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The map label for this gene is tsr [C]

Identifier: 34499611

GI number: 34499611

Start: 4497491

End: 4499368

Strand: Reverse

Name: tsr [C]

Synonym: CV_4156

Alternate gene names: 34499611

Gene position: 4499368-4497491 (Counterclockwise)

Preceding gene: 34499614

Following gene: 34499610

Centisome position: 94.7

GC content: 65.12

Gene sequence:

>1878_bases
ATGCGCTCTTTGCGTGTCAAGCTGATTGCGTTTATAGCCCTGCTGCTGGTTGTGCTGGGCCTGGTGATTACGGTGCTGGT
TTACACCCAGATGCGTAATGAGATCGTCCGCGGCGTGGACAACGAGCTTGGCGGCACCTCCAAGGGCTATTCGGCCCTGG
TGAGCAGCTGGTACAAGAGCAAGGTGGGCGTGGTGATCGCGGCGAATCCGCTGGTCGGCACGCCGGACCCCCGCCAGACG
CTGGCGCGGCTTAGCCAGGCCGGCGGTTTCGACATGACCTATATCGGCACCGCCGAGCACGTGATGATACGTTCGGACAT
GAAGCCGCAGCCGCAAGGCTACGACCCGGTCGCGCGGCCCTGGTACCAGCAGGCGGCGGCCAGCGGCAATCCGGGCGTGT
CCGACCCCTATGTCGATTTCGACACCAAGAAGCTGGTGGTGACCTTCGTGTCCCCGGTGAAAGACGGCAGCGCGCTGAAG
GCCGTGGTCGGCGGCGACATCTTCATCGACGACCTGGTCAAGACCGTGTTGTCGGTGAAGCTGCGCGGCAACGGCTACGC
CTTCCTGGTCGACAAGGGCGGCAAGGTAATCGCCCACCCTGACGCCAGCCTGACCCTGAAGCCGCTGTCCGAGAAGGTGC
CTGAGTTGACGGCGGACCGGCTGGGCAAACTGGCGGCGGACACCACGATGCAGGAGGTCAGCATCGGGGGCGAGAGCAAG
CTGATCGAGGTGCAGCCGGTGGAGGGCACCAACTGGCTGCTGGGCGTGGTGACCGACGAGTCGGTGGTCACCGGTCCGCT
GAACACCCTGCTGCTGACCGTGGTGGGCATCGGCGCGCTGTGCGTGGTGATCCTGATCCCGGTGGCCAGCCTGCTGCTGA
GCAGGATGCTGGCCGGCCTGGGCCGCCTGCGCAATGCCATGCTGGAAATTTCCCAGGGCGAGGGCGACCTGACGCGCCGC
ATCCAGGTGACTGGTCAGGACGAGATCGCCGAGACCGCCACCGCTTTCAACCGCTTCATCGGCCAGCTGCAAAAGATGTT
CATCGCGGTGAAGGAGGAGGCGGAGCGCGTCACCGGCGGCGTGGAGAGCGTGACCGACACCGTGGACAAGGTGGCGCACG
ATTCGCGCCAGATTTCCGATGTGTCCAGCTCCAACGCGGCCACGCTTGAGGAGATCACCGTCAGCATCTCGCACATCGCC
GACGCCGCGCGCGAGGCCGATGGCCTGGTCAATCACACCGGCCAGGTGTCCAGCGAAAGCGCGCACGGCATGCAGCAGAT
CTCGCAGGAGATGAACAGCACCGTCGACGCGGTGAAGGGGCTGTCCGCGATGCTGTCCTCGCTTGACCAGCGTTCGCAGC
AGATCAGCGGCATCACCAATGTGATCAAGGACATCGCCGACCAGACCAATCTGTTGGCGCTGAACGCCGCGATCGAGGCG
GCGCGCGCCGGCGAGATGGGACGCGGCTTCGCGGTGGTGGCCGACGAGGTGCGCAAGCTGGCCGAGCGCACCGGCCAGGC
GACGGTAGAGATCTCGGGCATGGTCAGCACCATACGCGAGGAAACCAGCCAGGCGGTCAGCAATATGCAGCGCACGGTGA
GTTCGGTTGACGGCGGCGTGGAGCTGACGCTGGGCGCGGTGCAGCGCATCGAGCAGATCCAGCAGGCGATGCAGGAAGTG
ATGGCCAAGATGAACGAGATCACGCTGTCCACCAGCGAGCAGCACAAGGCCACCACGATGATCGCCCAGAGCACCGAGCA
GATCAACGGCCGCATCGTCGACAGCGACGACGCGCTGCAAACCGTGCGCGACACGTTGTCGGAGCTGTCGCAGTCGGCGA
CCAGCATGCGCCAGCTGTTTTCCAGCTTCCGCGTCTGA

Upstream 100 bases:

>100_bases
GGACTAAACCGGAGTAACGGCTGCAAATAACAGCGCCCGACGCCGCGGCAATCGCGGTCGAGACGGCCTTGCATGTGATT
GGGGATGAGGAGGAAGTGTA

Downstream 100 bases:

>100_bases
TCGGCGCCCATCCCAAGCCCGGCATGTCCGGGCTTTTTCACGCCTGTCGCGGATGCTTGATCTGGATCGGCAAAACGGCG
TGGCGGCTGGTTGGATCGGT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 625; Mature: 625

Protein sequence:

>625_residues
MRSLRVKLIAFIALLLVVLGLVITVLVYTQMRNEIVRGVDNELGGTSKGYSALVSSWYKSKVGVVIAANPLVGTPDPRQT
LARLSQAGGFDMTYIGTAEHVMIRSDMKPQPQGYDPVARPWYQQAAASGNPGVSDPYVDFDTKKLVVTFVSPVKDGSALK
AVVGGDIFIDDLVKTVLSVKLRGNGYAFLVDKGGKVIAHPDASLTLKPLSEKVPELTADRLGKLAADTTMQEVSIGGESK
LIEVQPVEGTNWLLGVVTDESVVTGPLNTLLLTVVGIGALCVVILIPVASLLLSRMLAGLGRLRNAMLEISQGEGDLTRR
IQVTGQDEIAETATAFNRFIGQLQKMFIAVKEEAERVTGGVESVTDTVDKVAHDSRQISDVSSSNAATLEEITVSISHIA
DAAREADGLVNHTGQVSSESAHGMQQISQEMNSTVDAVKGLSAMLSSLDQRSQQISGITNVIKDIADQTNLLALNAAIEA
ARAGEMGRGFAVVADEVRKLAERTGQATVEISGMVSTIREETSQAVSNMQRTVSSVDGGVELTLGAVQRIEQIQQAMQEV
MAKMNEITLSTSEQHKATTMIAQSTEQINGRIVDSDDALQTVRDTLSELSQSATSMRQLFSSFRV

Sequences:

>Translated_625_residues
MRSLRVKLIAFIALLLVVLGLVITVLVYTQMRNEIVRGVDNELGGTSKGYSALVSSWYKSKVGVVIAANPLVGTPDPRQT
LARLSQAGGFDMTYIGTAEHVMIRSDMKPQPQGYDPVARPWYQQAAASGNPGVSDPYVDFDTKKLVVTFVSPVKDGSALK
AVVGGDIFIDDLVKTVLSVKLRGNGYAFLVDKGGKVIAHPDASLTLKPLSEKVPELTADRLGKLAADTTMQEVSIGGESK
LIEVQPVEGTNWLLGVVTDESVVTGPLNTLLLTVVGIGALCVVILIPVASLLLSRMLAGLGRLRNAMLEISQGEGDLTRR
IQVTGQDEIAETATAFNRFIGQLQKMFIAVKEEAERVTGGVESVTDTVDKVAHDSRQISDVSSSNAATLEEITVSISHIA
DAAREADGLVNHTGQVSSESAHGMQQISQEMNSTVDAVKGLSAMLSSLDQRSQQISGITNVIKDIADQTNLLALNAAIEA
ARAGEMGRGFAVVADEVRKLAERTGQATVEISGMVSTIREETSQAVSNMQRTVSSVDGGVELTLGAVQRIEQIQQAMQEV
MAKMNEITLSTSEQHKATTMIAQSTEQINGRIVDSDDALQTVRDTLSELSQSATSMRQLFSSFRV
>Mature_625_residues
MRSLRVKLIAFIALLLVVLGLVITVLVYTQMRNEIVRGVDNELGGTSKGYSALVSSWYKSKVGVVIAANPLVGTPDPRQT
LARLSQAGGFDMTYIGTAEHVMIRSDMKPQPQGYDPVARPWYQQAAASGNPGVSDPYVDFDTKKLVVTFVSPVKDGSALK
AVVGGDIFIDDLVKTVLSVKLRGNGYAFLVDKGGKVIAHPDASLTLKPLSEKVPELTADRLGKLAADTTMQEVSIGGESK
LIEVQPVEGTNWLLGVVTDESVVTGPLNTLLLTVVGIGALCVVILIPVASLLLSRMLAGLGRLRNAMLEISQGEGDLTRR
IQVTGQDEIAETATAFNRFIGQLQKMFIAVKEEAERVTGGVESVTDTVDKVAHDSRQISDVSSSNAATLEEITVSISHIA
DAAREADGLVNHTGQVSSESAHGMQQISQEMNSTVDAVKGLSAMLSSLDQRSQQISGITNVIKDIADQTNLLALNAAIEA
ARAGEMGRGFAVVADEVRKLAERTGQATVEISGMVSTIREETSQAVSNMQRTVSSVDGGVELTLGAVQRIEQIQQAMQEV
MAKMNEITLSTSEQHKATTMIAQSTEQINGRIVDSDDALQTVRDTLSELSQSATSMRQLFSSFRV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=306, Percent_Identity=30.0653594771242, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI1787690, Length=318, Percent_Identity=29.874213836478, Blast_Score=109, Evalue=4e-25,
Organism=Escherichia coli, GI1788194, Length=319, Percent_Identity=29.7805642633229, Blast_Score=107, Evalue=3e-24,
Organism=Escherichia coli, GI1788195, Length=269, Percent_Identity=31.2267657992565, Blast_Score=106, Evalue=4e-24,
Organism=Escherichia coli, GI1789453, Length=310, Percent_Identity=24.8387096774194, Blast_Score=94, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 66768; Mature: 66768

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLRVKLIAFIALLLVVLGLVITVLVYTQMRNEIVRGVDNELGGTSKGYSALVSSWYKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHC
KVGVVIAANPLVGTPDPRQTLARLSQAGGFDMTYIGTAEHVMIRSDMKPQPQGYDPVARP
CCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHEEEECCCCCCCCCCCCCCCH
WYQQAAASGNPGVSDPYVDFDTKKLVVTFVSPVKDGSALKAVVGGDIFIDDLVKTVLSVK
HHHHHHCCCCCCCCCCCCCCCCHHEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHEE
LRGNGYAFLVDKGGKVIAHPDASLTLKPLSEKVPELTADRLGKLAADTTMQEVSIGGESK
ECCCCEEEEEECCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LIEVQPVEGTNWLLGVVTDESVVTGPLNTLLLTVVGIGALCVVILIPVASLLLSRMLAGL
EEEEEECCCCCEEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRLRNAMLEISQGEGDLTRRIQVTGQDEIAETATAFNRFIGQLQKMFIAVKEEAERVTGG
HHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VESVTDTVDKVAHDSRQISDVSSSNAATLEEITVSISHIADAAREADGLVNHTGQVSSES
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHH
AHGMQQISQEMNSTVDAVKGLSAMLSSLDQRSQQISGITNVIKDIADQTNLLALNAAIEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHH
ARAGEMGRGFAVVADEVRKLAERTGQATVEISGMVSTIREETSQAVSNMQRTVSSVDGGV
HHCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ELTLGAVQRIEQIQQAMQEVMAKMNEITLSTSEQHKATTMIAQSTEQINGRIVDSDDALQ
EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEECCHHHHH
TVRDTLSELSQSATSMRQLFSSFRV
HHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRSLRVKLIAFIALLLVVLGLVITVLVYTQMRNEIVRGVDNELGGTSKGYSALVSSWYKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHC
KVGVVIAANPLVGTPDPRQTLARLSQAGGFDMTYIGTAEHVMIRSDMKPQPQGYDPVARP
CCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEECCHHHEEEECCCCCCCCCCCCCCCH
WYQQAAASGNPGVSDPYVDFDTKKLVVTFVSPVKDGSALKAVVGGDIFIDDLVKTVLSVK
HHHHHHCCCCCCCCCCCCCCCCHHEEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHHHEE
LRGNGYAFLVDKGGKVIAHPDASLTLKPLSEKVPELTADRLGKLAADTTMQEVSIGGESK
ECCCCEEEEEECCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
LIEVQPVEGTNWLLGVVTDESVVTGPLNTLLLTVVGIGALCVVILIPVASLLLSRMLAGL
EEEEEECCCCCEEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRLRNAMLEISQGEGDLTRRIQVTGQDEIAETATAFNRFIGQLQKMFIAVKEEAERVTGG
HHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VESVTDTVDKVAHDSRQISDVSSSNAATLEEITVSISHIADAAREADGLVNHTGQVSSES
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCHH
AHGMQQISQEMNSTVDAVKGLSAMLSSLDQRSQQISGITNVIKDIADQTNLLALNAAIEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHH
ARAGEMGRGFAVVADEVRKLAERTGQATVEISGMVSTIREETSQAVSNMQRTVSSVDGGV
HHCCCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ELTLGAVQRIEQIQQAMQEVMAKMNEITLSTSEQHKATTMIAQSTEQINGRIVDSDDALQ
EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEECCHHHHH
TVRDTLSELSQSATSMRQLFSSFRV
HHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA