| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is algI [H]
Identifier: 34499521
GI number: 34499521
Start: 4396483
End: 4397877
Strand: Reverse
Name: algI [H]
Synonym: CV_4066
Alternate gene names: 34499521
Gene position: 4397877-4396483 (Counterclockwise)
Preceding gene: 34499522
Following gene: 34499520
Centisome position: 92.57
GC content: 66.31
Gene sequence:
>1395_bases CTGTCGATTGAATTCGCCCTGGCCTTCGTCGGTTTTTTTACCGTCTACTGGGGCTGCCGCCGCATGCCCAGCATGCAGAA CCTTCTGCTCCTGCTGGCCAGCTATTTGTTCTACGCCAAGCTGGACTGGCGCTTCGCCTCCATCCTCGCCGCCTATACGC TGATCCAGCACGGCCTCAGCCGGAGGATGACGGCGTCGGCCCGTCCCAGGCGCTGGCTGCAGGCCTCGCTCGCGCTGGCG GTGGGCAATCTGGCGCTGTTCAAGTATTTCGACTTTTTCCGCGAAAGCGCGCAGGCCGGCCTCAATGCGCTGGGGGTGAC GGCGATGCTGCCCGCGCTCGATATCCTGATGCCGGTGGGCATCTCCTTCTATACCTTCCAGTCGGTCAGCTACTTGGTGT CGGTGTACCGCAAGGAAATCCGGCCGGCGGCGCTGCCGCAGTTCGCGCTGTTCCTGGCCTTTTTCCCCACCTTGCTGGCG GGGCCGATCTGCCGCGCCGGCGACCTCTTGGAGCAGCTGCGCAGCCCGGTCCGGCGCCAGGTGGCGCATCTGGACCGCGC CTTGGGCCTGATCATTCTGGCCTTGCTGAAGAAGCTGTGGCTGGCAGGCTGGCTGGCCAGCGCCTGGGTGGATCCGGTGT TCGCCGCGCCCGACACCTTCCACCGCCTGGAGGTGTGGGCGGCCTTCTACGCCTACGCGTTGCAGATCTACCTGGACTTC TCCGGCTATACCGACCTGGTCACCGCGCTGGCGCTGCTGCTGGGCATCCAGCTGCCGCGCAACTTTGATGCGCCTTACCT GGCGCTGAACCTGCGCGATTTCTGGCGGCGCTGGCACATCTCGCTGTCCAGCTGGATCCGCGACTATGTCTATATCCCGC TGGGCGGCAACCGCGGCGGCTTCGCCCGCGCCCAGATCAACCTGCTGGCGGCGATGCTGCTGTCCGGCCTGTGGCACGGC GCCAGTCTGAAATACCTGGTGTGGGGCGCGATGCATGGCCTGGGCGTGGTGGCGCTCAACATCGGCGACAAGCTGTGGCG CCGCGACGCCGTCAGCAGCGCGTCGCCATGGCTGGCGCGGCTGATCACCTTCCATTACGTGTGCCTGGCCTGGGTGTTCT TCCGCGCGCAGTCGCTGGACGAGGCGATGGACTTCCTGCGCGCGATGTTCGCGCCGTCAGGCCAGGAGCTGACCTTGAAC GCGCCGGGCCTGCTGCTGCTGCTGGGTTTGTGGCTGGCGGCGCTGCCGACGCTGTCCACGCTGCCCGAGCGCTGCTTCGG CCGGATGGCGGTGCTGCCGTGGTGGGGCAAGCCGCTGTTGCTGAGCGCGATCGCGCTGCTGGTGATCTCGCTGGCGCCGT CCGGCATTCCCGCCTTCATTTATTACCAATTCTGA
Upstream 100 bases:
>100_bases GCAACAGGCAGATAAATAAATTTTTACCGGAGCTGGCATGCGGCGGGGCTTGTTGTCATAATTGCCGCCTCCGCCAGCTT GTTACCTTAGCATGAGCTAT
Downstream 100 bases:
>100_bases CGATCCGACCTTCGCCATGCTCGCCGCCTATCCGCACCGCCGCATCCTCGTCATCCTGCTCAGCTCCATGCTGCTGCTGT TCTGGCTGGAACAGGCCGCA
Product: alginate O-acetylation protein AlgI
Products: NA
Alternate protein names: Alginate biosynthesis protein AlgI [H]
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MSIEFALAFVGFFTVYWGCRRMPSMQNLLLLLASYLFYAKLDWRFASILAAYTLIQHGLSRRMTASARPRRWLQASLALA VGNLALFKYFDFFRESAQAGLNALGVTAMLPALDILMPVGISFYTFQSVSYLVSVYRKEIRPAALPQFALFLAFFPTLLA GPICRAGDLLEQLRSPVRRQVAHLDRALGLIILALLKKLWLAGWLASAWVDPVFAAPDTFHRLEVWAAFYAYALQIYLDF SGYTDLVTALALLLGIQLPRNFDAPYLALNLRDFWRRWHISLSSWIRDYVYIPLGGNRGGFARAQINLLAAMLLSGLWHG ASLKYLVWGAMHGLGVVALNIGDKLWRRDAVSSASPWLARLITFHYVCLAWVFFRAQSLDEAMDFLRAMFAPSGQELTLN APGLLLLLGLWLAALPTLSTLPERCFGRMAVLPWWGKPLLLSAIALLVISLAPSGIPAFIYYQF
Sequences:
>Translated_464_residues MSIEFALAFVGFFTVYWGCRRMPSMQNLLLLLASYLFYAKLDWRFASILAAYTLIQHGLSRRMTASARPRRWLQASLALA VGNLALFKYFDFFRESAQAGLNALGVTAMLPALDILMPVGISFYTFQSVSYLVSVYRKEIRPAALPQFALFLAFFPTLLA GPICRAGDLLEQLRSPVRRQVAHLDRALGLIILALLKKLWLAGWLASAWVDPVFAAPDTFHRLEVWAAFYAYALQIYLDF SGYTDLVTALALLLGIQLPRNFDAPYLALNLRDFWRRWHISLSSWIRDYVYIPLGGNRGGFARAQINLLAAMLLSGLWHG ASLKYLVWGAMHGLGVVALNIGDKLWRRDAVSSASPWLARLITFHYVCLAWVFFRAQSLDEAMDFLRAMFAPSGQELTLN APGLLLLLGLWLAALPTLSTLPERCFGRMAVLPWWGKPLLLSAIALLVISLAPSGIPAFIYYQF >Mature_463_residues SIEFALAFVGFFTVYWGCRRMPSMQNLLLLLASYLFYAKLDWRFASILAAYTLIQHGLSRRMTASARPRRWLQASLALAV GNLALFKYFDFFRESAQAGLNALGVTAMLPALDILMPVGISFYTFQSVSYLVSVYRKEIRPAALPQFALFLAFFPTLLAG PICRAGDLLEQLRSPVRRQVAHLDRALGLIILALLKKLWLAGWLASAWVDPVFAAPDTFHRLEVWAAFYAYALQIYLDFS GYTDLVTALALLLGIQLPRNFDAPYLALNLRDFWRRWHISLSSWIRDYVYIPLGGNRGGFARAQINLLAAMLLSGLWHGA SLKYLVWGAMHGLGVVALNIGDKLWRRDAVSSASPWLARLITFHYVCLAWVFFRAQSLDEAMDFLRAMFAPSGQELTLNA PGLLLLLGLWLAALPTLSTLPERCFGRMAVLPWWGKPLLLSAIALLVISLAPSGIPAFIYYQF
Specific function: Together with AlgJ and AlgF, forms an inner membrane complex which probably interacts with the alginate polymerization- transport complex and adds acetyl groups at the O-2 and O-3 positions of polymannuronic acid. Acetylation of alginate is important for
COG id: COG1696
COG function: function code M; Predicted membrane protein involved in D-alanine export
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane-bound acyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004299 [H]
Pfam domain/function: PF03062 MBOAT [H]
EC number: NA
Molecular weight: Translated: 52118; Mature: 51987
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEFALAFVGFFTVYWGCRRMPSMQNLLLLLASYLFYAKLDWRFASILAAYTLIQHGLS CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRMTASARPRRWLQASLALAVGNLALFKYFDFFRESAQAGLNALGVTAMLPALDILMPVG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC ISFYTFQSVSYLVSVYRKEIRPAALPQFALFLAFFPTLLAGPICRAGDLLEQLRSPVRRQ CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VAHLDRALGLIILALLKKLWLAGWLASAWVDPVFAAPDTFHRLEVWAAFYAYALQIYLDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHEEC SGYTDLVTALALLLGIQLPRNFDAPYLALNLRDFWRRWHISLSSWIRDYVYIPLGGNRGG CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHEEEEEECCCCCC FARAQINLLAAMLLSGLWHGASLKYLVWGAMHGLGVVALNIGDKLWRRDAVSSASPWLAR CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCHHHHH LITFHYVCLAWVFFRAQSLDEAMDFLRAMFAPSGQELTLNAPGLLLLLGLWLAALPTLST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHH LPERCFGRMAVLPWWGKPLLLSAIALLVISLAPSGIPAFIYYQF HHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure SIEFALAFVGFFTVYWGCRRMPSMQNLLLLLASYLFYAKLDWRFASILAAYTLIQHGLS CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRMTASARPRRWLQASLALAVGNLALFKYFDFFRESAQAGLNALGVTAMLPALDILMPVG HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC ISFYTFQSVSYLVSVYRKEIRPAALPQFALFLAFFPTLLAGPICRAGDLLEQLRSPVRRQ CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH VAHLDRALGLIILALLKKLWLAGWLASAWVDPVFAAPDTFHRLEVWAAFYAYALQIYLDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHEEC SGYTDLVTALALLLGIQLPRNFDAPYLALNLRDFWRRWHISLSSWIRDYVYIPLGGNRGG CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHEEEEEECCCCCC FARAQINLLAAMLLSGLWHGASLKYLVWGAMHGLGVVALNIGDKLWRRDAVSSASPWLAR CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCHHHHH LITFHYVCLAWVFFRAQSLDEAMDFLRAMFAPSGQELTLNAPGLLLLLGLWLAALPTLST HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHH LPERCFGRMAVLPWWGKPLLLSAIALLVISLAPSGIPAFIYYQF HHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8636017; 10984043; 12003941; 11208804; 11179370 [H]