Click here to switch to the map view.

The map label for this gene is steB [H]

Identifier: 34499589

GI number: 34499589

Start: 4474510

End: 4474914

Strand: Direct

Name: steB [H]

Synonym: CV_4134

Alternate gene names: 34499589

Gene position: 4474510-4474914 (Clockwise)

Preceding gene: 34499588

Following gene: 34499590

Centisome position: 94.18

GC content: 68.89

Gene sequence:

>405_bases
ATGTACACCACCATCACCCGCCACGGCGCGCCTTTCGTGATGCAGACCGCCGACGGCCGCGGCTGCGCGTCCGGATGCAA
GGAAGCGTCACGCATGGCTCAGACGCTCAAGGGCGCGCGCAATGTGCACGGCGTCAATCTGACTTCCTGCTACGGCGCCA
ACGGCGGCGCGTTCTCCAACGCCCAGATGCTGGCCAACGCCACCGGCCTGCCGGTGAAAGGCTATTACGGCACCACCAAT
CTGGCGGGCGTTTCCAGGCACGGCGGCAAGCCCATTCCGTTCAAGACCTTCCGCCCGCAGGGGCCGGTCACCGCCGCGGT
CTGCGCCACCGGCAACCAGCTGCTGAGCGGCGTCGTGCAGGCCGGCATCCAGCTTCGCAACGCGCTGACGGGCCGCGCCG
GCTGA

Upstream 100 bases:

>100_bases
GGCCTCTTTTGCTTTTCGCGTGATCGTTTCCTGATAGCGCGCCCGCTTTCCCGCTCCGACAATAACCCGCCTCCTCATCC
CGTAAGCAAGGACGGCAAGC

Downstream 100 bases:

>100_bases
GAATGGACAATACGGCCCGGCTCGAACATATAATTCACTACCACTACCAGCCAGGGCCGTTCATGATCCGCCCTTCCCCC
GCTTTATTCGGCAGCTTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Salmonella translocated effector B [H]

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MYTTITRHGAPFVMQTADGRGCASGCKEASRMAQTLKGARNVHGVNLTSCYGANGGAFSNAQMLANATGLPVKGYYGTTN
LAGVSRHGGKPIPFKTFRPQGPVTAAVCATGNQLLSGVVQAGIQLRNALTGRAG

Sequences:

>Translated_134_residues
MYTTITRHGAPFVMQTADGRGCASGCKEASRMAQTLKGARNVHGVNLTSCYGANGGAFSNAQMLANATGLPVKGYYGTTN
LAGVSRHGGKPIPFKTFRPQGPVTAAVCATGNQLLSGVVQAGIQLRNALTGRAG
>Mature_134_residues
MYTTITRHGAPFVMQTADGRGCASGCKEASRMAQTLKGARNVHGVNLTSCYGANGGAFSNAQMLANATGLPVKGYYGTTN
LAGVSRHGGKPIPFKTFRPQGPVTAAVCATGNQLLSGVVQAGIQLRNALTGRAG

Specific function: Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Host cytoplasm. Note=Secreted via type III secretion systems 1 and 2 (SPI-1 and SPI-2 TTSS), and delivered into the host cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13700; Mature: 13700

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTTITRHGAPFVMQTADGRGCASGCKEASRMAQTLKGARNVHGVNLTSCYGANGGAFSN
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCC
AQMLANATGLPVKGYYGTTNLAGVSRHGGKPIPFKTFRPQGPVTAAVCATGNQLLSGVVQ
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHH
AGIQLRNALTGRAG
HHHHHHHHHCCCCC
>Mature Secondary Structure
MYTTITRHGAPFVMQTADGRGCASGCKEASRMAQTLKGARNVHGVNLTSCYGANGGAFSN
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCC
AQMLANATGLPVKGYYGTTNLAGVSRHGGKPIPFKTFRPQGPVTAAVCATGNQLLSGVVQ
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHH
AGIQLRNALTGRAG
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA