| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499583
Identifier: 34499583
GI number: 34499583
Start: 4468156
End: 4468728
Strand: Reverse
Name: 34499583
Synonym: CV_4128
Alternate gene names: NA
Gene position: 4468728-4468156 (Counterclockwise)
Preceding gene: 34499584
Following gene: 34499582
Centisome position: 94.06
GC content: 67.54
Gene sequence:
>573_bases TTGCCCCCGCCGGGGGCGTGGCTGGCGGCGCTGGGCGCGCTCGCGCTGCTGGCCGTGCTGGCGCTGGTGCCGCTGATCCG CTATTCCAAGAGCTGGCTGGTGGCCGAAACGCCGCAGCCGCGGGCGGACTGGATCGTGGTGCTGGGCGGGGAGAGCGGCG AGCGGGTGATAGGCGCGGCGGAACTGTACCATCAGGGCCGCGCGCCTTTCGTCTTCGTCAGCGGCGAGGGCGATTGCCTG CTGATCGTCAGGCGGCTGCAGATGGCCGGCGTGCCGCGCGGGAAGATAGGCTATGAGTGCCTGTCCAAGAGCACATGGCA GAACGCCGTGCTCACCCGGCAGGCGCTGGCCTCGCGCCAGCCCAGGCGGATCACGCTGGTGACCTCGTGGTTCCATTCGC GGCGGGCGCTGGAGACTTTCCGCCAGGCCTGGCCGGAAGTGGAGTGGGGCATGCACATCGTGTACCCGGGCAACGACCTG TACCACAGCCTGGCCTGGTACGAAGCCGGCGCGGTGCTGACCGAATATTTGAAGATACTGGTGTATTCAGTACGTTACTG GACGTTCAGATGA
Upstream 100 bases:
>100_bases CGAGCTGATCAAGGCCAAGGCCCAACTGGTGGTGGACAGCCGCGGCAAGTACCTGGAGCCCGCCGAGCACATCGTCAAGG CCTAAGGCGTGTGCGGACGC
Downstream 100 bases:
>100_bases TAGTGATTCCTCCGATTACCGATCGCAAGATCCGTTTCGCCCTGGTCGGCTGCGGCCGCATCGCCAACAACCACTTCGGC GCGCTGGAGAAGCACGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MPPPGAWLAALGALALLAVLALVPLIRYSKSWLVAETPQPRADWIVVLGGESGERVIGAAELYHQGRAPFVFVSGEGDCL LIVRRLQMAGVPRGKIGYECLSKSTWQNAVLTRQALASRQPRRITLVTSWFHSRRALETFRQAWPEVEWGMHIVYPGNDL YHSLAWYEAGAVLTEYLKILVYSVRYWTFR
Sequences:
>Translated_190_residues MPPPGAWLAALGALALLAVLALVPLIRYSKSWLVAETPQPRADWIVVLGGESGERVIGAAELYHQGRAPFVFVSGEGDCL LIVRRLQMAGVPRGKIGYECLSKSTWQNAVLTRQALASRQPRRITLVTSWFHSRRALETFRQAWPEVEWGMHIVYPGNDL YHSLAWYEAGAVLTEYLKILVYSVRYWTFR >Mature_189_residues PPPGAWLAALGALALLAVLALVPLIRYSKSWLVAETPQPRADWIVVLGGESGERVIGAAELYHQGRAPFVFVSGEGDCLL IVRRLQMAGVPRGKIGYECLSKSTWQNAVLTRQALASRQPRRITLVTSWFHSRRALETFRQAWPEVEWGMHIVYPGNDLY HSLAWYEAGAVLTEYLKILVYSVRYWTFR
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21439; Mature: 21308
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPGAWLAALGALALLAVLALVPLIRYSKSWLVAETPQPRADWIVVLGGESGERVIGAA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCEEEHHH ELYHQGRAPFVFVSGEGDCLLIVRRLQMAGVPRGKIGYECLSKSTWQNAVLTRQALASRQ HHHHCCCCCEEEEECCCCEEHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCC PRRITLVTSWFHSRRALETFRQAWPEVEWGMHIVYPGNDLYHSLAWYEAGAVLTEYLKIL CCEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH VYSVRYWTFR HHHHHHEECC >Mature Secondary Structure PPPGAWLAALGALALLAVLALVPLIRYSKSWLVAETPQPRADWIVVLGGESGERVIGAA CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCEEEHHH ELYHQGRAPFVFVSGEGDCLLIVRRLQMAGVPRGKIGYECLSKSTWQNAVLTRQALASRQ HHHHCCCCCEEEEECCCCEEHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCC PRRITLVTSWFHSRRALETFRQAWPEVEWGMHIVYPGNDLYHSLAWYEAGAVLTEYLKIL CCEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHH VYSVRYWTFR HHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA