| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34499529
Identifier: 34499529
GI number: 34499529
Start: 4407737
End: 4408372
Strand: Reverse
Name: 34499529
Synonym: CV_4074
Alternate gene names: NA
Gene position: 4408372-4407737 (Counterclockwise)
Preceding gene: 34499530
Following gene: 34499528
Centisome position: 92.79
GC content: 71.23
Gene sequence:
>636_bases ATGCTGTTGCTGTGCCTGCCGGCGCTGGCGGAAACCACGCTGCGCGCCGGCGTGGCCAACGACAGCGGCGAATCGCTGCG CACGACCGTGGACGGCGGCCTGGCGCTGGCCTATCGCGACGCGCTGGCCTTGATCGCCCAGCAAAGCGGCATCCGCTTCC AGCTCGACTACTACCCCTCGCAGCGTCTGGAGCAGCTGTTCCAGGTCGGCAAGCTGGACGTCGAGGTCGGCGTCCACCCC TCCTGGCGCGCGCTGTCGCCGGTGGCGGGCTTTTACACCCAGCCTGTCGCCGACGAGGAATTCGTGCTGTGCCTGCCGCC GGGCAAGGGCAAGCGGCCCGCGCCGCTGTCTTCGCTCAAGGGCGGCACCATCGGCACGCTGCTGGGCCAGCGCTACCCGT CGCTGGAAGCCGCGTTCGGCAGCCGCAAGCTGCTGCGCGACGGCTCTGCCAACGAGGACGAGATGCTGGACAAGCTGCGC CAGGGACGCGTCCAGGCCGTGGTGCTGGAGCGCCGCCGCGCGCAGTACTGGAGCCGGCGCGACGAGGGCGGCGCTGTCTG CCGGGCGAATCGGTGGGCAGCCTGCCGGTGTCGCTGCGGCTGCACCCGCAATACCGCGAGCTGTTGCCCAGGCTGA
Upstream 100 bases:
>100_bases GTCGAGGCCAACAACAAATATTTTGCGCGCATCAAGATACTGTCCACCATCTGCGACGCGCTGGAGGCCAGGCTGGGTGA ATAGGCTGTGGTGGGGGCTG
Downstream 100 bases:
>100_bases ACCAGGCGATCCAGCAACTGAACGAGCAGGGCCGCTTGCGGCCGCTGTTCGCCCGCCGCTGAGCGCGCCGCCGTTTTTCC GGAAGTCCCATCGATGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MLLLCLPALAETTLRAGVANDSGESLRTTVDGGLALAYRDALALIAQQSGIRFQLDYYPSQRLEQLFQVGKLDVEVGVHP SWRALSPVAGFYTQPVADEEFVLCLPPGKGKRPAPLSSLKGGTIGTLLGQRYPSLEAAFGSRKLLRDGSANEDEMLDKLR QGRVQAVVLERRRAQYWSRRDEGGAVCRANRWAACRCRCGCTRNTASCCPG
Sequences:
>Translated_211_residues MLLLCLPALAETTLRAGVANDSGESLRTTVDGGLALAYRDALALIAQQSGIRFQLDYYPSQRLEQLFQVGKLDVEVGVHP SWRALSPVAGFYTQPVADEEFVLCLPPGKGKRPAPLSSLKGGTIGTLLGQRYPSLEAAFGSRKLLRDGSANEDEMLDKLR QGRVQAVVLERRRAQYWSRRDEGGAVCRANRWAACRCRCGCTRNTASCCPG >Mature_211_residues MLLLCLPALAETTLRAGVANDSGESLRTTVDGGLALAYRDALALIAQQSGIRFQLDYYPSQRLEQLFQVGKLDVEVGVHP SWRALSPVAGFYTQPVADEEFVLCLPPGKGKRPAPLSSLKGGTIGTLLGQRYPSLEAAFGSRKLLRDGSANEDEMLDKLR QGRVQAVVLERRRAQYWSRRDEGGAVCRANRWAACRCRCGCTRNTASCCPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23002; Mature: 23002
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLCLPALAETTLRAGVANDSGESLRTTVDGGLALAYRDALALIAQQSGIRFQLDYYPS CEEEECHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCH QRLEQLFQVGKLDVEVGVHPSWRALSPVAGFYTQPVADEEFVLCLPPGKGKRPAPLSSLK HHHHHHHHHCCEEEEECCCCCCHHHCCHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHCC GGTIGTLLGQRYPSLEAAFGSRKLLRDGSANEDEMLDKLRQGRVQAVVLERRRAQYWSRR CCHHHHHHHCCCCCHHHHHCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCC DEGGAVCRANRWAACRCRCGCTRNTASCCPG CCCCCEEECCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MLLLCLPALAETTLRAGVANDSGESLRTTVDGGLALAYRDALALIAQQSGIRFQLDYYPS CEEEECHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCH QRLEQLFQVGKLDVEVGVHPSWRALSPVAGFYTQPVADEEFVLCLPPGKGKRPAPLSSLK HHHHHHHHHCCEEEEECCCCCCHHHCCHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHCC GGTIGTLLGQRYPSLEAAFGSRKLLRDGSANEDEMLDKLRQGRVQAVVLERRRAQYWSRR CCHHHHHHHCCCCCHHHHHCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCC DEGGAVCRANRWAACRCRCGCTRNTASCCPG CCCCCEEECCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA