| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is wzx
Identifier: 34499578
GI number: 34499578
Start: 4463770
End: 4465041
Strand: Reverse
Name: wzx
Synonym: CV_4123
Alternate gene names: NA
Gene position: 4465041-4463770 (Counterclockwise)
Preceding gene: 34499579
Following gene: 34499577
Centisome position: 93.98
GC content: 67.61
Gene sequence:
>1272_bases ATGGTGTCGTTGTCGTCGCTGCGCGTGCCCAAAAGCGGTTTCATCCGCCACATCATCACCCTGGTGACCGGGGCGGCGGT GGCCCAGGTGGTGCCGCTGCTGGCCTCGCCGCTGATCACCCGGCTGTATGATCCGCACGAGGTCGGCATCCAGGCGGTGT ACGTGTCGTGGATGTCCACGCTGGCGGTGCTGGCCACCGCCCGCTACGAGATGGCCATCGTGCTCCCGGCCGAGGAGAAG CGCGCCGACAACCTGATGGGGCTGTCGCTGCTGTGCGCCAGCGGACTGGCGCTATTGGTGGGGCTGGTGGTGCTGATGGG CGGCCATTCCCACATCGCGGCCCATCTTGGCGCGCCGGAGCTGGAGCCCTGGCTGGTGCTGCTGCCGCTGTCGGTGTGGC TGGCCGGCCTGATGCAGGCCTGGACCAACTGGAACAACCGCCACCGCCGCTACCAGGCCAACGCCAACGGCCGCATGACG CAGTCCTTCGGCATGGCCGGCACCCAGGTGCTGGCCGGCTGGCTGGGCGCTGGCGCCGGCGGCCTGATCCTGGGCCAGCT GGCCGGCCAGATCGGCTCGCTGCTGGCGCAAAGCTGGCAGGATCTGAAAGCCCGCTTCGGCTGGCGGCGCGGCATCAGCC GCCAGGGCATGCGCGAGGCGGCGCTCGCCTACATCGAGTTTCCCAAGATCAACGCGCCGCACGCCTTGAGCACGGCGCTG CTGGACTCCGCCACGCTGGCGGTGCTAACCGTGCTGGCCAGCACCTCCGCCGTCGGCTTCTACGGCCTGATGATGCGGGT GCTGAAGCTGCCGGCGGCGCTGATCGGCCAGGCGGTGGCCCAGGTGGCCTACCGCGAGCTGGCGGAGGCGCGCAATCTGG GCAAGCCGCTGCGCCCCATCCTGCGCAAGATGATGCTGACGCTGTTCGGCATGTCGCTGTTTCCCTTCCTGGTGATCCAG ATCTTCGGCGAGCCGCTGTTCACCCTGGTGTTCGGCCGCAACTGGGCCGACGCCGGCCGTTACGCCGAGGCGATGTCGCT GTACATCCTGTTCCATTTCGTCGCCTCGCCGCTGGGCATGGTGCCGCCGGTGATCAATCGCCAGCGTTTCGCGTTTTTCC TGTCCCTGGTGCAGGCCGTGCTGTTCCTGGGGTCGCTGTGGCTGGGCTTCCATCTCTGGCAGGATGCGGTGCCTACTTTC CAGCTGGTCTCGGTAGTGATGGCCGGCTACTTCCTCGCTTATTTCACCTGGCTTTATAAGGCGGCACGATGA
Upstream 100 bases:
>100_bases GCCGGCAAGCGCGTGATGAGCCTGCCGATGCATCCCTTCCTGACGGAAGACGCGCAGGACGCCATCGTCGCCGCGGTGAA GAAGGCGCTGGGCTGAGAGG
Downstream 100 bases:
>100_bases ACTGGAATGGACTGCTCAGCCGTATCCGCTTTCGGCTGTCGGCATGGGTGCGGCCGCGCATGGTATACGGCTTCCAGCGC GGCGACGGCGTGTTCCTGAA
Product: O-antigen translocase
Products: NA
Alternate protein names: O-Antigen Translocase; O-Antigen And Teichoic Acid-Like Export Protein
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MVSLSSLRVPKSGFIRHIITLVTGAAVAQVVPLLASPLITRLYDPHEVGIQAVYVSWMSTLAVLATARYEMAIVLPAEEK RADNLMGLSLLCASGLALLVGLVVLMGGHSHIAAHLGAPELEPWLVLLPLSVWLAGLMQAWTNWNNRHRRYQANANGRMT QSFGMAGTQVLAGWLGAGAGGLILGQLAGQIGSLLAQSWQDLKARFGWRRGISRQGMREAALAYIEFPKINAPHALSTAL LDSATLAVLTVLASTSAVGFYGLMMRVLKLPAALIGQAVAQVAYRELAEARNLGKPLRPILRKMMLTLFGMSLFPFLVIQ IFGEPLFTLVFGRNWADAGRYAEAMSLYILFHFVASPLGMVPPVINRQRFAFFLSLVQAVLFLGSLWLGFHLWQDAVPTF QLVSVVMAGYFLAYFTWLYKAAR
Sequences:
>Translated_423_residues MVSLSSLRVPKSGFIRHIITLVTGAAVAQVVPLLASPLITRLYDPHEVGIQAVYVSWMSTLAVLATARYEMAIVLPAEEK RADNLMGLSLLCASGLALLVGLVVLMGGHSHIAAHLGAPELEPWLVLLPLSVWLAGLMQAWTNWNNRHRRYQANANGRMT QSFGMAGTQVLAGWLGAGAGGLILGQLAGQIGSLLAQSWQDLKARFGWRRGISRQGMREAALAYIEFPKINAPHALSTAL LDSATLAVLTVLASTSAVGFYGLMMRVLKLPAALIGQAVAQVAYRELAEARNLGKPLRPILRKMMLTLFGMSLFPFLVIQ IFGEPLFTLVFGRNWADAGRYAEAMSLYILFHFVASPLGMVPPVINRQRFAFFLSLVQAVLFLGSLWLGFHLWQDAVPTF QLVSVVMAGYFLAYFTWLYKAAR >Mature_423_residues MVSLSSLRVPKSGFIRHIITLVTGAAVAQVVPLLASPLITRLYDPHEVGIQAVYVSWMSTLAVLATARYEMAIVLPAEEK RADNLMGLSLLCASGLALLVGLVVLMGGHSHIAAHLGAPELEPWLVLLPLSVWLAGLMQAWTNWNNRHRRYQANANGRMT QSFGMAGTQVLAGWLGAGAGGLILGQLAGQIGSLLAQSWQDLKARFGWRRGISRQGMREAALAYIEFPKINAPHALSTAL LDSATLAVLTVLASTSAVGFYGLMMRVLKLPAALIGQAVAQVAYRELAEARNLGKPLRPILRKMMLTLFGMSLFPFLVIQ IFGEPLFTLVFGRNWADAGRYAEAMSLYILFHFVASPLGMVPPVINRQRFAFFLSLVQAVLFLGSLWLGFHLWQDAVPTF QLVSVVMAGYFLAYFTWLYKAAR
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46220; Mature: 46220
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSLSSLRVPKSGFIRHIITLVTGAAVAQVVPLLASPLITRLYDPHEVGIQAVYVSWMST CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LAVLATARYEMAIVLPAEEKRADNLMGLSLLCASGLALLVGLVVLMGGHSHIAAHLGAPE HHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC LEPWLVLLPLSVWLAGLMQAWTNWNNRHRRYQANANGRMTQSFGMAGTQVLAGWLGAGAG CCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCHHHHCCHHHHHHHHHHCCCCC GLILGQLAGQIGSLLAQSWQDLKARFGWRRGISRQGMREAALAYIEFPKINAPHALSTAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH LDSATLAVLTVLASTSAVGFYGLMMRVLKLPAALIGQAVAQVAYRELAEARNLGKPLRPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LRKMMLTLFGMSLFPFLVIQIFGEPLFTLVFGRNWADAGRYAEAMSLYILFHFVASPLGM HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHC VPPVINRQRFAFFLSLVQAVLFLGSLWLGFHLWQDAVPTFQLVSVVMAGYFLAYFTWLYK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AAR HCC >Mature Secondary Structure MVSLSSLRVPKSGFIRHIITLVTGAAVAQVVPLLASPLITRLYDPHEVGIQAVYVSWMST CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LAVLATARYEMAIVLPAEEKRADNLMGLSLLCASGLALLVGLVVLMGGHSHIAAHLGAPE HHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCC LEPWLVLLPLSVWLAGLMQAWTNWNNRHRRYQANANGRMTQSFGMAGTQVLAGWLGAGAG CCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCHHHHCCHHHHHHHHHHCCCCC GLILGQLAGQIGSLLAQSWQDLKARFGWRRGISRQGMREAALAYIEFPKINAPHALSTAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHH LDSATLAVLTVLASTSAVGFYGLMMRVLKLPAALIGQAVAQVAYRELAEARNLGKPLRPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LRKMMLTLFGMSLFPFLVIQIFGEPLFTLVFGRNWADAGRYAEAMSLYILFHFVASPLGM HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCHHHC VPPVINRQRFAFFLSLVQAVLFLGSLWLGFHLWQDAVPTFQLVSVVMAGYFLAYFTWLYK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AAR HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA