| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is apaH
Identifier: 34499522
GI number: 34499522
Start: 4397963
End: 4398796
Strand: Reverse
Name: apaH
Synonym: CV_4067
Alternate gene names: 34499522
Gene position: 4398796-4397963 (Counterclockwise)
Preceding gene: 34499524
Following gene: 34499521
Centisome position: 92.59
GC content: 64.15
Gene sequence:
>834_bases ATGGCCATTTACGCAATCGGCGACATCCAGGGCTGCTTCGAGCCGTTCCAGCAGCTGCTGAGGCTGATCGATTTCAATCC CGGCAAGGACACGCTGTGGCTGACCGGCGACCTGGTCAACCGCGGACCGCAATCGCTGGAGGTGTTGCGCTGGGTGTTCC AGCATCAGGACCAGGTGGAGATGGTGCTGGGCAATCATGATCTGCACCTGCTGGCGGTGTCGGAAGGCTTCGGCAAGATC CACCGCGACGACACCATAGACGATGTGCTCAACGCGGCCGACGGCAAGGTGCTGCTGGACTGGCTGCGTTGCCAGCCGAT GATGCTGGAGGGGCACGGCTACGCGATGGTGCACGCCGGGCTGCTGCCGGAATGGACGATATCCAAGGCGCTCAGGCTGG CGGAGGAGGTCGAGTTCGGCCTGTCCGGCACCCGCTACCGGGAATTCCTCGGCCGTTTGTACGGCAACAAGCCGACGCGC TGGACCGACGATCTGAAAGGCGTGGACCGGCTGCGGCTGATCGTCAACGTGATGACGCGGATGCGCTTCCTGACCCGCGA CGGCGAGCTGGATCTCAGCTACAAGGGCGAGCTGGAAGGCGCGCCGGCCAATCTGGTGCCCTGGTTCGAGGCGCCGAACC GCCGCCATGGCGGCACGCCCATCGTCTGCGGGCACTGGTCGGCGCTGGGCGTGCATCTGGACGAAGACATCCTGGCGATC GATTCCGGCTGTTTATGGGGCGGCAGCCTGTCGGCGCTCCGGCTGGATGACAAACAGCTTTTCTCGCTGCCTTGCCAGGC TTACCGCGAAATCGCGCTTGCAACAGGCAGATAA
Upstream 100 bases:
>100_bases CGGGCGCAGCAAATCGGTAATCAAGGCCATGCATTGTAGCATGGGGTATCATGGCTTATCGCGGATGAGGCGCGCTCGAT CCGCCTGACAAGGGAACAAT
Downstream 100 bases:
>100_bases ATAAATTTTTACCGGAGCTGGCATGCGGCGGGGCTTGTTGTCATAATTGCCGCCTCCGCCAGCTTGTTACCTTAGCATGA GCTATCTGTCGATTGAATTC
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MAIYAIGDIQGCFEPFQQLLRLIDFNPGKDTLWLTGDLVNRGPQSLEVLRWVFQHQDQVEMVLGNHDLHLLAVSEGFGKI HRDDTIDDVLNAADGKVLLDWLRCQPMMLEGHGYAMVHAGLLPEWTISKALRLAEEVEFGLSGTRYREFLGRLYGNKPTR WTDDLKGVDRLRLIVNVMTRMRFLTRDGELDLSYKGELEGAPANLVPWFEAPNRRHGGTPIVCGHWSALGVHLDEDILAI DSGCLWGGSLSALRLDDKQLFSLPCQAYREIALATGR
Sequences:
>Translated_277_residues MAIYAIGDIQGCFEPFQQLLRLIDFNPGKDTLWLTGDLVNRGPQSLEVLRWVFQHQDQVEMVLGNHDLHLLAVSEGFGKI HRDDTIDDVLNAADGKVLLDWLRCQPMMLEGHGYAMVHAGLLPEWTISKALRLAEEVEFGLSGTRYREFLGRLYGNKPTR WTDDLKGVDRLRLIVNVMTRMRFLTRDGELDLSYKGELEGAPANLVPWFEAPNRRHGGTPIVCGHWSALGVHLDEDILAI DSGCLWGGSLSALRLDDKQLFSLPCQAYREIALATGR >Mature_276_residues AIYAIGDIQGCFEPFQQLLRLIDFNPGKDTLWLTGDLVNRGPQSLEVLRWVFQHQDQVEMVLGNHDLHLLAVSEGFGKIH RDDTIDDVLNAADGKVLLDWLRCQPMMLEGHGYAMVHAGLLPEWTISKALRLAEEVEFGLSGTRYREFLGRLYGNKPTRW TDDLKGVDRLRLIVNVMTRMRFLTRDGELDLSYKGELEGAPANLVPWFEAPNRRHGGTPIVCGHWSALGVHLDEDILAID SGCLWGGSLSALRLDDKQLFSLPCQAYREIALATGR
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family
Homologues:
Organism=Escherichia coli, GI1786234, Length=279, Percent_Identity=45.8781362007168, Blast_Score=244, Evalue=6e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APAH_CHRVO (Q7NQS0)
Other databases:
- EMBL: AE016825 - RefSeq: NP_903737.1 - ProteinModelPortal: Q7NQS0 - SMR: Q7NQS0 - GeneID: 2550938 - GenomeReviews: AE016825_GR - KEGG: cvi:CV_4067 - NMPDR: fig|243365.1.peg.4067 - HOGENOM: HBG724457 - OMA: LVFGHWA - PhylomeDB: Q7NQS0 - ProtClustDB: PRK00166 - BioCyc: CVIO243365:CV_4067-MONOMER - BRENDA: 3.6.1.41 - HAMAP: MF_00199 - InterPro: IPR004617 - InterPro: IPR004843 - PIRSF: PIRSF000903 - TIGRFAMs: TIGR00668
Pfam domain/function: PF00149 Metallophos
EC number: =3.6.1.41
Molecular weight: Translated: 31193; Mature: 31062
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIYAIGDIQGCFEPFQQLLRLIDFNPGKDTLWLTGDLVNRGPQSLEVLRWVFQHQDQVE CEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCHHHHHHHHHHHCCCCCEE MVLGNHDLHLLAVSEGFGKIHRDDTIDDVLNAADGKVLLDWLRCQPMMLEGHGYAMVHAG EEECCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCEEEECCCEEEEECC LLPEWTISKALRLAEEVEFGLSGTRYREFLGRLYGNKPTRWTDDLKGVDRLRLIVNVMTR CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH MRFLTRDGELDLSYKGELEGAPANLVPWFEAPNRRHGGTPIVCGHWSALGVHLDEDILAI HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCEEEE DSGCLWGGSLSALRLDDKQLFSLPCQAYREIALATGR CCCCCCCCCCCEEEECCHHHHHCCHHHHHHHHHCCCC >Mature Secondary Structure AIYAIGDIQGCFEPFQQLLRLIDFNPGKDTLWLTGDLVNRGPQSLEVLRWVFQHQDQVE EEEEECCHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCHHHHHHHHHHHCCCCCEE MVLGNHDLHLLAVSEGFGKIHRDDTIDDVLNAADGKVLLDWLRCQPMMLEGHGYAMVHAG EEECCCCEEEEEEECCCCCCCCCCCHHHHHHCCCCHHHHHHHCCCCEEEECCCEEEEECC LLPEWTISKALRLAEEVEFGLSGTRYREFLGRLYGNKPTRWTDDLKGVDRLRLIVNVMTR CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH MRFLTRDGELDLSYKGELEGAPANLVPWFEAPNRRHGGTPIVCGHWSALGVHLDEDILAI HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCEEEE DSGCLWGGSLSALRLDDKQLFSLPCQAYREIALATGR CCCCCCCCCCCEEEECCHHHHHCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14500782