| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is wbjE [H]
Identifier: 34499574
GI number: 34499574
Start: 4459659
End: 4460888
Strand: Reverse
Name: wbjE [H]
Synonym: CV_4119
Alternate gene names: 34499574
Gene position: 4460888-4459659 (Counterclockwise)
Preceding gene: 34499575
Following gene: 34499573
Centisome position: 93.89
GC content: 65.53
Gene sequence:
>1230_bases ATGAGAATACTGTATATCAACCATTACGCCGGCAGCCCGCGCCACGGCATGGAATTCCGCCCCTACTACCTGGCGCGGGA ATGGGTAAAAGCCGGGCATGAAGTGAACATGCTGGCGGCCGATGTGTCGCACCTGCGCCAGACCCATCCCCAGGTGGACG GCAAGTACCGCGACGAGGACATCGACGGCATCCGCTACACCTGGTGCAAGACGCGGCCATACAGCGGCAACGGCGTCGGC CGGGTGCTTAACATCTTCAGTTTCCTGGCCAAGGTGATGGGCCTGTCGCGCCGCTACCTGAAGGAATGGCAGCCGGACGT GGTGATCGCCTCGTCCACCTATCCGCTGGATACCGTGCCGGCGGCGTGGATCGCCGGCAAGACCGGCGCCCGGCTGGTGT ACGAGGTGCACGACCTGTGGCCGCTGACGCCGGTGGAAGTGGGCGGCATGTCGCCCAAGCACCCGTTCATCCGCTTGCTG CAATGGGCGGAGGATTTCGGCTACAAGCGCGCCGACACCGTGGTGTCGATGCTGCCCTGCGCCAGGGACTACATGATGGC GCACGGCATGGCGGCGGAAAAATACGCGGTCATCCCCAATGGCGTGGACGTCAGCGAATGGCAGGGCGAGACGCTGCCGC TGTCGGCCGAGCACCGGATGCGGTTGGCGGAGCTGAAGTCCCATGGCCGCTTCATCGTCGGCTACGCCGGCGGCCATGGC CTGGCCAACGCGCTGGATTATCTGTTGGAAGCCGCGGCCTTGATGCGCGACGCGCCGGTGACTTTCGTGCTGGTGGGCGA CGGTCCGGACAAGCAGGCGCTGGTGTCGCGCGCCGCGGAACTGAAGCTGGACAACGTGATGTTCCTGCCGTCCATCGCCA AGCGCAGCGTGCCCGCCTTCCTGGCCGAGTGCGACGCGCTGTACATCGGCTGGCGCAAGCTGCCGATCTACCGCTTCGGC ATCAACCCGAACAAGCTGTTCGATTACATGATGGCGGGCAAGCCGGTGATCCACTCGGTGGAGGCCGGCAACGATATGGT CAAGGATGCCGGCGCCGGCTTGAGCATAGGCGTGGAAGACCCGGCCGTCATCGCCGACGCGGTCAAGCGCATGGCGGTGC TGCCCTTGGCCGAGCGCGAGACGATGGGCGCGGCCGGCAAGGCCTACGTACTGGCCAACCATGATTACGCGGTGCTGGCG CGGCGCTTTCTGGCGGCGGTGAAGCTGTGA
Upstream 100 bases:
>100_bases CCACACGGAAAGACATGGAAGCATCGCTGTTGAAGTCTGGACAGCTGCAGTTCAAGCCGCACTTGAGTTTTGTCCGTGTT GTTCCGTGGCTAATTACAAG
Downstream 100 bases:
>100_bases TTTGGGCGTAGGGCGGAAGCCCCCGTTTTTTGGGGGCGTTCCGCCACGAGGCGATCGCCCTGTCGATATCGTGAGGGTTT TAGCGGCGGAACGCCCCTGT
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MRILYINHYAGSPRHGMEFRPYYLAREWVKAGHEVNMLAADVSHLRQTHPQVDGKYRDEDIDGIRYTWCKTRPYSGNGVG RVLNIFSFLAKVMGLSRRYLKEWQPDVVIASSTYPLDTVPAAWIAGKTGARLVYEVHDLWPLTPVEVGGMSPKHPFIRLL QWAEDFGYKRADTVVSMLPCARDYMMAHGMAAEKYAVIPNGVDVSEWQGETLPLSAEHRMRLAELKSHGRFIVGYAGGHG LANALDYLLEAAALMRDAPVTFVLVGDGPDKQALVSRAAELKLDNVMFLPSIAKRSVPAFLAECDALYIGWRKLPIYRFG INPNKLFDYMMAGKPVIHSVEAGNDMVKDAGAGLSIGVEDPAVIADAVKRMAVLPLAERETMGAAGKAYVLANHDYAVLA RRFLAAVKL
Sequences:
>Translated_409_residues MRILYINHYAGSPRHGMEFRPYYLAREWVKAGHEVNMLAADVSHLRQTHPQVDGKYRDEDIDGIRYTWCKTRPYSGNGVG RVLNIFSFLAKVMGLSRRYLKEWQPDVVIASSTYPLDTVPAAWIAGKTGARLVYEVHDLWPLTPVEVGGMSPKHPFIRLL QWAEDFGYKRADTVVSMLPCARDYMMAHGMAAEKYAVIPNGVDVSEWQGETLPLSAEHRMRLAELKSHGRFIVGYAGGHG LANALDYLLEAAALMRDAPVTFVLVGDGPDKQALVSRAAELKLDNVMFLPSIAKRSVPAFLAECDALYIGWRKLPIYRFG INPNKLFDYMMAGKPVIHSVEAGNDMVKDAGAGLSIGVEDPAVIADAVKRMAVLPLAERETMGAAGKAYVLANHDYAVLA RRFLAAVKL >Mature_409_residues MRILYINHYAGSPRHGMEFRPYYLAREWVKAGHEVNMLAADVSHLRQTHPQVDGKYRDEDIDGIRYTWCKTRPYSGNGVG RVLNIFSFLAKVMGLSRRYLKEWQPDVVIASSTYPLDTVPAAWIAGKTGARLVYEVHDLWPLTPVEVGGMSPKHPFIRLL QWAEDFGYKRADTVVSMLPCARDYMMAHGMAAEKYAVIPNGVDVSEWQGETLPLSAEHRMRLAELKSHGRFIVGYAGGHG LANALDYLLEAAALMRDAPVTFVLVGDGPDKQALVSRAAELKLDNVMFLPSIAKRSVPAFLAECDALYIGWRKLPIYRFG INPNKLFDYMMAGKPVIHSVEAGNDMVKDAGAGLSIGVEDPAVIADAVKRMAVLPLAERETMGAAGKAYVLANHDYAVLA RRFLAAVKL
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
Organism=Escherichia coli, GI1788363, Length=394, Percent_Identity=23.0964467005076, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 45362; Mature: 45362
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILYINHYAGSPRHGMEFRPYYLAREWVKAGHEVNMLAADVSHLRQTHPQVDGKYRDED CEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCCCCC IDGIRYTWCKTRPYSGNGVGRVLNIFSFLAKVMGLSRRYLKEWQPDVVIASSTYPLDTVP CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC AAWIAGKTGARLVYEVHDLWPLTPVEVGGMSPKHPFIRLLQWAEDFGYKRADTVVSMLPC HHHHCCCCCCEEEEEEHHCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH ARDYMMAHGMAAEKYAVIPNGVDVSEWQGETLPLSAEHRMRLAELKSHGRFIVGYAGGHG HHHHHHHCCCCCCCEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCH LANALDYLLEAAALMRDAPVTFVLVGDGPDKQALVSRAAELKLDNVMFLPSIAKRSVPAF HHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHH LAECDALYIGWRKLPIYRFGINPNKLFDYMMAGKPVIHSVEAGNDMVKDAGAGLSIGVED HHHCCEEEEEEEECEEEEECCCHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCEECCCC PAVIADAVKRMAVLPLAERETMGAAGKAYVLANHDYAVLARRFLAAVKL HHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCC >Mature Secondary Structure MRILYINHYAGSPRHGMEFRPYYLAREWVKAGHEVNMLAADVSHLRQTHPQVDGKYRDED CEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCCCCCCC IDGIRYTWCKTRPYSGNGVGRVLNIFSFLAKVMGLSRRYLKEWQPDVVIASSTYPLDTVP CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC AAWIAGKTGARLVYEVHDLWPLTPVEVGGMSPKHPFIRLLQWAEDFGYKRADTVVSMLPC HHHHCCCCCCEEEEEEHHCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH ARDYMMAHGMAAEKYAVIPNGVDVSEWQGETLPLSAEHRMRLAELKSHGRFIVGYAGGHG HHHHHHHCCCCCCCEEECCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCH LANALDYLLEAAALMRDAPVTFVLVGDGPDKQALVSRAAELKLDNVMFLPSIAKRSVPAF HHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHH LAECDALYIGWRKLPIYRFGINPNKLFDYMMAGKPVIHSVEAGNDMVKDAGAGLSIGVED HHHCCEEEEEEEECEEEEECCCHHHHHHHHHCCCCCEEEECCCCHHHHHCCCCCEECCCC PAVIADAVKRMAVLPLAERETMGAAGKAYVLANHDYAVLARRFLAAVKL HHHHHHHHHHHHHCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10400585; 10828401; 12057956 [H]