Click here to switch to the map view.

The map label for this gene is cbaC [H]

Identifier: 34499582

GI number: 34499582

Start: 4467101

End: 4468159

Strand: Reverse

Name: cbaC [H]

Synonym: CV_4127

Alternate gene names: 34499582

Gene position: 4468159-4467101 (Counterclockwise)

Preceding gene: 34499583

Following gene: 34499581

Centisome position: 94.05

GC content: 64.49

Gene sequence:

>1059_bases
ATGATAGTGATTCCTCCGATTACCGATCGCAAGATCCGTTTCGCCCTGGTCGGCTGCGGCCGCATCGCCAACAACCACTT
CGGCGCGCTGGAGAAGCACGCCGACCGCGCCGAGCTGATCGACGTCTGCGACATCGATCCGGCCGCGCTGAAGGCCGCCG
TCGAGCGCACCGGCGCCCGCGGCCATGCCAGCCTGACCGACATGCTGGCGCAGACCGACGCCGACATCGTCATCCTGACC
ACGCCGTCCGGCCTGCACCCGACCCAGAGCATCGAGTGCTCGGAAGCCGGTTTCCACGTGATGACCGAGAAGCCGATGGC
CACCCGCTGGGAGGATGGCCTGGAAATGGTGAAGGCGGCCGACAAGGCGAAGAAACACCTGTTCGTGGTCAAGCAGAACC
GCCGCAACGCGACGCTGCAGCTGTTGAAGCGCGCGATGCAGGAGAAGCGCTTCGGCCGCATCTACATGGTCAACGTCAAC
GTGTTCTGGACCCGTCCGCAAGAGTATTACGACGCGGCCGGCTGGCGCGGCACCTGGGAATTCGACGGCGGCGCCTTCAT
GAACCAGGCCAGCCACTACGTCGATCTGCTGGACTGGCTGATCGGCCCGGTGGAAAGCGTGCAGGCCTACACCGCCACGC
TGGCGCGCAACATCGAGGTGGAAGACACCGGCACCGTCAGCGTCAAGTGGCGCTCAGGCGCGCTGGGCAGCATGAACGTC
ACCATGCTGACCTATCCGAAGAACCTGGAAGGCAGCATCACCATTCTGGGCGAAAAGGGCTCGGTGCGCGTCGGCGGCGT
GGCCGTCAACGAGATCCAACACTGGGAATTCTCCGAGCCGCACGCGATGGACGAGGAAATCAAGGACGCGAGCTATGCGA
CCACCAGCGTCTACGGCTTCGGCCATCCGCTGTACTACGACAACGTGATCAAGACCATGCGCGGCGAAGCCACGCCGGAA
ACCGACGGCCGCGAGGGCCTGAAGTCGCTGGAGCTGCTGATCGCGATGTATTTGTCCGCCCGCGACGGCCGCCGCGTCAG
CCTGCCGCTGGATTACTAA

Upstream 100 bases:

>100_bases
GCAACGACCTGTACCACAGCCTGGCCTGGTACGAAGCCGGCGCGGTGCTGACCGAATATTTGAAGATACTGGTGTATTCA
GTACGTTACTGGACGTTCAG

Downstream 100 bases:

>100_bases
GGCGGACAGCATGTTCAGAAAGATAGTGGACGGCGCACTGTGGGGCCTGGGATTCTGGTTGGTCGGTGGCGTTTTGATGT
TGATATTTTCTTCTTTCGGG

Product: dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MIVIPPITDRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILT
TPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIYMVNVN
VFWTRPQEYYDAAGWRGTWEFDGGAFMNQASHYVDLLDWLIGPVESVQAYTATLARNIEVEDTGTVSVKWRSGALGSMNV
TMLTYPKNLEGSITILGEKGSVRVGGVAVNEIQHWEFSEPHAMDEEIKDASYATTSVYGFGHPLYYDNVIKTMRGEATPE
TDGREGLKSLELLIAMYLSARDGRRVSLPLDY

Sequences:

>Translated_352_residues
MIVIPPITDRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILT
TPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIYMVNVN
VFWTRPQEYYDAAGWRGTWEFDGGAFMNQASHYVDLLDWLIGPVESVQAYTATLARNIEVEDTGTVSVKWRSGALGSMNV
TMLTYPKNLEGSITILGEKGSVRVGGVAVNEIQHWEFSEPHAMDEEIKDASYATTSVYGFGHPLYYDNVIKTMRGEATPE
TDGREGLKSLELLIAMYLSARDGRRVSLPLDY
>Mature_352_residues
MIVIPPITDRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGARGHASLTDMLAQTDADIVILT
TPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIYMVNVN
VFWTRPQEYYDAAGWRGTWEFDGGAFMNQASHYVDLLDWLIGPVESVQAYTATLARNIEVEDTGTVSVKWRSGALGSMNV
TMLTYPKNLEGSITILGEKGSVRVGGVAVNEIQHWEFSEPHAMDEEIKDASYATTSVYGFGHPLYYDNVIKTMRGEATPE
TDGREGLKSLELLIAMYLSARDGRRVSLPLDY

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To P.putida PHT4 [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=367, Percent_Identity=23.7057220708447, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39184; Mature: 39184

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVIPPITDRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGAR
CEECCCCCCCEEEEEEEECCHHCCCCCCHHHHCCCHHHEEEECCCCHHHHHHHHHHCCCC
GHASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAA
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
DKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIYMVNVNVFWTRPQEYYDAAGWRGTWE
HHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCHHHHHCCCCCEEEE
FDGGAFMNQASHYVDLLDWLIGPVESVQAYTATLARNIEVEDTGTVSVKWRSGALGSMNV
ECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEECCCCEEEEEEECCCCCCCEE
TMLTYPKNLEGSITILGEKGSVRVGGVAVNEIQHWEFSEPHAMDEEIKDASYATTSVYGF
EEEEECCCCCCCEEEEECCCCEEECCEEEECCCCCCCCCCCCCHHHHHCCCCEEEEEEEC
GHPLYYDNVIKTMRGEATPETDGREGLKSLELLIAMYLSARDGRRVSLPLDY
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCC
>Mature Secondary Structure
MIVIPPITDRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGAR
CEECCCCCCCEEEEEEEECCHHCCCCCCHHHHCCCHHHEEEECCCCHHHHHHHHHHCCCC
GHASLTDMLAQTDADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAA
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHH
DKAKKHLFVVKQNRRNATLQLLKRAMQEKRFGRIYMVNVNVFWTRPQEYYDAAGWRGTWE
HHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCHHHHHCCCCCEEEE
FDGGAFMNQASHYVDLLDWLIGPVESVQAYTATLARNIEVEDTGTVSVKWRSGALGSMNV
ECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCEECCCCEEEEEEECCCCCCCEE
TMLTYPKNLEGSITILGEKGSVRVGGVAVNEIQHWEFSEPHAMDEEIKDASYATTSVYGF
EEEEECCCCCCCEEEEECCCCEEECCEEEECCCCCCCCCCCCCHHHHHCCCCEEEEEEEC
GHPLYYDNVIKTMRGEATPETDGREGLKSLELLIAMYLSARDGRRVSLPLDY
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9322760 [H]