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The map label for this gene is spsC [C]

Identifier: 34499573

GI number: 34499573

Start: 4458292

End: 4459506

Strand: Reverse

Name: spsC [C]

Synonym: CV_4118

Alternate gene names: 34499573

Gene position: 4459506-4458292 (Counterclockwise)

Preceding gene: 34499574

Following gene: 34499572

Centisome position: 93.86

GC content: 65.1

Gene sequence:

>1215_bases
ATGGACATGGAGGCGGCCGAGCGCGGCCGCGCAAAGACGAGAGACCGAGAAATGAGCGAAACAAAGTTCCTGCCGTTCGC
CTTGCCGGATATCGGCGAGGAAGAGATCAACGAAGTGGTCGATGCTTTGAGGTCGGGCTGGGTGACCACCGGTCCCAAGA
CCAAGCAGTTCGAGGCCGATTTCGCCGCCTTCCTCGGCGGCGAGGTCGAGGCGATCGCGGTCAACTCCGCCACCGCCGGC
CTGCATTTGGCGCTGGAGGCGATCGGCATCCGTGAGGGGGACGAAGTGATCGTGCCGTCCTACACCTTCACCGCCACCGC
CGAGGTGGTGCGCTATCTGGGCGCGCACCCGGTGTGCGTGGACGTGGACGGCGCCACCTTCAACATCCGCCCGGATGCGA
TCCGCGCCGCGATCACTGATAAGACCCGCGCCATCATCCCGGTGCATTTCGCCGGCCTGGCCTGCGACATGGACGAGATC
ATCGCCATCGCCCGCGAGCATGGGCTGAAGATCGTCGAGGACGCCGCCCACGCCATGCCCACCTACTACAAGGGCAAGCT
GGTGGGCACGCTGGATTCAGACGTCACCGTGTTCAGCTTCTACGCCAACAAGACCATGACCACCGGCGAGGGCGGCATGG
TGGTGTCCAGGAACAAGGACATCATCGCCCGCTGCAAGGTGATGCGCCTGCATGGCATCAGCCGCGACGCCTTCGACCGC
TACGTGTCCAAGACCCCGGCCTGGTTCTACGAAGTGGTCGCGCCTGGCTACAAGTACAATATGCCGGACACCGCCGCGGC
GATGGGCATCCACCAGTTGAAGAAGATCCGTGGCTTCTATGAAAAGCGCGAAGTCATGGCCCAGCGCTTCGACCGCGAGC
TGGCCGATCTGCCGCTGATCCTGCCGGCGCGCGCCAAGGACGAGGGCAGCAACCACGCCTGGCACCTGTACCCGGTGCGG
ATCAAGCCGGAAGCCGGCATCAGCCGCGACGACTTCATCGCCAGGATGGCGGAAAAGGGCATCGGCTGCTCGGTGCATTT
CATCCCGCTGCACCGCCAGCCGGTATGGCGCGACGGCTACCAGCTGGCGCGCGAGCAATTCCCGGTGGCCGACGCCGCTT
TCGAGGCCGAAGTGACGCTGCCGCTCTACACCCGGATGACGGACGACGACCAGACCCGCGTCATCGCCGCGGTGCGCGAG
ATTCTGGGCGCATGA

Upstream 100 bases:

>100_bases
GATCGCCCTGTCGATATCGTGAGGGTTTTAGCGGCGGAACGCCCCTGTGGGGCTTCCGCCCTACAGAAGATTTTGCGAGC
CGCGCGCCAGGCGCGCGGCG

Downstream 100 bases:

>100_bases
GCGAGCGGCTGGAAAAAAAGGGCGGCGAATTGCTGCCGCCCTGCTGCCGGCGGCGCCGCCACGGCTCGCGGCTGTTGAAG
CGGCTGTTCGACATCGTGGC

Product: spore coat polysaccharide biosynthesis protein C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MDMEAAERGRAKTRDREMSETKFLPFALPDIGEEEINEVVDALRSGWVTTGPKTKQFEADFAAFLGGEVEAIAVNSATAG
LHLALEAIGIREGDEVIVPSYTFTATAEVVRYLGAHPVCVDVDGATFNIRPDAIRAAITDKTRAIIPVHFAGLACDMDEI
IAIAREHGLKIVEDAAHAMPTYYKGKLVGTLDSDVTVFSFYANKTMTTGEGGMVVSRNKDIIARCKVMRLHGISRDAFDR
YVSKTPAWFYEVVAPGYKYNMPDTAAAMGIHQLKKIRGFYEKREVMAQRFDRELADLPLILPARAKDEGSNHAWHLYPVR
IKPEAGISRDDFIARMAEKGIGCSVHFIPLHRQPVWRDGYQLAREQFPVADAAFEAEVTLPLYTRMTDDDQTRVIAAVRE
ILGA

Sequences:

>Translated_404_residues
MDMEAAERGRAKTRDREMSETKFLPFALPDIGEEEINEVVDALRSGWVTTGPKTKQFEADFAAFLGGEVEAIAVNSATAG
LHLALEAIGIREGDEVIVPSYTFTATAEVVRYLGAHPVCVDVDGATFNIRPDAIRAAITDKTRAIIPVHFAGLACDMDEI
IAIAREHGLKIVEDAAHAMPTYYKGKLVGTLDSDVTVFSFYANKTMTTGEGGMVVSRNKDIIARCKVMRLHGISRDAFDR
YVSKTPAWFYEVVAPGYKYNMPDTAAAMGIHQLKKIRGFYEKREVMAQRFDRELADLPLILPARAKDEGSNHAWHLYPVR
IKPEAGISRDDFIARMAEKGIGCSVHFIPLHRQPVWRDGYQLAREQFPVADAAFEAEVTLPLYTRMTDDDQTRVIAAVRE
ILGA
>Mature_404_residues
MDMEAAERGRAKTRDREMSETKFLPFALPDIGEEEINEVVDALRSGWVTTGPKTKQFEADFAAFLGGEVEAIAVNSATAG
LHLALEAIGIREGDEVIVPSYTFTATAEVVRYLGAHPVCVDVDGATFNIRPDAIRAAITDKTRAIIPVHFAGLACDMDEI
IAIAREHGLKIVEDAAHAMPTYYKGKLVGTLDSDVTVFSFYANKTMTTGEGGMVVSRNKDIIARCKVMRLHGISRDAFDR
YVSKTPAWFYEVVAPGYKYNMPDTAAAMGIHQLKKIRGFYEKREVMAQRFDRELADLPLILPARAKDEGSNHAWHLYPVR
IKPEAGISRDDFIARMAEKGIGCSVHFIPLHRQPVWRDGYQLAREQFPVADAAFEAEVTLPLYTRMTDDDQTRVIAAVRE
ILGA

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=388, Percent_Identity=41.4948453608247, Blast_Score=284, Evalue=8e-78,
Organism=Escherichia coli, GI2367285, Length=382, Percent_Identity=32.7225130890052, Blast_Score=165, Evalue=4e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 44827; Mature: 44827

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMEAAERGRAKTRDREMSETKFLPFALPDIGEEEINEVVDALRSGWVTTGPKTKQFEAD
CCCCHHHCCCCCCCCCHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCEECCCCCCCHHHH
FAAFLGGEVEAIAVNSATAGLHLALEAIGIREGDEVIVPSYTFTATAEVVRYLGAHPVCV
HHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCCCEEECCEEHHHHHHHHHHHCCCCEEE
DVDGATFNIRPDAIRAAITDKTRAIIPVHFAGLACDMDEIIAIAREHGLKIVEDAAHAMP
ECCCCEEEECHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHCC
TYYKGKLVGTLDSDVTVFSFYANKTMTTGEGGMVVSRNKDIIARCKVMRLHGISRDAFDR
CEECCEEEEECCCCEEEEEEEECCEEECCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHH
YVSKTPAWFYEVVAPGYKYNMPDTAAAMGIHQLKKIRGFYEKREVMAQRFDRELADLPLI
HHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
LPARAKDEGSNHAWHLYPVRIKPEAGISRDDFIARMAEKGIGCSVHFIPLHRQPVWRDGY
EECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHH
QLAREQFPVADAAFEAEVTLPLYTRMTDDDQTRVIAAVREILGA
HHHHHHCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MDMEAAERGRAKTRDREMSETKFLPFALPDIGEEEINEVVDALRSGWVTTGPKTKQFEAD
CCCCHHHCCCCCCCCCHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCEECCCCCCCHHHH
FAAFLGGEVEAIAVNSATAGLHLALEAIGIREGDEVIVPSYTFTATAEVVRYLGAHPVCV
HHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCCCEEECCEEHHHHHHHHHHHCCCCEEE
DVDGATFNIRPDAIRAAITDKTRAIIPVHFAGLACDMDEIIAIAREHGLKIVEDAAHAMP
ECCCCEEEECHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHCC
TYYKGKLVGTLDSDVTVFSFYANKTMTTGEGGMVVSRNKDIIARCKVMRLHGISRDAFDR
CEECCEEEEECCCCEEEEEEEECCEEECCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHH
YVSKTPAWFYEVVAPGYKYNMPDTAAAMGIHQLKKIRGFYEKREVMAQRFDRELADLPLI
HHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
LPARAKDEGSNHAWHLYPVRIKPEAGISRDDFIARMAEKGIGCSVHFIPLHRQPVWRDGY
EECCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHH
QLAREQFPVADAAFEAEVTLPLYTRMTDDDQTRVIAAVREILGA
HHHHHHCCCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]