSGMRRRDAGPAAAAGEGH AQHHPQRRQFPTGLAAARQREPAGAAAVARPSLQPVARVQAEGRKRRATGPRFQAASAIPPFPADGIPPQRAILTWRKRR AFSVTLPSL >Mature_489_residues MRQAARPGLVPAGPRTDGSRAALQAAQALSEGAGPLLSAAGERSPARRRGRLAQNAAAGGHQRQAVRQPVPGLQANPARK ILPPFAAGARTAQAGAAAVHDDGGAAIPEHQPAKLLSAASRLLAGLPPAVRAGAAARLAGQVAGRRRHAGRHLPPAASAR SDRHQPAVPRRPAIGQATGLRPGATGDAVAAGGPDGGPPGLCAGPGRGCPAALSAGQAIAVPARRLPARTGRRAGRDETQ PGTTAQDRGGRRLSGAERRSPAAEPSGRGMAAPAPTQACPGIGRDGGGDHRRRGRHLAPRQRRQLAARRRRPRREQRPPA PAARLLPADCRQPERIWLPAARPASRAALARRRGAVAGPARPAGRVVSVRSALGIDAALRQGSGMRRRDAGPAAAAGEGH AQHHPQRRQFPTGLAAARQREPAGAAAVARPSLQPVARVQAEGRKRRATGPRFQAASAIPPFPADGIPPQRAILTWRKRR AFSVTLPSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50321; Mature: 50321
Theoretical pI: Translated: 12.74; Mature: 12.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQAARPGLVPAGPRTDGSRAALQAAQALSEGAGPLLSAAGERSPARRRGRLAQNAAAGG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCCC HQRQAVRQPVPGLQANPARKILPPFAAGARTAQAGAAAVHDDGGAAIPEHQPAKLLSAAS HHHHHHHCCCCCCCCCCHHHHCCCHHCCCCHHHCCCEEEECCCCCCCCCCCHHHHHHHHH RLLAGLPPAVRAGAAARLAGQVAGRRRHAGRHLPPAASARSDRHQPAVPRRPAIGQATGL HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPGATGDAVAAGGPDGGPPGLCAGPGRGCPAALSAGQAIAVPARRLPARTGRRAGRDETQ CCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHCCCEEECCHHHCCHHHHHCCCCCCCC PGTTAQDRGGRRLSGAERRSPAAEPSGRGMAAPAPTQACPGIGRDGGGDHRRRGRHLAPR CCCCHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCHH QRRQLAARRRRPRREQRPPAPAARLLPADCRQPERIWLPAARPASRAALARRRGAVAGPA HHHHHHHHHHCCHHHCCCCCCHHHCCCHHCCCCCEEECCCCCCHHHHHHHHHCCCCCCCC RPAGRVVSVRSALGIDAALRQGSGMRRRDAGPAAAAGEGHAQHHPQRRQFPTGLAAARQR CCCCCEEHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCHHHCCCHHHCCCHHHHHHHHC EPAGAAAVARPSLQPVARVQAEGRKRRATGPRFQAASAIPPFPADGIPPQRAILTWRKRR CCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC AFSVTLPSL EEEEECCCC >Mature Secondary Structure MRQAARPGLVPAGPRTDGSRAALQAAQALSEGAGPLLSAAGERSPARRRGRLAQNAAAGG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCCC HQRQAVRQPVPGLQANPARKILPPFAAGARTAQAGAAAVHDDGGAAIPEHQPAKLLSAAS HHHHHHHCCCCCCCCCCHHHHCCCHHCCCCHHHCCCEEEECCCCCCCCCCCHHHHHHHHH RLLAGLPPAVRAGAAARLAGQVAGRRRHAGRHLPPAASARSDRHQPAVPRRPAIGQATGL HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RPGATGDAVAAGGPDGGPPGLCAGPGRGCPAALSAGQAIAVPARRLPARTGRRAGRDETQ CCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHCCCEEECCHHHCCHHHHHCCCCCCCC PGTTAQDRGGRRLSGAERRSPAAEPSGRGMAAPAPTQACPGIGRDGGGDHRRRGRHLAPR CCCCHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHCCCCCCHH QRRQLAARRRRPRREQRPPAPAARLLPADCRQPERIWLPAARPASRAALARRRGAVAGPA HHHHHHHHHHCCHHHCCCCCCHHHCCCHHCCCCCEEECCCCCCHHHHHHHHHCCCCCCCC RPAGRVVSVRSALGIDAALRQGSGMRRRDAGPAAAAGEGHAQHHPQRRQFPTGLAAARQR CCCCCEEHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCCHHHCCCHHHCCCHHHHHHHHC EPAGAAAVARPSLQPVARVQAEGRKRRATGPRFQAASAIPPFPADGIPPQRAILTWRKRR CCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC AFSVTLPSL EEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA